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41.
Gene identification in a complex chromosomal continuum by local genomic cross-referencing 总被引:8,自引:0,他引:8
Zoya Avramova Alexander Tikhonov Phillip SanMiguel Young-Kwan Jin Changnong Liu Sung-Sick Woo Rod A. Wing Jeffrey L. Bennetzen 《The Plant journal : for cell and molecular biology》1996,10(6):1163-1168
Most higher plants have complex genomes containing large quantities of repetitive DNA interspersed with low-copy-number sequences. Many of these repetitive DNAs are mobile and have homology to RNAs in various cell types. This can make it difficult to identify the genes in a long chromosomal continuum. It was decided to use genic sequence conservation and grass genome co-linearity as tools for gene identification. A bacterial artificial chromosome (BAC) clone containing sorghum genomic DNA was selected using a maize Adh1 probe. The 165 kb sorghum BAC was tested for hybridization to a set of clones representing the contiguous 280 kb of DNA flanking maize Adh1. None of the repetitive maize DNAs hybridized, but most of the low-copy-number sequences did. A low-copy-number sequence that did cross-hybridize was found to be a gene, while one that did not was found to be a low-copy-number retrotransposon that was named Reina. Regions of cross-hybridization were co-linear between the two genomes, but closer together in the smaller sorghum genome. These results indicate that local genomic cross-referencing by hybridization of orthologous clones can be an efficient and rapid technique for gene identification and studies of genome organization. 相似文献
42.
Rudge Simon A. Hughes Phillip J. Brown Graham R. Michell Robert H. Kirk Christopher J. 《Molecular and cellular biochemistry》1995,149(1):161-174
Molecular and Cellular Biochemistry - The testis is a complex organ in which local control is achieved by signalling between its constituent cells. Herein we describe the responses of cultured rat... 相似文献
43.
Phillip A Patten Russell J Howard Willem PC Stemmer 《Current opinion in biotechnology》1997,8(6):724-733
DNA shuffling is a practical process for directed molecular evolution which uses recombination to dramatically accelerate the rate at which one can evolve genes. Single and multigene traits that require many mutations for improved phenotypes can be evolved rapidly. DNA shuffling technology has been significantly enhanced in the past year, extending its range of applications to small molecule pharmaceuticals, pharmaceutical proteins, gene therapy vehicles and transgenes, vaccines and evolved viruses for vaccines, and laboratory animal models. 相似文献
44.
Neville I. Passmore Robert R. Capranica Stephen R. Telford Phillip J. Bishop 《Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology》1984,154(2):189-197
Summary A detailed study was conducted of the three-dimensional accuracy of phonotaxis by femaleHyperolius marmoratus. This analysis involved videotape recordings of phonotactic approaches to an elevated loudspeaker through a three-dimensional grid. Females readily resolved the sound source elevation, but the jump error angles describing the precision of approach were considerably greater in this three-dimensional analysis than in the more conventional two-dimensional ground approach analysis. Extensive use was made of visual cues in elevated phonotactic approach and lateral head scanning prior to jumps, often accompanied by vertical changes in head orientation, was frequent. The ability of such small anurans to localize a sound source in both the horizontal and vertical plane is remarkable.On leave from the Section of Neurobiology and Behavior, Cornell University, Ithaca, New York 14853, USA 相似文献
45.
Comparison of metal levels in invertebrate detritivores and their natural diets: Concentration factors reassessed 总被引:2,自引:0,他引:2
Phillip Williamson 《Oecologia》1979,44(1):75-79
Summary Concentration Factors (ppm in animal: ppm in diet) are presented for lead, zinc and cadmium in the snail Cepaea hortensis, and for lead and zinc in the woodlice Oniscus asellus and Philoscia muscorum, sampled at roadside sites. For each species such factors were found to be extremely variable, affected not only by season, and size and/or age of animals, but also by the choice of data used in estimating metal levels in the diet. It is concluded that factors other than seasonal changes in metal levels of senescent vegetation are primarily responsible for withinsite variation in the lead, zinc and cadmium concentrations of invertebrate detritivores. 相似文献
46.
The in vitro mitogenic response to PHA and Con A was determined in three inbred lines of chickens. Lymphocytes from one line consistently showed a greater stimulation by PHA than the other two lines. Analysis of F1 crosses and backcrosses indicated that this quantitative difference was controlled by more than one gene. More substantial differences in Con-A stimulation were also observed between the three lines, and the data indicated that separate genetic systems were controlling the variation in PHA and Con-A stimulation. Analysis of F1 crosses, backcrosses and assortative matings between backcrosses revealed that the variation in Con-A stimulation was controlled by at least two major genes, one of which may be linked to the major histocompatibility complex. Surprisingly, one line appeared to be segregating for Con-A stimulation in spite of an inbreeding coefficient greater than 0.98. 相似文献
47.
Fine, almost single cell, suspensions were produced from both existing suspension cultures containing large cell clumps and
from chopped callus pieces by immobilizing the cells in 4–5 mm diameter calcium alginate beads. The immobilized cells continued
to divide inside the beads and at the bead surface, and after 2–3 weeks' culture, fine cell suspensions were formed as a result
of loss of the surface cells into the medium. After removal of the cell suspensions by filtration, subsequent culture of the
beads in fresh medium resulted in the further production of homogeneous cell suspensions after 1–2 weeks. In this way an almost
continuous supply of fine cell suspensions could be obtained from cultures containing large clumps of cells. The cells produced
by this method remained in this state for at least one culture period, although in some instances repeated subculture resulted
in an increase in the size of cell groups. The technique has been successfully applied to the production of fine cell suspensions
ofCatharanthus roseus, Nicotiana tabacum andDaucus carota. 相似文献
48.
Veronica M. Maher J. Justin McCormick Phillip L. Grover Peter Sims 《Mutation research》1977,43(1):117-137
The cytotoxicity of the “K-region” epoxides as well as several other reactive metabolites or chemical derivatives of polycyclic hydrocarbons was compared in normally-repairing human diploid skin fibroblasts and in fibroblasts from a classical xeroderma pigmentosum (XP) patient (XP2BE) whose cells have been shown to carry out excision repair of damage induced in DNA by ultraviolet (UV) radiation at a rate approx. 20% that of normal cells. Each compound tested exhibited a 2- to 3-fold greater cytotoxicity in this XP strain than in the normal strain. To determine whether this difference in survival reflected a difference in the capacity of the strains to repair DNA damage caused by such hydrocarbon derivatives, we compared the cytotoxic effect of several “K-region” epoxides in two additional XP strains, each with a different capacity for repair of UV damage. The ration of the slopes of the survival curves for each of the XP strains to that of the normal strain, following exposure to each epoxide, was very similar to that which we had previously determined for their respective UV curves, suggesting that human cells repair damage induced in DNA by exposure to hydrocarbon derivatives with the same system used for UV-induced lesions.To determine whether the deficiency in rate of excision repair in this classical XP strain (XP2BE) causes such cells to be abnormally susceptible to mutations induced by “K-region” epoxides of polycyclic hydrocarbons, we compared them with normal cells for the frequency of induced mutations to 8-azaguanine resistance. The XP cells were two to three times more susceptible to mutations induced by the “K-region” epoxide of benzo(a)pyrene (BP), 7,12-dimethylbenz(a)anthracene (DMBA), and dibenz(a,h)anthracene (DBA). Evidence also was obtained that cells from an XP variant patient are abnormally susceptible to mutations induced by hydrocarbon epoxides and, as is the case following exposure to UV, are abnormally slow in converting low molecular weight DNA, synthesized from a template following exposure to hydrocarbon epoxides, into large-size DNA. 相似文献
49.
50.