Neural network modelling of fermentation processes. Microorganisms cultivation model

In the present paper the problem of chemostat modelling using the neural networks techniques is considered. A feedforward neural network with time delay feedback connections from and to the output neurons, which take into account the culture memory is proposed. A model of the growth of a strain Saccharomyces cerevisiae on a glucose limited medium is developed. Simulation investigations are carried out. The results are discussed.     

Strain-specific fingerprints of Rhizobium galegae generated by PCR with arbitrary and repetitive primers

Strain-specific genomic patterns of Rhizobium galegae were generated by PCR using both arbitrary and repetitive (BOX, ERIC and REP) primers. The identification of the strains was achieved also by RFLP analysis. However, the PCR genomic fingerprinting has significant advantages: it is not only simpler and faster, but it is also much more discriminative because it deals with the full bacterial genome and not only with parts of it as is the case with RFLP. In addition, both kinds of PCR fingerprinting (using arbitrary or repetitive primers) generated highly specific and reproducible patterns when parallel reactions with total bacterial DNA, extracted from independent liquid cultures were performed. The latter shows that AP- and rep-PCR are convenient for controlling the production and application of Rhizobium inoculants.     

Early Deсline in Rat Soleus Passive Tension with Hindlimb Unloading: Inactivation of Cross-bridges or Activation of Calpains?

The study was aimed at testing the hypotheses about the role of cross-bridges and calpains in reduction of rat soleus passive tension under conditions of hindlimb unloading. For this purpose, we used an inhibitor of μ-calpain PD 150606 as well as a blocker of actomyosin interaction (blebbistatin). It was found for the first time that a decrease in passive tension of rat soleus after 3-day hindlimb unloading is associated with the activity of μ-calpain and does not depend on the processes of cross-bridges formation.     

Homodimerization of the Wnt Receptor DERAILED Recruits the Src Family Kinase SRC64B

Ryk pseudokinase receptors act as important transducers of Wnt signals, particularly in the nervous system. Little is known, however, of their interactions at the cell surface. Here, we show that a Drosophila Ryk family member, DERAILED (DRL), forms cell surface homodimers and can also heterodimerize with the two other fly Ryks, DERAILED-2 and DOUGHNUT ON 2. DERAILED homodimerization levels increase significantly in the presence of its ligand, WNT5. In addition, DERAILED displays ligand-independent dimerization mediated by a motif in its transmembrane domain. Increased dimerization of DRL upon WNT5 binding or upon the replacement of DERAILED''s extracellular domain with the immunoglobulin Fc domain results in an increased recruitment of the Src family kinase SRC64B, a previously identified downstream pathway effector. Formation of the SRC64B/DERAILED complex requires SRC64B''s SH2 domain and DERAILED''s PDZ-binding motif. Mutations in DERAILED''s inactive tyrosine kinase-homologous domain also disrupt the formation of DERAILED/SRC64B complexes, indicating that its conformation is likely important in facilitating its interaction with SRC64B. Finally, we show that DERAILED''s function during embryonic axon guidance requires its Wnt-binding domain, a putative juxtamembrane extracellular tetrabasic cleavage site, and the PDZ-binding domain, indicating that DERAILED''s activation involves a complex set of events including both dimerization and proteolytic processing.     

Antimicrobial Activity of Geometric Isomers of Etherolenic Acid—the Products of Plant Lipoxygenase Cascade

Data on the influence of the double bond geometry on the antimicrobial properties of different isomers of etherolenic acid against phytopathogenic bacteria are presented. (ω5Z)-Etherolenic acid possesses bactericidal properties against Xanthomonas campestris ssp. vesicatoria, Pseudomonas syringae ssp. tomato, Pectobacterium atrosepticum SCRI1043; the etherolenic and (11Z)-etherolenic acids possess only bacteriostatic properties.     

Biodiesel fuel production by Aspergillus niger whole-cell biocatalyst in optimized medium

Methanolysis of sunflower oil catalyzed by immobilized Aspergillus niger mycelium was studied in a packed-bed reactor. The optimal cultivation parameters for A. niger were determined using full factorial and steepest ascent experimental designs. Sunflower oil, yeast extract and soybean meal were selected as the best carbon and nitrogen sources and were used in the subsequent experiments. Intracellular lipase activity and cell mass concentration were respectively 3.2 and 2.4 times greater and cultivation period decreased by 24 h compared with the initial medium. The optimum values of these most significant parameters were as follows: sunflower oil (13.2 g/L), yeast extract (6.2 g/L), soybean meal (7.4 g/L) and incubation period (72 h) at 30 °C. With A. niger biocatalyst grown in optimized conditions, the biodiesel fuel yield reached 23.1% after sixth pass of recycled reaction mixture through the reactor.