四川格西沟国家级自然保护区鸟类多样性初探

鸟类多样性研究是国家级自然保护区的重要工作。2020年6月—2021年5月,采用样线法和样点法,调查了四川格西沟国家级自然保护区的鸟类多样性。结果显示:结合历史文献资料,保护区共有鸟类19目56科249种。其中,国家一级重点保护动物10种,国家二级重点保护动物35种,中国特有种11种。居留型以留鸟为主,共156种(62.65%),其次是夏候鸟60种(24.10%)、旅鸟19种(7.63%)、冬候鸟14种(5.62%)。区系组成以东洋界为主,共116种(46.59%),古北界103种(41.37%)、广布种30种(12.04%)。各生态系统中森林和灌丛生态系统Shannon-Wiener指数最高,其他生态系统最低,森林和灌丛生态系统的Sorenson相似性指数最高;夏、秋季的Shannon-Wiener指数和Pielou均匀度指数最高,冬季最低。建议保护区建立长期监测体系,并持续开展鸟类保护宣传活动,加大巡护和管控力度,降低保护区内的人为干扰,同时注重鸟类所利用栖息地的保护。     

柯萨奇病毒A组9型的基因分型方法的建立

血清型别鉴定及基因分型分析是开展肠道病毒（Enterovirus,EV）分子进化特征研究的重要内容。目前为止,国内外对柯萨奇病毒A组9型（Coxsackievirus A9,CVA9）的研究主要集中在衣壳蛋白区的细胞受体结合位点及其基因特性分析,而基于全长VP1序列的基因型划分结果尚未明确。本研究依托国家手足口病监测网络,对2010-2019年全国31个省级行政区（省、自治区、直辖市）上送的18 238份手足口病样本中分离出的24株CVA9进行全长VP1区序列测定,并与GenBank中所有全长VP1区序列一起进行基因型划分研究。测序结果显示24株CVA9分离株VP1全长为906bp,编码302个氨基酸,与CVA9原型株（Griggs）核苷酸和氨基酸相似性分别为80.5%～97.6%和92.3%～99.6%。结合系统进化树和同一血清型内不同基因型的核苷酸差异界值为15%～25%,将全球CVA9划分为A-H八个基因型。进化树显示B、C和D基因型在病毒进化过程中已消失,而E、F和G基因型呈现共循环的趋势,其中G基因型包含了亚洲、北美洲、大洋洲和欧洲等9个国家的毒株,是CVA9的优势基因型。大...     

落叶阔叶林反照率的时间变化与影响因素

反照率原位测量对生态系统能量收支及其遥感应用至关重要,但目前坡面地形反照率的测量方式有局限且可见光与近红外波段反照率时间变化的差异尚不清楚。本研究以东北地区帽儿山森林生态站的落叶阔叶林为例,探究入射和反射太阳辐射(SR,300～2800 nm)、光合有效辐射(PAR,400～700 nm)、近红外辐射(NIR,700～2800 nm)的反照率时间变化特征及其影响因子,同时分析了两种辐射表安装方式反照率的差异。结果表明: 晴天SR和NIR反照率日变化呈上下午不对称的U型曲线,但PAR从早到晚递增;阴天反照率均先急剧下降后趋于稳定。平行于坡面测量增大了反照率的日均值,但缓和了SR、NIR反照率日不对称的现象。从整个生长季来看,SR、NIR与PAR反照率水平测量时最大值分别为0.16、0.27和0.11,最小值分别为0.07、0.11和0.03。SR和NIR反照率季节变化均为先增大后减小(7月为峰值),PAR则相反,SR反照率主要受NIR而不是PAR控制。各波段反照率季节变化的影响因子按照贡献率排序为宽带归一化植被指数(61.7%～78.5%,可表征叶面积指数)>太阳高度角(15.4%～36.9%)>晴空指数(0.4%～36.9%)。     

三种蚜虫的线粒体基因组数据

完整的线粒体基因组已被广泛应用于分子进化、基因组学、系统发育等方面的研究。蚜虫是一类重要的农林业害虫, 但目前公开报道的蚜虫完整线粒体基因组非常有限, 因此获得更多的基因组数据对相关研究具有重要价值。本文报道了榕毛管蚜(Greenidea ficicola)、橘二叉蚜(Aphis aurantia)和油杉纩蚜(Mindarus keteleerifoliae) 3种蚜虫的完整线粒体基因组的序列、详细注释信息、基因结构图、密码子使用情况等。该数据集可为昆虫系统发育关系、种群分化格局、害虫防治等方面的工作提供帮助。     

商代前期中原地区多品种农作物种植制度的初探：以河南新郑望京楼遗址为例

农业经济的发展是华夏文明形成的最重要的前提条件之一,郑洛地区作为夏商王朝建都和统治的核心区域,其农业经济发展状况一直是学术界研究的重点问题。相关研究表明,多品种农作物种植制度在龙山时期中原地区的出现,在华夏文明的形成过程中可能起到了至关重要的作用。为了探索这一种植制度在商代前期中原地区的具体实践情况,本文选取河南新郑望京楼遗址夏商时期（二里头文化和二里岗文化时期）29例先民肢骨和23例先民肋骨进行C、N稳定同位素分析。结果表明,先民骨胶原的δ¹³C值变化范围为-18.1‰~7.0‰,平均值为-9.5‰±2.1‰（n=52）,δ¹⁵N值变化范围为7.3‰~10.5‰,平均值为8.9‰±0.7‰（n=52）,先民仍以C₄类食物（粟黍）为主,但是也包含少量C₃类（水稻、小麦或大豆）食物,证明中原地区自龙山时代出现的多品种农作物种植制度,在商代得以延续,但是粟作农业的主导地位,始终未发生明显变化,这可能与中原地区长期以来的旱作农业经济模式习惯有关。     

犬齿窝与人类中面部骨骼的演化

犬齿窝是包括现代人类在内的许多人族成员面部骨骼的重要性状,但在分类学上的意义仍存在争议。有学者认为该性状是一个发生于基础面形的近祖性状,除了一些例外,在灭绝和现生的大猿及人属中都存在。另有学者认为,犬齿窝是仅存在于智人及其直系祖先的衍生性状,在发育上与颧齿槽突嵴有关。这种关系并非总是成立,在智人中存在着明显的差异：弧型颧齿槽突嵴和直斜型颧齿槽突嵴与犬齿窝有时共存,有时不共存。我们由此推测,犬齿窝的发生和形态与上颌窦的前部发育有关,颧齿槽突嵴的形态与鼻窦的侧面发育有关。在人类演化的过程中,犬齿窝经历了不同的变形,比如上颌沟(如南方古猿非洲种、傍人粗壮种)、上颌小窝(如傍人粗壮种)、上颌沟(如匠人)或犬齿窝缺如(如傍人埃塞俄比亚种、傍人鲍氏种、肯尼亚扁脸人、人属鲁道夫种)。犬齿窝消失的原因各类群并不相同,如中新世和早更新世人属以及中更新世人属(如人属海德堡种/人属罗得西亚种、人属尼安德特种)。人属罗得西亚种具有弱化的犬齿窝,不具备演化为智人的可能,因此被排除在智人的演化支之外。     

郑州青台遗址新石器时代中晚期人群龋齿的统计与分析

本文通过对郑州青台遗址新石器时代中晚期91例个体、1913枚牙齿罹患龋齿的统计与分析可知,青台人群患龋率为71.43%,龋齿率为13.38%。其中,龋齿率女性高于男性,可能与女性孕期生理变化、食物选择及性别分工等有关。上颌龋齿率高于下颌,臼齿及咬合面为龋齿易患齿类及部位。通过对比可知青台人群显示出较高的龋齿罹患率,暗示该人群饮食中应包含较多的碳水化合物类食物,这可能与新石器时代中晚期黄河中游发达的旱作农业有关。此外,龋齿率在黄河及长江中、下游新石器时代农业人群中的区域性差异可能与龋病病因的复杂性和各地区不同的文化面貌、人群生活方式有关。     

The Effects of Heart Rate Variability (HRV) Biofeedback on HRV Reactivity and Recovery During and After Anger Recall Task for Patients with Coronary Artery Disease

Patients with coronary artery disease (CAD) often experience anger events before cardiovascular events. Anger is a psychological risk factor and causes underlying psychophysiological mechanisms to lose balance of the autonomic nervous system (ANS). The heart rate variability (HRV) was the common index for ANS regulation. It has been confirmed that heart rate variability biofeedback (HRV-BF) restored ANS balance in patients with CAD during the resting state. However, the effects of HRV-BF during and after the anger event remain unknown. This study aimed to examine the effects of HRV-BF on ANS reactivity and recovery during the anger recall task in patients with CAD. This study was a randomized control trial with a wait-list control group design, with forty patients in the HRV-BF group (for six sessions) and 44 patients in the control group. All patients received five stages of an anger recall task, including baseline, neutral recall task, neutral recovery, anger recall task, and anger recovery. HRV reactivity in the HRV-BF group at the post-test was lower than that in the control group. HRV recovery at the post-test in the HRV-BF group was higher than that in the control group. The HRV-BF reduced ANS reactivity during anger events and increased ANS recovery after anger events for CAD patients. The possible mechanisms of HRV-BF may increase total HRV, ANS regulation, and baroreflex activation at anger events for patients with CAD, and may be a suitable program for cardiac rehabilitation.

     

Structures of SARS-CoV-2 spike protein alert noteworthy sites for the potential approaching variants

Highlights
1 Deletion of residues 156–157 warps the neighboring beta-sheet and leads NTD and RBD to shift.
2 T859N stabilizes the packing of the 630 loop motif to make RBD standing transition more difficult.
3 The overall structures of the closed state S complex from different variants resemble each other.
4 Mutations in FPPR may affect the overall structure of the trimeric spike protein.     

Generation and functional characterisation of Plasmodium yoelii csp deletion mutants using a microhomology-based CRISPR/Cas9 method

CRISPR/Cas9 is a powerful genome editing method that has greatly facilitated functional studies in many eukaryotic organisms including malaria parasites. Due to the lack of genes encoding enzymes necessary for the non-homologous end joining DNA repair pathway, genetic manipulation of malaria parasite genomes is generally accomplished through homologous recombination requiring the presence of DNA templates. Recently, an alternative double-strand break repair pathway, microhomology-mediated end joining, was found in the Plasmodium falciparum parasite. Taking advantage of the MMEJ pathway, we developed a MMEJ-based CRISPR/Cas9 (mCRISPR) strategy to efficiently generate multiple mutant parasites simultaneously in genes with repetitive sequences. As a proof of principle, we successfully produced various size mutants in the central repeat region of the Plasmodium yoelii circumsporozoite surface protein without the use of template DNA. Monitoring mixed parasite populations and individual parasites with different sizes of CSP-CRR showed that the CSP-CRR plays a role in the development of mosquito stages, with severe developmental defects in parasites with large deletions in the repeat region. However, the majority of the csp mutant parasite clones grew similarly to the wild type P. yoelii 17XL parasite in mice. This study develops a useful technique to efficiently generate mutant parasites with deletions or insertions, and shows that the CSP-CRR plays a role in parasite development in mosquito.