TELOCYTES IN ENDOCARDIUM: Electron Microscope Evidence

The term TELOCYTES was very recently introduced, for replacing the name Interstitial Cajal‐Like Cells (ICLC). In fact, telocytes are not really Cajal‐like cells, they being different from all other interstitial cells by the presence of telopodes, which are cell‐body prolongations, very thin (under the resolving power of light microscopy), extremely long (tens up to hundreds of micrometers), with a moniliform aspect (many dilations along), and having caveolae. The presence of telocytes in epicardium and myocardium was previously documented. We present here electron microscope images showing the existence of telocytes, with telopodes, at the level of mouse endocardium. Telocytes are located in the subendothelial layer of endocardium, and their telopodes are interposed in between the endocardial endothelium and the cardiomyocytes bundles. Some telopodes penetrate from the endocardium among the cardiomyocytes and surround them, eventually. Telopodes frequently establish close spatial relationships with myocardial blood capillaries and nerve endings. Because we may consider endocardium as a ‘blood–heart barrier’, or more exactly as a ‘blood–myocardium barrier’, telocytes might have an important role in such a barrier being the dominant cell population in subendothelial layer of endocardium.     

基于陈述性偏好法的三江平原湿地生态保护价值比较

陈述性偏好法是当前用于评估环境物品非市场价值的主要方法,包括条件价值评估法(CVM)和选择实验(CE).本文利用陈述性偏好法对三江平原湿地的生态保护价值进行评估,基于随机效用理论构建陈述性偏好方法的支付意愿评价模型,求出基于CVM与CE的三江平原湿地生态保护价值的支付意愿(WTP).结果表明: 基于CE的平均支付意愿为每年379元,不同选择属性的边际支付意愿分别是水源涵养为每年114.00元,湿地面积为每年72.55元,自然景观为每年59.55元,生物多样性为每年37.09元;CVM的平均支付意愿为每年134元.分析支付意愿的影响因素,并对受访者拒绝支付原因进行探讨.CE方法得到受访者的支付意愿显著高于CVM方法,社会经济属性中受教育程度和个人平均年收入与受访者的支付意愿呈显著正相关,而拒绝支付原因没有显著差异.CE可以进行多属性、多水平分析,求出湿地各选择属性的支付意愿,因此CE比CVM更能揭示受访者的偏好信息,其评估结果更接近于实际.     

一种基于多特征的大肠杆菌启动子判别算法

主要对从一段DNA序列中提取出信息以判别其中是否含有启动子的问题进行了研究。首先从固定长度的序歹4中提取成分特征和结构特征,然后将这些特征输入到一个非线性分类器中进行判别。测试结果显示,在正集＆非编码区负集中,平均错误率降低为13．4％;在正集＆编码区负集中,平均错误率降低到17．0％。表明该方法是非常有效的。     

科尔沁沙地典型固沙人工林地土壤水分时空特征及其对环境因子的响应

土壤水分时空动态特征对于干旱地区人工林的可持续经营与管理起着至关重要的作用。以位于科尔沁沙地南缘的樟子松和柠条固沙人工林为对象,于2018年11月-2019年11月连续观测了林地0-200 cm土壤剖面的含水量、温度及微气象因子,系统分析了土壤水分的时空变化特征及其对环境因子的响应。研究期内,两种林地土壤水分的季节变化可分为冻结期、补充期、消耗期和稳定期;依据土壤剖面的水分特征可分为易变层、活跃层和稳定层,但两种林地的分层深度有一定差异。在生长季内（5-10月）,土壤含水量对大气降雨的响应随着土层深度的增加而减弱;降雨对樟子松人工林0-20 cm层土壤水分的影响极显著（P<0.01）,对柠条人工林0-10 cm层的影响极显著（P<0.01）、20-60 cm层显著（P<0.05）。在土壤冻融周期内（2018年11月-2019年4月）,两种林地的土壤均表现为"单向冻结"和"双向融化"的特点;土壤温度是影响冻融期内土壤含水量的关键因素,两者呈极显著的指数函数关系;樟子松和柠条人工林土壤的最大冻结深度分别为170 cm和190 cm,前者10 cm土层解冻时间要比后者晚11 d,可能与乔木树冠的遮阴作用有关。潜在蒸散与柠条林0-60 cm层、樟子松林0-20 cm和200 cm层的土壤水分呈极显著相关（P<0.01）,而与樟子松林60 cm和160 cm层呈显著相关（P<0.05）,这与树木蒸腾和土壤蒸发等综合作用有关。研究表明,由于两种人工林的树种组成、树冠大小、郁闭程度和根系分布等结构特征不同会导致林地土壤水分时空特征的异质性及其对环境因素响应的差异。     

Lineage specific evolution of the VNTR composite retrotransposon central domain and its role in retrotransposition of gibbon LAVA elements

Background

VNTR (Variable Number of Tandem Repeats) composite retrotransposons - SVA (SINE-R-VNTR-Alu), LAVA (LINE-1-Alu-VNTR-Alu), PVA (PTGR2-VNTR-Alu) and FVA (FRAM-VNTR-Alu) - are specific to hominoid primates. Their assembly, the evolution of their 5’ and 3’ domains, and the functional significance of the shared 5’ Alu-like region are well understood. The central VNTR domain, by contrast, has long been assumed to represent a more or less random collection of 30-50 bp GC-rich repeats. It is only recently that it attracted attention in the context of regulation of SVA expression.

Results

Here we provide evidence that the organization of the VNTR is non-random, with conserved repeat unit (RU) arrays at both the 5’ and 3’ ends of the VNTRs of human, chimpanzee and orangutan SVA and gibbon LAVA. The younger SVA subfamilies harbour highly organized internal RU arrays. The composition of these arrays is specific to the human/chimpanzee and orangutan lineages, respectively. Tracing the development of the VNTR through evolution we show for the first time how tandem repeats evolve within the constraints set by a functional, non-autonomous non-LTR retrotransposon in two different families - LAVA and SVA - in different hominoid lineages. Our analysis revealed that a microhomology-driven mechanism mediates expansion/contraction of the VNTR domain at the DNA level.Elements of all four VNTR composite families have been shown to be mobilized by the autonomous LINE1 retrotransposon in trans. In case of SVA, key determinants of mobilization are found in the 5’ hexameric repeat/Alu-like region. We now demonstrate that in LAVA, by contrast, the VNTR domain determines mobilization efficiency in the context of domain swaps between active and inactive elements.

Conclusions

The central domain of VNTR composites evolves in a lineage-specific manner which gives rise to distinct structures in gibbon LAVA, orangutan SVA, and human/chimpanzee SVA. The differences observed between the families and lineages are likely to have an influence on the expression and mobilization of the elements.

Electronic supplementary material

The online version of this article (doi:10.1186/s12864-015-1543-z) contains supplementary material, which is available to authorized users.     

Enhanced cortical excitability in grapheme-color synesthesia and its modulation

Synesthesia is an unusual condition characterized by the over-binding of two or more features and the concomitant automatic and conscious experience of atypical, ancillary images or perceptions. Previous research suggests that synesthetes display enhanced modality-specific perceptual processing, but it remains unclear whether enhanced processing contributes to conscious awareness of color photisms. In three experiments, we investigated whether grapheme-color synesthesia is characterized by enhanced cortical excitability in primary visual cortex and the role played by this hyperexcitability in the expression of synesthesia. Using transcranial magnetic stimulation, we show that synesthetes display 3-fold lower phosphene thresholds than controls during stimulation of the primary visual cortex. We next used transcranial direct current stimulation to discriminate between two competing hypotheses of the role of hyperexcitability in the expression of synesthesia. We demonstrate that synesthesia can be selectively augmented with cathodal stimulation and attenuated with anodal stimulation of primary visual cortex. A control task revealed that the effect of the brain stimulation was specific to the experience of synesthesia. These results indicate that hyperexcitability acts as a source of noise in visual cortex that influences the availability of the neuronal signals underlying conscious awareness of synesthetic photisms.     

EM复合菌对新疆色素辣椒生长及根际细菌群落的影响

【背景】Effective microorganisms （EM）复合菌在我国农业种植上的应用越来越广泛,但对色素辣椒的促生作用与根际细菌群落结构的影响未见报道。【目的】评估EM复合菌对新疆色素辣椒的促生长作用,并分析其对色素辣椒根际细菌群落组成的影响。【方法】通过随水灌溉方式将EM复合菌接种到色素辣椒根部,在收获期测定辣椒生长指标、土壤养分和酶活活性,明确EM复合菌对辣椒生长和土壤质量的影响;利用16S rRNA基因高通量测序技术测定EM复合菌对辣椒根系细菌群落组成和结构的影响。【结果】与对照组相比,EM复合菌的施用使辣椒株高、鲜重、单个果重和单株结果数分别提高23.89%、85.41%、42.31%和46.04%;土壤中碱解氮和速效磷含量分别提高5.83%和13.39%,土壤中脲酶、蔗糖酶和过氧化物酶的活性分别提高11.47%、9.42%和21.43%;施用EM复合菌显著改变辣椒根际微生物群落的α多样性和β多样性,提高有益菌群变形菌门（Proteobacteria）、酸杆菌门（Acidobacteria）、芽单胞菌门（Gemmatimonadetes）、放线菌门（Actinobacteria）和厚壁菌门（Firmicutes）的相对丰度,其中变形菌门黄单胞菌科（Xanthomonadaceae）的相对丰度增加119.32%;在属的水平上,施用EM复合菌显著增加了藤黄色杆菌属（Luteitalea）、藤黄单胞菌属（Luteimonas）、鞘脂单胞菌属（Sphingobacterium）和盐单胞菌属（Halomonas）的相对丰度,尤其是藤黄单胞菌属的丰度提高244.17%,同时显著降低黄杆菌属（Flavobacterium）的相对丰度。此外,与土壤理化指标呈正相关的微生物菌群相对丰度也显著升高。【结论】EM复合菌能够通过提高土壤营养成分与酶活活性,调控根系微生物群落结构,富集大量在盐碱地生存能力较强的有益菌群,进而起到促进色素辣椒生长的功效。     

Automation of gene assignments to metabolic pathways using high-throughput expression data

Background  

Accurate assignment of genes to pathways is essential in order to understand the functional role of genes and to map the existing pathways in a given genome. Existing algorithms predict pathways by extrapolating experimental data in one organism to other organisms for which this data is not available. However, current systems classify all genes that belong to a specific EC family to all the pathways that contain the corresponding enzymatic reaction, and thus introduce ambiguity.     

周期节律与肿瘤关系的分子机理

周期节律是由内在时钟系统介导的多重生物过程的周期循环.周期节律系统是由位于大脑的视神经交叉上核的中央时钟系统和位于外周的几乎存在于所有细胞的外周时钟系统组成的.中央时钟与外周时钟都能够对生物体的生理过程进行调控,如激素的分泌、能量代谢、细胞增殖、DNA损伤修复等.而周期节律基因的表达失调,对其下游靶基因包括细胞周期相关基因的表达,以及细胞抗凋亡能力等产生重要的影响.而这一结果会导致细胞增殖加速及基因组不稳定,并可能促进肿瘤的发生.许多实验证据表明,肿瘤是一种节律相关的生理失调,在许多肿瘤中都发现周期节律遭到破坏,如乳腺癌、前列腺癌、子宫内膜癌等.本文将从周期节律对细胞周期进程及对细胞DNA损伤修复的影响来讨论分子水平上细胞的周期节律与肿瘤发生发展的关系.