Very-broad-scale assessment of human impacts on river condition

1. Management of whole rivers and river catchments requires a comprehensive set of information about river condition and use, both existing and historical, and the links between them at regional, state or national scales. This paper outlines a new approach to the assessment of river condition, using a small team was able to assess 210 000 km of rivers across more than 3 million km² of Australia in little more than a year. 2. The approach was driven by a hierarchical model of river function, which assumed that broad‐scale catchment characteristics affect local hydrology, habitat features, water quality and, ultimately, aquatic biota. The model provided the basis for selecting important ecologically relevant features that indices should represent. For each reach of each river we derived a biological index and an environmental index based on measures quantifying catchment and hydrological condition, and habitat and water quality condition. Data came from existing state and national databases, satellite images, site measurements and process models. 3. All indices were calculated as deviation from a reference condition, were range‐standardised and were divided into equivalent bands of condition. Amalgamation of index components and of sub‐indices was determined by consideration of their ecological effects; for example, general degradation might be additive, but toxic effects of one component would override all others. 4. Several internal and external validation methods were employed, with the all‐important validation of the final assessments undertaken by comparison with a similar index based on locally measured data. 5. The environmental assessment classified 14% of reaches as largely unmodified, 67% as moderately modified and 19% as substantially modified by human impacts. The biological assessment based on site assessments and modelled data using invertebrates indicated that 70% of reaches were equivalent to reference condition and that 30% were significantly impaired. Catchment disturbance, elevated sediment and nutrient loads, and habitat degradation all contributed to these results. These impacts have all occurred during the last 200 years (post‐European settlement). 6. Partly as a result of the assessments of this study the Australian Government has begun to adopt a more environmentally sustainable approach to broad‐scale water management.     

The Physiological Mechanisms of Acclimatization in Tropical Reef Corals

SYNOPSIS. The ability of scleractinian corals to survive changesthat are predicted in the global environment over the next centurywill lie in their physiological mechanisms of acclimatization.Corals display rapid modifications in behavior, morphology andphysiology enabling them to photoacclimate to changing lightconditions, a scenario that demonstrates considerable biologicalflexibility. Here we argue that the acclimatization mechanismsin corals are fundamentally similar to those exhibited by otherinvertebrate taxa. We discuss protein metabolism as a mechanismunderlying acclimatization responses in reef corals, and explorethe relationship between protein turnover, metabolic rate, growthrate, and acclimatization capacity. Our preliminary analysessuggest that corals with low growth rates (µCa/mgN/h)and high metabolic rates (µO₂/cm²/hr), such as the massivespecies, acclimatize more effectively than those with high growthrates and low metabolic rates, a feature that is characteristicof branching species. We conclude that studies of protein turnover,combined with temporally relevant investigations into the dynamicaspects of coral dinoflagellate symbioses will provide considerableinsight into why corals exhibit such a high level of variationin response to the same environmental challenge. Furthermore,a more detailed understanding of acclimatization mechanismsis essential if we are to predict how a coral assemblage willrespond to present and future environmental challenges.     

Stockwellia quadrifida (Myrtaceae), a new Australian genus and species in the eucalypt group

A new genus and species in the eucalypt group of the Myrtaceae is described. Stockwellia quadrifida D.J. Carr, S.G.M. Carr & B.Hyland gen. et sp. nov. is a rainforest tree of restricted distribution on the Atherton Tableland, North Queensland, Australia. Molecular data suggest that it is the sister taxon to Eucalyptopsis and this is supported by morphological characters. The prolonged hypanthium and reduced perianth appear to be synapomorphies for these two genera and the circumscissile hypanthium a synapomorphy shared with Allosyncarpia . Stockwellia differs from Eucalyptopsis by the distinct, albeit reduced, perianth and the hypanthium splitting into four segments at anthesis. The relationship of these two genera indicates an historical biogeographical link between New Guinea and the Queensland wet tropics region.  © 2002 The Linnean Society of London, Botanical Journal of the Linnean Society , 2002, 139 , 415–421.     

Burkholderia species are ancient symbionts of legumes

Burkholderia has only recently been recognized as a potential nitrogen-fixing symbiont of legumes, but we find that the origins of symbiosis in Burkholderia are much deeper than previously suspected. We sampled 143 symbionts from 47 native species of Mimosa across 1800 km in central Brazil and found that 98% were Burkholderia . Gene sequences defined seven distinct and divergent species complexes within the genus Burkholderia . The symbiosis-related genes formed deep Burkholderia -specific clades, each specific to a species complex, implying that these genes diverged over a long period within Burkholderia without substantial horizontal gene transfer between species complexes.     

Importance of fire in influencing the occurrence of snakes in an upland region of arid Australia

In arid Australia, changes to historic fire regimes may now produce more large‐scale wildfire events. The impacts of these fires on fauna communities are poorly known. We sought to test the impacts of fire on the occurrence of two arid‐zone snake species, the desert death adder (Acanthophis pyrrhus) and monk snake (Parasuta monachus), specialist inhabitants of hummock grassland and mulga shrubland, respectively. We also examined the influence of fire on the occurrence of a habitat generalist, the sympatric Stimson's python (Antaresia stimsoni). Under an Information‐Theoretic framework we modelled the occurrence of each species with a range of habitat variables, including fire history, using logistic regression. As predicted, the two habitat specialists were more likely to be encountered at locations that had a lower percentage of surrounding area burnt in the most recent wildfires (2002), while fire variables failed to predict the occurrence of the habitat generalist. Acanthophis pyrrhus, already predisposed to endangerment through a suite of life‐history characteristics, may be at increased risk through accidental and deliberate burning and fragmentation of old‐growth hummock grasslands. We stress the importance of prescribed burning and natural fire breaks in maintaining areas of old‐growth hummock grassland across the landscape.     

Determinants of preferred intertidal feeding habitat for Eastern Curlew: A study at two spatial scales

Abstract Broadscale habitat use by Eastern Curlews (Numenius madagascariensis) in their non‐breeding range in eastern Australia was assessed using low tide surveys on feeding grounds, where 60 skilled volunteers made repeated counts of the birds on intertidal flats, across 41% (9500 ha) of the intertidal habitat within Moreton Bay, Australia. We analysed 32 defined sections of intertidal flat, of roughly equal area (mostly 200–400 ha), which varied greatly in their curlew density (2–47 birds per 100 ha) and also in substrate and other environmental features. Sites with the least resistant substrates had densities three times those with the most resistant substrates. Of 10 environmental characteristics measured for each site, substrate resistance was the best predictor of curlew density (r² = 0.45). Characteristics that were poor predictors included distance to the nearest roost, level of human disturbance and distance to urban settlement. For a finer‐scale assessment, microhabitat use and feeding behaviour were recorded during low tide within 12 intertidal flats, which varied in size (23–97 ha), substrate, topography and other features. Across all flats, curlews strongly preferred to feed relatively close (0–50 m) to the low‐water line. They fed on a variety of substrates (including sand, sandy‐mud, mud and seagrass) in broadly similar proportions to their occurrence in the habitat. There was a statistically significant preference for sand, although its magnitude was not strong. These results indicate that curlews select habitat most strongly at a between‐flat rather than within‐flat scale.     

The Structure and Development of the Reproductive Organs and Carposporophyte in two British Species of Gelidium

The structure and development of the reproductive organs andcarposporophyte are described for two British species of Gelidium,G. latifolium (Grev.) Born. & Thur. and G. pulchellum (Turn.)Kütz. The gonimoblast does not develop directly from theunchanged carpogonium, as was thought by Kylin, but a swollenmultinucleate cell of irregular outline is formed first, eitherfrom the carpogonium alone, or by the fusion of the carpogoniumand certain neighbouring cells; the gonimoblast develops fromlong, non-septate processes of this multi-nucleate cell. Thesignificance of the fusion of the carpogonium and certain vegetativecells is discussed in relation to the various definitions ofthe auxiliary cell which have been proposed. It is concludedthat an auxiliary cell does not occur in Gelidium.     

Polyamine Synthesis and Interconversion by the Microsporidian Encephalitozoon cuniculi

Polyamines are small cationic molecules necessary for growth and differentiation in all cells. Although mammalian cells have been studied extensively, particularly as targets of polyamine antagonists, i.e. antitumor agents, polyamine metabolism has also been studied as a potential drug target in microorganisms. Since little is known concerning polyamine metabolism in the microsporidia, we investigated it in Encephalitozoon cuniculi, a microspordian associated with disseminated infections in humans. Organisms were grown in RK-13 cells and harvested using Percoll gradients. Electron microscopy indicated that the fractions banding at 1.051-1.059/g/ml in a microgradient procedure, and 1.102-1.119/g/ml in a scaled-up procedure were nearly homogenous, consisting of pre-emergent (immature) spores which showed large arrays of ribosomes near polar filament coils. Intact purified pre-emergent spores incubated with [1H] ornithine and methionine synthesized putrescine, spermidine, and spermine, while [14C]spermine was converted to spermidine and putrescine. Polyamine production from ornithine was inhibitable by DL-alpha-difluoromethylornithine (DFMO) but not by DL-alpha-difluoromethylarginine (DFMA). Cell-free extracts from mature spores released into the growth media had ornithine decarboxylase (ODC), S-adenosylmethionine decarboxylase (AdoMetdc), and spermidine/spermine N1-acetyltransferase (SSAT) activities. ODC activity was inhibited by DFMO, but not by DFMA. AdoMetdc was putrescine-stimulated and inhibited by methylglyoxal-bis(guanylhydrazone); arginine decarboxylase activity could not be detected. It is apparent from these studies that Encephalitozoon cuniculi pre-emergent spores have a eukaryotic-type polyamine biosynthetic pathway and can interconvert exogenous polyamines. Pre-emergent spores were metabolically active with respect to polyamine synthesis and interconversion, while intact mature spores harvested from culture supernatants had little metabolic activity.