青海省大果圆柏群落物种多样性与土壤因子的关系

大果圆柏(Juniperus tibetica)群落是三江源地区主要森林群落之一,在保障中国水生态安全、保育生物多样性和延缓气候变化等方面发挥着重要作用。该研究以青海省果洛州班玛县大果圆柏天然群落为对象,通过野外调查和室内分析,以明确群落的物种组成,以及物种多样性与土壤因子的关系,为大果圆柏群落物种多样性保护和资源植物开发利用提供参考。结果表明：(1)大果圆柏群落内共有植物169种,隶属36科101属,其中菊科(Compositae)、蔷薇科(Rosaceae)和毛茛科(Ranunculaceae)植物物种最多,分别占总物种的14.20%、13.61%和9.47%。(2)大果圆柏群落的灌、草层物种多样性特征差异显著,草本层的丰富度(2.90)、多样性(2.35)和优势度指数(0.80)均高于灌木层丰富度(1.03)、多样性(1.45)和优势度指数(0.70),而均匀度指数(0.79)低于灌木层(0.89)。(3)0~60 cm土层林地土壤有机质、全氮、全磷含量及pH均值分别为(87.54±20.32) g·kg^-1、(4.68±1.36) g·kg^-1、(0.83±0.18) g·kg^-1和6.73±0.51。(4)灌木层Margalef指数、Shannon Wiener指数与土壤有机质含量呈极显著正相关关系(P<0.01);草本层Margalef指数、Shannon Wiener指数与土壤全钾含量呈显著负相关关系(P<0.05),与土壤pH呈显著正相关关系(P<0.05)。研究认为,青海省大果圆柏林地土壤有机质、全钾含量和pH是影响群落物种多样性的主导因子。     

Upgrading of high-boiling fraction of bio-oil in supercritical methanol

In this work, the upgrading reactions of high-boiling fraction (HBF) of bio-oil were carried out over a series of supported mono- and bi-metallic catalysts under the supercritical methanol condition. During these reactions, esterification and cracking (alcoholysis and hydrocracking) were the two dominant processes. PtNi/MgO exhibited good performance, and gave a high yield (72.4 wt.%) of refined oil. The acid-base properties of the supports have an important effect on the coke deposition on the catalyst surface. The acidic catalysts gave the somewhat lower product yields, but tended to inhibit coking reaction. This would improve the life of the catalysts in the practical applications. The refined oil is believed to be a potential substitute or partial substitute for the fossil transportation fuel.     

Differences in genotypes of Helicobacter pylori from different human populations

DNA motifs at several informative loci in more than 500 strains of Helicobacter pylori from five continents were studied by PCR and sequencing to gain insights into the evolution of this gastric pathogen. Five types of deletion, insertion, and substitution motifs were found at the right end of the H. pylori cag pathogenicity island. Of the three most common motifs, type I predominated in Spaniards, native Peruvians, and Guatemalan Ladinos (mixed Amerindian-European ancestry) and also in native Africans and U.S. residents; type II predominated among Japanese and Chinese; and type III predominated in Indians from Calcutta. Sequences in the cagA gene and in vacAm1 type alleles of the vacuolating cytotoxin gene (vacA) of strains from native Peruvians were also more like those from Spaniards than those from Asians. These indications of relatedness of Latin American and Spanish strains, despite the closer genetic relatedness of Amerindian and Asian people themselves, lead us to suggest that H. pylori may have been brought to the New World by European conquerors and colonists about 500 years ago. This thinking, in turn, suggests that H. pylori infection might have become widespread in people quite recently in human evolution.     

Multi-environment mapping and meta-analysis of 100-seed weight in soybean

100-Seed weight (100-SW) of soybean is an important but complicated quantitative trait to yield. This study was focus on the quantitative trait loci (QTLs) of soybean 100-SW from 2006 to 2010, using recombination inbred lines population that was derived from a cross between Charleston and Dongnong 594. A total of 23 QTLs for 100-SW were detected in the linkage group C2, D1a, F, G and O. Nine QTLs were identified by composite interval mapping including one QTL with the minimum confidence interval (CI) of 1.3?cM, while 14 QTLs by multiple interval mapping. Furthermore, 94 reported QTLs of 100-SW were integrated with our QTL mapping results using BioMercator. As a result, 15 consensus QTLs and their corresponding markers were identified. The minimum CI was reduced to 1.52?cM by the combination of meta-analysis. These findings may merit fine-mapping of these QTL in soybean.     

球毛壳菌(Chaetomium globosum)NK102 纤维素酶基因及其表达条件

[目的]生物质的利用是当前生物技术研究的一个热点.本小组分离到一株高效降解纤维素球毛壳菌(Chaetomium globosum)NK102,本文拟探索研究此菌的纤维素酶表达系统并寻找影响酶基因表达的关键因素.[方法]通过对NK102测序,本文界定了球毛壳菌NK102的主要纤维素酶编码基因,使用数字基因表达谱升级版(RNA-Seq)的方法得到纤维素酶基因的表达差异,然后观察了营养、物理条件下纤维素酶基因表达和酶活性变化的情况.[结果]发现随着培养时间的延长,纤维素酶基因整体上表达量升高.在所选基因中,外切葡聚糖酶、纤维二糖脱氢酶和内切葡聚糖酶基因(cbh1,cdh和egl1)的表达量最高.糖代谢的负调控因子ACE I和CreA的随时间表达量均降低,而Hap2/3/5复合体的表达量反而升高.之后检测了不同碳源培养基对纤维素酶基因表达量和酶活性的影响,发现葡萄糖为强阻遏因子,纤维二糖为其诱导物,而山梨醇没有影响.特别是,我们发现光照也影响纤维素酶基因的表达,黑暗条件明显抑制酶基因的表达.[结论]转录组学的方法可以初步探索纤维素酶表达的规律,酶基因的表达受到营养、物理条件的影响.本研究为揭示球毛壳菌降解纤维素分子机理和阐释生物质糖代谢途径提供了有用参考.     

Human liver alkaline phosphatase, purification and partial sequencing: homology with the placental isozyme

Human liver alkaline phosphatase (AP) has been purified to homogeneity. The enzyme has a molecular weight of 150,000 in its native state and consists of two identical subunits of Mr 75,000. After treatment with endoglycosidase F the molecular weight is reduced to 50,000 indicating a high degree of glycosylation. The amino-terminal sequence up to 22 residues was found to be Leu-Val-Pro-Glu-Lys-Glu-Lys-Asp-Pro-Lys-Tyr-(Ala)-Arg-Asp-Gln-Ala-Gln-?- Thr-Leu-Lys-Tyr. The amino-terminal portions of human and bovine liver AP are identical. The amino termini of the human liver and human placental AP isozymes have appreciable homology. Conformationally the amino termini are very similar.     

自身抗体检测蛋白芯片制备条件的优化及初步应用

选择临床上常用的用于自身免疫性疾病抗体检测所对应的12种抗原, 运用NBT/BCIP显色反应策略, 研制一种可同时检测12种常用自身抗体的蛋白芯片检测系统。应用NBT/BCIP终点检测体系对每一种抗原的点样液、点样浓度、血清稀释度进行优化, 制备出可同时检测12种自身抗体的蛋白芯片, 并通过对678例病人血清和120例非病人血清的检测进行敏感度和特异度评价。优化的点样液为0.1%TBST, 血清稀释度为1:4, 12种抗原的最佳点样浓度分别为: ANA 520 mg/mL, Ro-60/SSa 465 mg/mL, La/SSb 530 mg/mL, Jo-1 530 mg/mL, Scl-70 525 mg/mL, Sm 520 mg/mL, Ro-52/SSa 615 mg/mL, RF 340 mg/mL, CCP 465 mg/mL, u1RNP 410 mg/mL, CENP-B 490 mg/mL, dsDNA 580 mg/mL; 通过对678份阳性血清和120份阴性血清的检测, 该蛋白芯片技术对12种自身抗体检测的敏感度在80%~96.3%之间, 特异度在86.7%~100%之间, 与传统的检测技术有较高的符合率。我们研究的自身抗体检测蛋白芯片技术体系具有快速、方便、高通量、廉价等优势, 易于商业化, 适合不同条件的临床需要。     

胃肠道间质瘤组织中MMP-13与CD147的表达及其意义

目的探讨基质金属蛋白酶-13（Matrix metalloproteinases-13,MMP-13）和CD147的表达与胃肠道间质瘤（Gastrointestinals stromal tumors,GISTs）临床病理特征的关系。方法采用免疫组织化学检测69例GISTs组织中MMP-13及CD147的表达,分析MMP-13和CD147与各病理参数的关系。结果GISTs组织中MMP-13和CD147的表达率分别为95.7%和97.1%,MMP-13阳性表达程度与GISTs的生物学行为、CD147表达及肿瘤的大小呈正相关（P〈0.05）;CD147阳性表达程度与肿瘤的大小呈正相关（P〈0.05）。结论MMP-13表达与GISTs生物学行为关系密切,可作为GISTs生物学行为的潜在评价指标。     

核糖核酸酶抑制因子对H_2O_2损伤的大鼠神经胶质瘤细胞系C6的影响

核糖核酸酶抑制因子 (ribonucleaseinhibitor,RI)是广泛存在于哺乳动物细胞浆中的一种酸性糖蛋白 .为了进一步了解RI的功能 ,根据RI分子结构富含巯基的特点 ,研究了RI对过氧化氢(H2 O2 )损伤的大鼠神经胶质瘤细胞 (C6 )的影响 .用不同浓度的H2 O2 分别作用于转染有RIcDNA并且RI过表达的C6细胞和正常C6细胞 ,对比损伤前后 2者的细胞存活率、LDH漏出量、细胞内GSH和MDA含量差别 ,以及细胞内抗氧化酶类GPX、CAT和GST活性的差别 .结果表明 ,与正常C6细胞相比 ,RI过表达的C6细胞在H2 O2 作用下存活率高 ,LDH漏出量、MDA含量明显减少 ,而细胞内GSH较多 ;RI过表达的C6细胞在损伤前后均表现出更强的CAT和GST活性 .提示RI具有抗氧化功能 ,能够减轻H2 O2 所致的细胞过氧化损伤 .     

Gramene: a resource for comparative grass genomics

Gramene (http://www.gramene.org) is a comparative genome mapping database for grasses and a community resource for rice. Rice, in addition to being an economically important crop, is also a model monocot for understanding other agronomically important grass genomes. Gramene replaces the existing AceDB database ‘RiceGenes’ with a relational database based on Oracle. Gramene provides curated and integrative information about maps, sequence, genes, genetic markers, mutants, QTLs, controlled vocabularies and publications. Its aims are to use the rice genetic, physical and sequence maps as fundamental organizing units, to provide a common denominator for moving from one crop grass to another and is to serve as a portal for interconnecting with other web-based crop grass resources. This paper describes the initial steps we have taken towards realizing these goals.