Inhibition of Candida albicans virulence factors by novel levofloxacin derivatives

Candida albicans is an important opportunistic fungal pathogen, responsible for biofilm associated infections in immunocompromised patients. The aim of the present study was to investigate the antibiofilm properties of novel levofloxacin derivatives on C. albicans biofilms. The levofloxacin derivatives at their Biofilm Inhibitory Concentrations (BIC) were able to inhibit the biofilms of C. albicans, the yeast-to-hyphal transition and were also able to disrupt their mature biofilms. Furthermore, Real-time PCR analysis showed that the expression of ergosterol biosynthesis pathway gene (ERG11) and the efflux pump-encoding genes (CDR1 and MDR1) was decreased upon treatment with the levofloxacin derivatives. The total ergosterol content quantified using UV spectrophotomer showed decrease in ergosterol in the presence of levofloxacin derivatives. Overall, levofloxacin derivatives (6a, 6c and 7d) are capable of inhibiting C. albicans virulence factors. Therefore, these compounds with potential therapeutic implications can be used as new strategy to treat biofilm-related candidal infections.     

Ligand‐based pharmacophore modelling and screening of DNA minor groove binders targeting Staphylococcus aureus

The recognition of DNA by small molecules is of special importance in the design of new drugs. Many natural and synthetic compounds have the ability to interact with the minor groove of DNA. In the present study, identification of minor groove binding compounds was attained by the combined approach of pharmacophore modelling, virtual screening and molecular dynamics approach. Experimentally reported 32 minor groove binding compounds were used to develop the pharmacophore model. Based on the fitness score, best three pharmacophore hypotheses were selected and used as template for screening the compounds from drug bank database. This pharmacophore‐based screening provides many compounds with the same pharmacological properties. All these compounds were subjected to four phases of docking protocols with combined Glide‐quantum‐polarized ligand docking approach. Molecular dynamics results indicated that selected compounds are more active and showed good interaction in the binding site of DNA. Based on the scoring parameters and energy values, the best compounds were selected, and antibacterial activity of these compounds was identified using in vitro antimicrobial techniques. Copyright © 2014 John Wiley & Sons, Ltd.     

Chemical composition and caloric content of egg and zoea of the hermit crabeupagurus bernhardus

Summary 1. Chemical composition and caloric content of egg and zoea of the hermit crabEupagurus bernhardus have been determined and the cumulative efficiencies of yolk utilization calculated.2. The cumulative efficiencies of yolk utilization for different constituents were 70.0%, 55.3%, 79.4% or 35.0% for dry weight, caloric content, protein or fat.3. Since the efficiencies with which the different constituents of yolk utilized vary, the chemical composition of the developing eggs undergoes considerable changes. While fat and caloric content showed remarkable decreases, water, ash and protein contents of the eggs increased.4. Of 0.0722 cal expended on metabolic processes of the embryo, only 28.4% was drawn from the oxidation of protein, while fat contributed as much as 66.6%.5. Considerable quantities of inorganic salts (0.77µg/egg) are absorbed from the sea-water by the developing egg.

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Chemische Zusammensetzung und Kaloriengehalt von Ei und Zoea des EinsiedlerkrebsesEupagurus bernhardus

Kurzfassung Im Laufe der vollständigen Eientwicklung findet eine Zunahme von Wasser um 31,5%, Asche um 5,7%, Eiweiß um 8,8% und Nicht-Eiweiß-Stickstoff um 0,2% statt. In der gleichen Zeit sinkt der Fettgehalt von 29,5% auf 14,8% und der Energiegehalt von 6292 auf 5282 cal/g organischer Substanz. Der Kumulativ-Nutzeffekt der Entwicklung von einem Ei zur Zoea-Larve beträgt 70,0%, 55,3%, 79,4% bzw. 35,0% bezogen auf Trockengewicht, Kaloriengehalt, Eiweiß bzw. Fett. Von den 0,0722 cal, die sich auf den Stoffwechsel der gesamten Entwicklung eines Eies beziehen, werden nur 28,4% aus Eiweiß gewonnen; 66,6% werden durch Oxydation von Fett beigetragen.

     

Maternal and paternal hybrid triploids of tetras

Hybrid maternal triploids were generated by crossing grey-body and red or yellow-tailed Buenos Aires tetra Hemigrammus caudovittatus (BT) males with albino or black Gymnocorymbus ternetzi [widow tetra (WT)] females and retaining the second polar body by heat shock (HS) or cold shock (CS). Paternal triploids were also generated using 2·5% polyethylene glycol (PEG) incubated BT semen to facilitate the entry of two sperm into an egg of WT. Optimum temperature for CS was identified as 6° C and the optimum age for thermal shocking the zygote as 3 min after fertilization. At hatching, survival was 25, 17 and 5% for the HS, CS and paternal triploids, respectively. At maturity, it was further reduced to >2% and the maturity inordinately delayed. With the presence of undifferentiated 'steriles' and almost total absence of females, the expected sex ratio was distorted. Triploid males produced spermatocytes, spermatids but not spermatozoa. Triploidy was confirmed by phenotypic markers, karyotyping, erythrocyte measurement and molecular markers. The fusiform body shape of WT was a dominant phenotypic trait over the typical piscine slender body shape of BT. Polymerase chain reaction products of the genomic DNA of the triploids amplified by OPF6 primer were 300, 450 and 1000 bp length, characteristic of BT, and 500 and 800 bp, typical of WT and thereby confirmed the biparental genomic contribution to the triploids. Analyses of genomic DNA of selected progenies using DMRT-1 marker showed that (1) like the diploid BT males, the hybrid triploid males were also true genetic males, and amplified 237 and 300 bp products but (2) the triploid steriles amplified all the three products of 100, 237 and 300 bp indicating that they were mosaics but the diploid steriles failed to amplify.     

Biological synthesis of gold nanocubes from Bacillus licheniformis

Microorganisms play an important role in the eco-friendly synthesis of metal nanoparticles. This study illustrates the synthesis of gold nanocubes using the bacterium Bacillus licheniformis after 48 h of incubation at room temperature. The morphology of the samples was analyzed using scanning electron microscopy (SEM) and the particles formed were characterized to be nanocubes. The size of gold nanocubes in aqueous solution has been calculated using UV–Vis spectroscopy, XRD and SEM measurements. The nanoparticles are found to be polydisperse nanocubes in the size range 10–100 nm.     

Isolation and sequence analysis of a small cryptic plasmid pRK10 from a corrosion inhibitor degrading strain Serratia marcescens ACE2

The nucleotide sequence of a smallest cryptic plasmid pRK10 of Serratia marcescens ACE2 was determined. When compared to the all other plasmids reported so far from S. marcescens in sizes of over 70 kb, pRK10 is only 4241 bp long with 53% G + C content and has five coding sequences representing a coding percentage of 65.41. This small plasmid consists of one Tdh gene, four mobilization genes, mobCABD, and an origin of replication homologous to those of ColE1-type plasmids. Analysis of the five open reading frames identified on the plasmid suggests the presence of genes involved in replication and mobilization containing sequences homologous to the bom region and mobCABD genes of ColE1 and Tdh from Acinetobacter baumannii str. AYE. Results also indicate that pRK10 does not encode any gene for antibiotic/heavy metal resistance. Copy number and incompatibility of the plasmid with plasmids of ColE1 origin of replication was determined and it is quite stable in its natural host as well as in Escherichia coli DH5α. This relatively small plasmid will be useful for construction of shuttle vectors to facilitate the genetic analysis.     

Evaluation of cetyltrimethylammonium bromide as a potential short-term preservative agent for stripped goat skin

The aim of the present study was to evaluate cetyltrimethylammonium bromide (CTAB) as a short-term preservative agent for stripped goat skin, as an alternative to common salt (sodium chloride), the presently used preservative in the leather industry. Bacteria were isolated from the stripped goat skin at various time intervals and 16S rDNA sequencing results showed the presence of both Gram positive and Gram negative bacteria in stripped goat skin. All the bacterial isolates were inhibited by CTAB with MICs of 0.5–24.5 mg l⁻¹. Application of CTAB against microbial consortium on stripped goat skin showed that skin sample kept in 5% CTAB solution for 10 min did not contain any bacterial growth even after 12 days storage at room temperature. Scanning electron microscopy analysis and physical testing of skin preserved using CTAB did not reveal any bacterial attack on fiber structure of skin. This study shows that CTAB can be applied as a viable alternative to NaCl which generates a huge amount of pollution there by reducing pollution from leather processing.