Livestock Trampling Reduces the Conservation Value of Beetle Communities on High Quality Exposed Riverine Sediments

Exposed riverine sediments (ERS) are habitat for a large number of rare and threatened specialist species of invertebrates and are of considerable conservation importance. Livestock trampling is believed to be one of the most widespread causes of damage to ERS habitats in the UK, and as such, its effects were the focus of this investigation. Beetle density was measured at two points within 25 distinct patches of habitat along ∼ ∼47 km of the Afon Tywi special site of scientific interest in South Wales, which is known to support an extremely good quality ERS beetle fauna in a UK context. Partial canonical correspondence analyses were used to explore the relationship between beetle assemblage and a range of environmental variables. The percentage of fine (<8 mm) sediments, median sediment size, distance downstream, cattle stocking levels, and counts of sheep faeces were found to best relate to beetle abundance and assemblage structure. Species richness was positively associated with stocking levels, probably because of the addition of species associated with resultant elevated levels of silt and organic matter. The ERS quality score, which is a measure of conservation value based on the rarity of specialist ERS beetles, was negatively associated with measures of trampling damage. It was therefore concluded that livestock trampling reduces the conservation value of beetle communities on high quality ERS and management should restrict trampling in sites of high conservation importance.     

A retinoic acid-inducible mRNA from human erythroleukemia cells encodes a novel tissue transglutaminase homologue.

A 1.9-kilobase (kb) cDNA for a new transglutaminase protein has been cloned and sequenced from retinoic acid-induced human erythroleukemia (HEL) cells. Full-length cDNA analysis reveals an open reading frame coding for a polypeptide of 548 amino acid residues with a molecular weight of 61,740. The deduced amino acid sequence exhibited 98% identity to the human cellular transglutaminase sequence. The cysteine at position 277 in the active site and the putative Ca(2+)-binding pocket at residues 446-453 of cellular transglutaminase are conserved. Such evidence predicts that the encoded protein product is likely to be a transglutaminase homologue (TGase-H). Immunoprecipitation of the in vitro translation products from a synthetic TGase-H mRNA and from total protein of cultured erythroleukemia HEL cells revealed a protein with a molecular weight of 63,000 by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Northern blot analysis of HEL cells and normal human fibroblast cells WI-38 using a cellular TGase probe detected the 1.9- and 4.0-kb RNA species at a relative abundance of 1:3 and 1:7, respectively. The 3'-end of the human cellular transglutaminase mRNA was also cloned and sequenced to allow comparison to the 3'-end of TGase-H reported here. This new piece gives a full length of 4012 nucleotides (4.0 kb) for human cellular transglutaminase. Comparison of the 5'-end (bases 1-1747) of the 1.9- and 4.0-kb cDNA sequences revealed a very high degree of identity. Beginning with base 1748, the sequences diverge showing no homology. The divergence point correlates with known intron-exon consensus boundaries indicative of alternative splicing.     

Phylogeny and mechanisms of shared hierarchical patterns in birdsong

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Canopy structure measurement by gap fraction analysis using commercial instrumentation

In the past few years, a number of systems for making indirectcanopy structural estimates have become commercially available.These include linear sensors, such as the DEMON, line quantumsensors, and hemispherical sensors, such as the LAI-2000, theLeaf Laser, and the Cl-100. The performance of these instrumentsas reported in the literature is reviewed for forests, row crops,and individual trees. Key words: Leaf area index, LAI-2000, DEMON, SunLink, SunScan, Ceptometer, AccuPAR, Cl-100, gap fraction, sunflecks, hemispherical photography     

Modification of Heterotrimeric G-Proteins in Swiss 3T3 Cells Stimulated with Pasteurella multocida Toxin

Many bacterial toxins covalently modify components of eukaryotic signalling pathways in a highly specific manner, and can be used as powerful tools to decipher the function of their molecular target(s). The Pasteurella multocida toxin (PMT) mediates its cellular effects through the activation of members of three of the four heterotrimeric G-protein families, G_q, G₁₂ and G_i. PMT has been shown by others to lead to the deamidation of recombinant Gα_i at Gln-205 to inhibit its intrinsic GTPase activity. We have investigated modification of native Gα subunits mediated by PMT in Swiss 3T3 cells using 2-D gel electrophoresis and antibody detection. An acidic change in the isoelectric point was observed for the Gα subunit of the G_q and G_i families following PMT treatment of Swiss 3T3 cells, which is consistent with the deamidation of these Gα subunits. Surprisingly, PMT also induced a similar modification of Gα₁₁, a member of the G_q family of G-proteins that is not activated by PMT. Furthermore, an alkaline change in the isoelectric point of Gα₁₃ was observed following PMT treatment of cells, suggesting differential modification of this Gα subunit by PMT. G_s was not affected by PMT treatment. Prolonged treatment with PMT led to a reduction in membrane-associated Gα_i, but not Gα_q. We also show that PMT inhibits the GTPase activity of G_q.     

Tool use by aquatic animals

Tool-use research has focused primarily on land-based animals, with less consideration given to aquatic animals and the environmental challenges and conditions they face. Here, we review aquatic tool use and examine the contributing ecological, physiological, cognitive and social factors. Tool use among aquatic animals is rare but taxonomically diverse, occurring in fish, cephalopods, mammals, crabs, urchins and possibly gastropods. While additional research is required, the scarcity of tool use can likely be attributable to the characteristics of aquatic habitats, which are generally not conducive to tool use. Nonetheless, studying tool use by aquatic animals provides insights into the conditions that promote and inhibit tool-use behaviour across biomes. Like land-based tool users, aquatic animals tend to find tools on the substrate and use tools during foraging. However, unlike on land, tool users in water often use other animals (and their products) and water itself as a tool. Among sea otters and dolphins, the two aquatic tool users studied in greatest detail, some individuals specialize in tool use, which is vertically socially transmitted possibly because of their long dependency periods. In all, the contrasts between aquatic- and land-based tool users enlighten our understanding of the adaptive value of tool-use behaviour.