A Public Sentiment Index for Ecosystem Management

Although ecosystem-based management can lead to sustainable resource use, its successful implementation depends on stakeholders’ acceptance. A framework to integrate scientific knowledge about the ecosystems with stakeholders’ preferences is therefore needed. We propose here a ‘Public Sentiment Index,’ or PSI, as an integration framework that combines an ecosystem model (Ecopath with Ecosim; EwE) with a public choice model (the damage schedule). Using Chesapeake Bay as a case study, we demonstrate the development of the PSI, based on judgments of Bay stakeholders, including ‘watermen’ (commercial fishers), seafood wholesalers and retailers, recreational fishers, representatives from non-governmental organizations, scientists and managers on a range of Bay ecosystems. The high PSI for Chesapeake Bay suggests a consensus amongst Bay stakeholders who, understanding the need for restoring the Bay ecosystem, may accept difficult policy choices and support their implementation.     

Pectin May Hinder the Unfolding of Xyloglucan Chains during Cell Deformation： Implications of the Mechanical Performance of Arabidopsis Hypocotyls with Pectin Alterations

Plant cell walls, like a multitude of other biological materials, are natural fiber-reinforced composite materials. Their mechanical properties are highly dependent on the interplay of the stiff fibrous phase and the soft matrix phase and on the matrix deformation itself. Using specific Arabidopsis thaliana mutants, we studied the mechanical role of the matrix assembly in primary cell walls of hypocotyls with altered xyloglucan and pectin composition. Standard microtensile tests and cyclic loading protocols were performed on tour1 hypocotyls with affected RGII borate diester cross-links and a hindered xyloglucan fucosylation as well as qua2 exhibiting 50% less homogalacturonan in comparison to wild-type. As a control, wild-type plants （Col-0） and mur2 exhibiting a specific xyloglucan fucosylation and no differences in the pectin network were utilized. In the standard tensile tests, the ultimate stress levels （-tensile strength） of the hypocotyls of the mutants with pectin alterations （mur1, qua2） were rather unaffected, whereas their tensile stiffness was noticeably reduced in comparison to Col-0. The cyclic loading tests indicated a stiffening of all hypocotyls after the first cycle and a plastic deformation during the first straining, the degree of which, however, was much higher for tour1 and qua2 hypocotyls. Based on the mechanical data and current cell wall models, it is assumed that folded xyloglucan chains between cellulose fibrils may tend to unfold during straining of the hypocotyls. This response is probably hindered by geometrical constraints due to pectin rigidity.     

Structuring dynamic models of exploited ecosystems from trophic mass-balance assessments

The linear equations that describe trophic fluxes in mass-balance, equilibrium assessments of ecosystems (such as in the ECOPATH approach) can be re-expressed as differential equations defining trophic interactions as dynamic relationships varying with biomasses and harvest regimes. Time patterns of biomass predicted by these differential equations, and equilibrium system responses under different exploitation regimes, are found by setting the differential equations equal to zero and solving for biomasses at different levels of fishing mortality. Incorporation of our approach as the ECOSIM routine into the well-documented ECOPATH software will enable a wide range of potential users to conduct fisheries policy analyses that explicitly account for ecosystem trophic interactions, without requiring the users to engage in complex modelling or information gathering much beyond that required for ECOPATH. While the ECOSIM predictions can be expected to fail under fishing regimes very different from those leading to the ECOPATH input data, ECOSIM will at least indicate likely directions of biomass change in various trophic groups under incremental experimental policies aimed at improving overall ecosystem management. That is, ECOSIM can be a valuable tool for design of ecosystem-scale adaptive management experiments     

Enzymatic sequence-specific spin labeling of a DNA fragment containing the recognition sequence of EcoRI endonuclease

Deoxyuridine analogs spin labeled in position 5 have been enzymatically incorporated sequence specifically into an oligodeoxyribonucleotide to form a spin-labeled 26-mer. The 26-mer contains the EcoRI-binding site and two labels which are located symmetrically close to the binding site. The labels are separated from one another far beyond the Heisenberg spin-exchange distance. The local base motion as determined by ESR spectroscopy is of the order of 4 ns in the oligonucleotide duplex. This is the same value as reported earlier for local T motions in polynucleotide duplexes, thereby providing direct experimental evidence that the ESR line shape of spin levels covalently attached to nucleic acids depends primarily on the local dynamics of the nucleic acid building blocks.     

IgY Technology: Extraction of Chicken Antibodies from Egg Yolk by Polyethylene Glycol (PEG) Precipitation

Hens can be immunized by means of i.m. vaccination (Musculus pectoralis, left and right, injection volume 0.5-1.0 ml) or by means of Gene-Gun plasmid-immunization. Dependent on the immunogenicity of the antigen, high antibody-titres (up to 1:100,000 - 1:1,000,000) can be achieved after only one or 3 - 4 boost immunizations. Normally, a hen lays eggs continuously for about 72 weeks, thereafter the laying capacity decreases. This protocol describes the extraction of total IgY from egg yolk by means of a precipitation procedure (PEG. Polson et al. 1980). The method involves two important steps. The first one is the removal of lipids and the second is the precipitation of total IgY from the supernatant of step one. After dialysis against a buffer (normally PBS) the IgY-extract can be stored at -20°C for more than a year. The purity of the extract is around 80 %, the total IgY per egg varies from 40-80 mg, dependent on the age of the laying hen. The total IgY content increases with the age of the hen from around 40 mg/egg up to 80 mg/egg (concerning PEG precipitation). The laying capacity of a hen per year is around 325 eggs. That means a total potential harvest of 20 g total IgY/year based on a mean IgY content of 60 mg total IgY/egg (see Table 1).     

Immediate x-radiation induced contractions of the isolated guinea pig terminal ileum: The localization of the effect by drugs

Summary Tone and motility of the isolated guinea pig ileum were increased by irradiation with a dose of 10 krd. The maximal effect corresponds to that induced by 0.001 µg/ml acetylcholine or 0.3 µg/ml nicotine. The pharmacological analysis of this effect performed with acetylcholine and nicotine and several blocking agents including hexamethonium, atropine, tetrodotoxin, diphenhydramine, and verapamil suggests that radiation acts on the postganglionic parasympathetic neuron and the neuromuscular synapse. The mechanism of radiation is likely to consist of both an increased release of acetylcholine from the postganglionic neuron and a sensibilization of the cholinergic receptor site at the smooth muscle cell. The latter effect is thought to result from an increased contractile action induced by acetylcholine or nicotine in the irradiated ileal smooth muscle.     

Rapid structural phenotyping of plant cell wall mutants by enzymatic oligosaccharide fingerprinting

Various biochemical, chemical, and microspectroscopic methods have been developed throughout the years for the screening and identification of mutants with altered cell wall structure. However, these procedures fail to provide the insight into structural aspects of the cell wall polymers. In this paper, we present various methods for rapidly screening Arabidopsis cell wall mutants. The enzymatic fingerprinting procedures using high-performance anion-exchange-pulsed-amperometric detection liquid chromatography, fluorophore-assisted carbohydrate electrophoresis, and matrix-assisted laser-desorption ionization time of flight (MALDI-TOF) mass spectrometry (MS) were exemplified by the structural analysis of the hemicellulose xyloglucan. All three techniques are able to identify structural alterations of wall xyloglucans in mur1, mur2, and mur3, which in comparison with the wild type have side chain defects in their xyloglucan structure. The quickest analysis was provided by MALDI-TOF MS. Although MALDI-TOF MS per se is not quantitative, it is possible to reproducibly obtain relative abundance information of the various oligosaccharides present in the extract. The lack of absolute quantitation by MALDI-TOF MS was compensated for with a xyloglucan-specific endoglucanase and simple colorimetric assay. In view of the potential for mass screening using MALDI-TOF MS, a PERL-based program was developed to process the spectra obtained from MALDI-TOF MS automatically. Outliers can be identified very rapidly according to a set of defined parameters based on data collected from the wild-type plants. The methods presented here can easily be adopted for the analysis of other wall polysaccharides. MALDI-TOF MS offers a powerful tool to screen and identify cell wall mutants rapidly and efficiently and, more importantly, is able to give initial insights into the structural composition and/or modification that occurs in these mutants.     

A xyloglucan-specific endo-beta-1,4-glucanase from Aspergillus aculeatus: expression cloning in yeast, purification and characterization of the recombinant enzyme

A full-length c-DNA encoding a xyloglucan-specific endo -beta-1, 4-glucanase (XEG) has been isolated from the filamentous fungus Aspergillusaculeatus by expression cloning in yeast. The colonies expressingfunctional XEG were identified on agar plates containing azurine-dyedcross-linked xyloglucan. The cDNA encoding XEG was isolated, sequenced,cloned into an Aspergillus expression vector, and transformed intoAspergillus oryzae for heterologous expression. The recombinant enzyme waspurified to apparent homogeneity by anion- exchange and gel permeationchromatography. The recombinant XEG has a molecular mass of 23,600, anisoelectric point of 3.4, and is optimally stable at a pH of 3.4 andtemperature below 30 degreesC. The enzyme hydrolyzes structurally diversexyloglucans from various sources, but hydrolyzes no other cell wallcomponent and can therefore be considered a xyloglucan-specific endo-beta-1, 4-glucanohydrolase. XEG hydrolyzes its substrates with retentionof the anomeric configuration. The Kmof the recombinant enzyme is 3.6mg/ml, and its specific activity is 260 micromol/min per mg protein. Theenzyme was tested for its ability to solubilize xyloglucan oligosaccharidesfrom plant cell walls. It was shown that treatment of plant cell walls withXEG yields only xyloglucan oligosaccharides, indicating that this enzymecan be a powerful tool in the structural elucidation of xyloglucans.     

渤海生态通道模型初探

生态通道模式（Ｅｃｏｐａｔｈ Ｍｏｄｅｌ）是一种较为方便地研究生态系统结构,特别是水域生态系统结构的工具,它根据能量平衡原理,用线性齐次方程组描述生态系统中的生物组成和能量在各生物组成之间的流动过程,定量某些生态参数,如生物量、生产量／生物量、消耗量／生物量、营养级和生态营养效率（ＥＥ,Ｅｃｏｔｒｏｐｈｉｃ Ｅｆｆｉｃｉｅｎｃｙ）等,它能够给出能量在生态通道上的流动量,便于对生态２系统的特征和变化