Pulp–seed attachment is a dominant variable explaining legitimate seed dispersal: a case study on woolly monkeys

Seed dispersal is a mutualistic interaction in which frugivores gain nutrients and plants gain when seeds are transported to adequate places for establishment. However, this relationship is prone to deceit, for example, when frugivores spit-out seeds in the proximity of parental trees. Still, few hypotheses have offered explanations on why deceiving strategies are not widespread. In this study, I explore the importance of how difficult it is to mechanically separate the nutritious pulp from the seeds, as a factor that can explain the chance a seed has of being dispersed by woolly monkeys (Lagothrix lagothricha). I completed 1,440 h of focal animal follows during 2 years in order to quantify the chances plant species have of being dispersed. To do so, I evaluated the residuals from the relationship between the number of seeds manipulated and seeds dispersed by a population of woolly monkeys in Tinigua Park (Colombia). For 74 fruit species, I estimated how difficult it is to separate pulp from seeds as the time needed to separate the parts. An exponential model showed that this variable was able to predict 38% of the variation on dispersal probability, demonstrating that, when it is difficult to separate the pulp from the seeds, the probability of legitimate dispersal increases. However, when fruit parts were easy to separate, there was more variation in the outcome. My results suggest that many plants have evolved mechanisms (e.g., small seeds embedded in pulp, strong attachment, irregular seed surface, and thin pulp layer) that preclude deceit by frugivores.     

Taxonomic and Functional Metagenomic Profiling of the Microbial Community in the Anoxic Sediment of a Sub-saline Shallow Lake (Laguna de Carrizo, Central Spain)

The phylogenetic and functional structure of the microbial community residing in a Ca(2+)-rich anoxic sediment of a sub-saline shallow lake (Laguna de Carrizo, initially operated as a gypsum (CaSO(4)?×?2 H(2)O) mine) was estimated by analyzing the diversity of 16S rRNA amplicons and a 3.1?Mb of consensus metagenome sequence. The lake has about half the salinity of seawater and possesses an unusual relative concentration of ions, with Ca(2+) and SO (4) (2-) being dominant. The 16S rRNA sequences revealed a diverse community with about 22% of the bacterial rRNAs being less than 94.5% similar to any rRNA currently deposited in GenBank. In addition to this, about 79% of the archaeal rRNA genes were mostly related to uncultured Euryarchaeota of the CCA47 group, which are often associated with marine and oxygen-depleted sites. Sequence analysis of assembled genes revealed that 23% of the open reading frames of the metagenome library had no hits in the database. Among annotated genes, functions related to (thio) sulfate and (thio) sulfonate-reduction and iron-oxidation, sulfur-oxidation, denitrification, synthrophism, and phototrophic sulfur metabolism were found as predominant. Phylogenetic and biochemical analyses indicate that the inherent physical-chemical characteristics of this habitat coupled with adaptation to anthropogenic activities have resulted in a highly efficient community for the assimilation of polysulfides, sulfoxides, and organosulfonates together with nitro-, nitrile-, and cyanide-substituted compounds. We discuss that the relevant microbial composition and metabolic capacities at Laguna de Carrizo, likely developed as an adaptation to thrive in the presence of moderate salinity conditions and potential toxic bio-molecules, in contrast with the properties of previously known anoxic sediments of shallow lakes.     

Centennial olive trees as a reservoir of genetic diversity

Background and Aims

Genetic characterization and phylogenetic analysis of the oldest trees could be a powerful tool both for germplasm collection and for understanding the earliest origins of clonally propagated fruit crops. The olive tree (Olea europaea L.) is a suitable model to study the origin of cultivars due to its long lifespan, resulting in the existence of both centennial and millennial trees across the Mediterranean Basin.

Methods

The genetic identity and diversity as well as the phylogenetic relationships among the oldest wild and cultivated olives of southern Spain were evaluated by analysing simple sequence repeat markers. Samples from both the canopy and the roots of each tree were analysed to distinguish which trees were self-rooted and which were grafted. The ancient olives were also put into chronological order to infer the antiquity of traditional olive cultivars.

Key Results

Only 9·6 % out of 104 a priori cultivated ancient genotypes matched current olive cultivars. The percentage of unidentified genotypes was higher among the oldest olives, which could be because they belong to ancient unknown cultivars or because of possible intra-cultivar variability. Comparing the observed patterns of genetic variation made it possible to distinguish which trees were grafted onto putative wild olives.

Conclusions

This study of ancient olives has been fruitful both for germplasm collection and for enlarging our knowledge about olive domestication. The findings suggest that grafting pre-existing wild olives with olive cultivars was linked to the beginnings of olive growing. Additionally, the low number of genotypes identified in current cultivars points out that the ancient olives from southern Spain constitute a priceless reservoir of genetic diversity.     

Dynamic nonlinearity of lung tissue: frequency dependence and harmonic distortion

Harmonic distortion (HD) is a simple approach to analyze lung tissue nonlinear phenomena. This study aimed to characterize frequency-dependent behavior of HD at several amplitudes in lung tissue strips from healthy rats and its influence on the parameters of linear analysis. Lung strips (n = 17) were subjected to sinusoidal deformation at three different strain amplitudes (Δε) and fixed operational stress (12 hPa) among various frequencies, between 0.03 and 3 Hz. Input HD was <2% in all cases. The main findings in our study can be summarized as follows: 1) harmonic distortion of stress (HD) showed a positive frequency and amplitude dependence following a power law with frequency; 2) HD correlated significantly with the frequency response of dynamic elastance, seeming to converge to a limited range at an extrapolated point where HD=0; 3) the relationship between tissue damping (G) and HD(ω=1) (the harmonic distortion at ω=1 rad/s) was linear and accounted for a large part of the interindividual variability of G; 4) hysteresivity depended linearly on κ (the power law exponent of HD with ω); and 5) the error of the constant phase model could be corrected by taking into account the frequency dependence of harmonic distortion. We concluded that tissue elasticity and tissue damping are coupled at the level of the stress-bearing element and to the mechanisms underlying dynamic nonlinearity of lung tissue.     

Finite size scaling in the local abundances of geographic populations

We analyzed the statistical distribution of intra-specific local abundances for a set North American breeding bird species. We constructed frequency plots for every species and found that they showed long-tail power-law behavior, truncated at an upper abundance cut-off value. Based on finite size scaling arguments, we investigated whether frequency curves may be considered scaled copies of each other. Data collapse was possible after taking powers of the total abundance of each species, in order to correct deviations from the underlying universal finite size scaling function (UFSS). The UFSS power law exponent oscillated in time within the regime of unbounded variance, which is consistent with the wild fluctuations that characterize ecological phenomena. We speculate that our results may eventually be linked to other law-like macroecological phenomena, such as energetic constraints reported in allometric scaling.