A synthetic peptide spontaneously self-assembles to reconstruct a group-specific, conformational determinant of hepatitis B surface antigen.

A cysteine-rich peptide of sequence 124 to 147 of the major protein of hepatitis B surface Ag (HBsAg) was synthesized. On cleavage and subsequent work-up it was found that all of the cysteine sulfhydryl groups had spontaneously formed disulfide bonds to yield a heterogenous mixture of multiple forms with molecular masses ranging from 8 to 35 kDa (peptide OS[124-147]). In a direct ELISA peptide OS[124-147] showed a high degree of cross-reactivity with polyclonal anti-HBsAg antiserum whereas the HBsAg-related antigenicity of its disulfide-reduced analogs was insignificant. Peptide OS[124-147] was also recognized by all 15 of the anti-HBsAg-positive human sera tested. Further studies revealed that peptide OS[124-147] represents the conformational, disulfide-dependent "a" determinant of HBsAg and elicits antibodies that cross-react with a variety of HBsAg subtypes. Anti-peptide antibodies bound to the corresponding native epitope with an apparent affinity higher than that of homologous antisera. Finally, polyclonal anti-OS[124-147] antibodies could also immunoprecipitate purified Dane particles in solution. Together these studies indicate that peptide OS[124-147] represents an excellent candidate component of a peptide-based vaccine for hepatitis B.     

DNA methylation regulated microRNAs in HPV-16-induced head and neck squamous cell carcinoma (HNSCC)

Molecular and Cellular Biochemistry - Epigenetic modifications have been reported to play an important role in regulating gene expression and these modifications become critical when they have a...     

Length–weight relationship of three Cynoglossus species (C. puncticeps,C. lingua and C. lida) from Chilika lagoon,India

The present study provides length–weight relationship (LWR) of three fish species, Cynoglossus puncticeps (Richardson, 1846), Cynoglossus lingua Hamilton, 1822 and Cynoglossus lida (Bleeker, 1851) of family Cynoglossidae from Chilika lagoon (19°28′–19°54′N; 85°05′–85°38′E), India. A total of 147 specimens were sampled during March, July and October of 2017 from screen barrier nets (mesh 14 mm to 26 mm) locally called khonda jal operated by local fishermen. The estimated b values derived from the data sets as follows: 3.12 for C. puncticeps, 3.09 for C. lida, and 2.88 for C. lingua.     

Variation of photosynthetic characteristics and yield in wild and cultivated species of yams (<Emphasis Type="Italic">Dioscorea spp.</Emphasis>) from Koraput,India

Variations in leaf gas-exchange characteristics, PSII activity, leaf pigments, and tuber yield were investigated in seven wild and one cultivated species of Dioscorea from Koraput, India, in order to find out their overall adaptability to the environment. The leaf photosynthetic rate, transpiration, stomatal conductance, water-use efficiency, carboxylation efficiency, and photosynthetic pigments were significantly higher in some wild species compared to the cultivated species. In addition, some wild species showed better photochemical efficiency of PSII, photochemical quenching, and electron transport rate in comparison to cultivated one. Furthermore, leaf dry matter accumulation and tuber yield was also higher in some wild species compared to the cultivated species. Taken together, the wild species, such as D. oppositifolia, D. hamiltonii, and D. pubera, showed the superior photosynthetic efficiency compared to the cultivated D. alata and they could be used for future crop improvement programs.     

Functional interactions between the proline-rich and repeat regions of tau enhance microtubule binding and assembly.

Tau is a neuronal microtubule-associated protein that promotes microtubule assembly, stability, and bundling in axons. Two distinct regions of tau are important for the tau-microtubule interaction, a relatively well-characterized "repeat region" in the carboxyl terminus (containing either three or four imperfect 18-amino acid repeats separated by 13- or 14-amino acid long inter-repeats) and a more centrally located, relatively poorly characterized proline-rich region. By using amino-terminal truncation analyses of tau, we have localized the microtubule binding activity of the proline-rich region to Lys215-Asn246 and identified a small sequence within this region, 215KKVAVVR221, that exerts a strong influence on microtubule binding and assembly in both three- and four-repeat tau isoforms. Site-directed mutagenesis experiments indicate that these capabilities are derived largely from Lys215/Lys216 and Arg221. In marked contrast to synthetic peptides corresponding to the repeat region, peptides corresponding to Lys215-Asn246 and Lys215-Thr222 alone possess little or no ability to promote microtubule assembly, and the peptide Lys215-Thr222 does not effectively suppress in vitro microtubule dynamics. However, combining the proline-rich region sequences (Lys215-Asn246) with their adjacent repeat region sequences within a single peptide (Lys215-Lys272) enhances microtubule assembly by 10-fold, suggesting intramolecular interactions between the proline-rich and repeat regions. Structural complexity in this region of tau also is suggested by sequential amino-terminal deletions through the proline-rich and repeat regions, which reveal an unusual pattern of loss and gain of function. Thus, these data lead to a model in which efficient microtubule binding and assembly activities by tau require intramolecular interactions between its repeat and proline-rich regions. This model, invoking structural complexity for the microtubule-bound conformation of tau, is fundamentally different from previous models of tau structure and function, which viewed tau as a simple linear array of independently acting tubulin-binding sites.     

Self-directing optimization of β-1,3-glucanase production by Trichoderma harzianum in batch culture

The self-directing optimization technique was employed to determine the optimal conditions for -1,3-glucanase production by Trichoderma harzianum in batch culture. A maximum -1,3-glucanase production of 0.910 U was obtained at a pH (controlled) of 4.9, an aeration rate of 0.9 1/(1)(min), and an agitator speed of 220 rev/min which were found to be the most suitable.     

Localization of carboxymethyl cellulase in the intergeneric fusants of Trichoderma reesei QM 9414 and Saccharomyces cerevisiae NCIM 3288

In order to convert cellulosic material to ethanol by single step process a chemofusion method has been followed between protoplasts of Trichoderma reesei, QM 9414, and the spheroplasts of Saccharomyces cerevisiae, NCIM 3288, in the author's laboratory. The fusion was a success and it was observed that endoglucanase was the key enzyme in the success of the fusion. In the present study, characterization of the fusants based on the endoglucanase synthesis, its localization and the distribution in the cells are described and compared with that of Trichoderma reesei, QM 9414, (wild type).     

Transformation of intact cells of Saccharomyces cerevisiae by square wave pulses using castellated microelectrodes

Genetic transformation of intact cells of Saccharomyces cerevisiae with an expression vector pYES 2, to efficiencies of 10⁵ to 10⁶ by high voltage electroporation is presented. Prototrophic transformants of yeast expressing resistance to ampicillin were obtained by subjecting the mixture of cells and DNA to a single square wave pulse at an amplitude of 2.5, 2.75 and 3.0 kV/cm in combination with a pulse width of 4, 5 and 3 msec for the three different strains Y915, Y742 and INVSC 1 respectively. The critical factors and electrical parameters which determine the transformation efficiency were examined. This communication describes the optimal conditions for reproducible and high efficiency transformation of yeast by the method of electroporation.     

Enhanced Immune Responses to HIV-1 Envelope Elicited by a Vaccine Regimen Consisting of Priming with Newcastle Disease Virus Expressing HIV gp160 and Boosting with gp120 and SOSIP gp140 Proteins

Newcastle disease virus (NDV) expressing HIV-1 BaL gp160 was evaluated either alone or with monomeric BaL gp120 and BaL SOSIP gp140 protein in a prime-boost combination in guinea pigs to enhance envelope (Env)-specific humoral and mucosal immune responses. We showed that a regimen consisting of an NDV prime followed by a protein boost elicited stronger serum and mucosal Th-1-biased IgG responses and neutralizing antibody responses than NDV-only immunizations. Additionally, these responses were higher after the gp120 than after the SOSIP gp140 protein boost.