Outline of phylogeny and character evolution in Rhizocarpon (Rhizocarpaceae, lichenized Ascomycota) based on nuclear ITS and mitochondrial SSU ribosomal DNA sequences

The phylogeny of the lichen genus Rhizocarpon (Rhizocarpaceae, lichenized Ascomycota) was investigated using nucleotide sequences from the ITS region of the nuclear ribosomal DNA and the SSU region of the mitochondrial ribosomal DNA from 13 species of Rhizocarpon , Catolechia wahlenbergii and Poeltinula cerebrina . Phylogenetic estimations were performed using maximum parsimony and Bayesian MCMC tree sampling. Twelve phylogenetic null hypotheses were tested using MCMC tree sampling. The evolution of five morphological characters was assessed by mapping them onto MCMC tree samples. The results indicate that Rhizocarpon in its current sense is polyphyletic and can only be made monophyletic if R. hochstetteri is excluded or Poeltinula , and possibly also Catolechia , are included. The root placement in the Rhizocarpaceae is ambiguous, either Catolechia or Poeltinula + R. hochstetteri being the sistergroup to the rest of the family. Previously suggested infrageneric arrangements based on presence or absence of the yellow substance rhizocarpic acid in the thallus or the septation of the ascospores are unnatural. Some species with grey or brown thallus may have evolved from a yellow ancestor. Spore septation and colour, amyloidity of the thalline medulla, and the presence of stictic acid complex and rhizocarpic acid are shown to have changed multiple times during the course of evolution.  © 2002 The Linnean Society of London, Biological Journal of the Linnean Society , 2002, 77 , 535–546.     

Phylogeny and cladistic classification of terrestrial nemerteans: the genera Pantinonemertes Moore & Gibson and Geonemertes Semper

Evolutionary relationships among seven species from two genera ( Pantinonemertes and Geonemertes ) of terrestrial nemerteans (phylum Nemertea) were estimated by a Wagner analysis of 27 morphological, ecological and life history characters. Pantinonemertes was found to be a paraphyletic taxon, and it is suggested that this genus should be combined with Geonemertes to form a monophyletic group. A previous hypothesis for how terrestrial nemerteans evolved is discussed and compared to the results of the cladistic analysis. This suggests that terrestrial and semi-terrestrial species evolved from a marine ancestor; the upper littoral and marine environments have been recolonized by descendants from a terrestrial ancestor.     

Phylogenetic relationships and genetic distances between some monostiliferous interstitial nemerteans (Ototyphlonemertes, Hoplonemertea, Nemertea) indicated from the 16s rRNA gene

Part of the 16s rRNA mitochondrial gene is used to reconstruct the relationships within five populations (representing three currently recognized species) of interstitial nemerteans ( Ototyphlonemertes , Hoplonemertea, Nemertea), and to assess genetic divergence between representatives of these populations. The non-helicophoran individuals form a monophyletic sister-group to the helicophoran taxon, which further resolves a previous hypothesis based on morphological characters. The small nucleotide differences between some of the populations are within levels expected for panmictic populations and fail to distinguish them genetically; without applying a phylogenic perspective, some of the populations may be allocated into paraphyletic species assemblages.     

Cyanobiont specificity in some Nostoc-containing lichens and in a Peltigera aphthosa photosymbiodeme

The cyanobacterial symbionts in some Nostoc -containing lichens were investigated using the nucleotide sequence of the highly variable cyanobacterial tRNA^Leu (UAA) intron. When comparing different Nostoc -containing lichens, identical intron sequences were found in different samples of the same lichen species collected from two remote areas. This was true for all species where this comparison was made ( Peltigera aphthosa (L.) Willd., P. canina (L.) Willd. and Nephroma arcticum (L.) Torss.). With one exception, a specific intron sequence was never found in more than one lichen species. However, for two of the species, Peltigera aphthosa and Nephroma arcticum , two different cyanobionts were found in different samples. By examining a P. aphthosa photosymbiodeme it could be shown that the same Nostoc is present in both bipartite and tripartite lobes of this lichen. It is thus possible for one cyanobiont/ Nostoc to form the physiologically different symbioses that are found in bipartite and tripartite lichens. The connection between photobiont identity and secondary chemistry is discussed, as a correlation between differences in secondary chemistry and different cyanobionts/ Nostoc s in the species Peltigera neopolydactyla (Gyeln.) Gyeln. was observed. It is concluded that more knowledge concerning the photobiont will give us valuable information on many aspects of lichen biology.     

Phagotrophic Mechanisms and Prey Selection in Free-living Dinoflagellates1

Three types of feeding mechanisms are known in dinoflagellates: pallium feeding, tube feeding, and direct engulfment. Pallium feeding has only been described for heterotrophic thecate species (Protoperidinium, Diplopsalis group). Tube feeding is commonly found among both naked and thecate species of mixotrophic and heterotrophic dinoflagellates (e.g. Amphidinium, Dinophysis, Gyrodinium, Peridiniopsis). Direct engulfment is mainly found among naked species (e.g. Gymnodinium, Gyrodinium, Noctiluca): recently, however, some thecate species have been shown to use this feeding mechanism as well. Feeding behavior in dinoflagellates involves several steps prior to actual ingestion, including precapture, capture, and prey manipulation. As feeding mechanisms allow the ingestion of relatively large prey or parts thereof, dinoflagellates are regarded as raptorial feeders. While prey size plays an important role in the ability of dinoflagellates to ingest food, this alone cannot explain observed prey preferences. Some dinoflagellate species can be very selective in their choice of prey, while others show a remarkable versatility.     

Cryptic speciation at organic‐rich marine habitats: a new bacteriovore annelid from whale‐fall and fish farms in the North‐East Atlantic

Vigtorniella ardabilia sp. nov. , a new chrysopetalid annelid, is described from a whale‐fall in Sweden and from sediment samples collected beneath fish farms in Norway. The new Vigtorniella species is morphologically almost identical to Vigtorniella flokati from whale‐falls in the Pacific Ocean, although molecular evidence from four genes shows that they are different species. Population genetic structure and phylogenetic relationships of V. ardabilia sp. nov. were assessed using molecular data from the nuclear genes 18S and 28S, and the mitochondrial 16S and cytochrome c oxidase subunit I (COI). High levels of gene flow are reported between contrasting organic‐rich environments in the North Atlantic (fish farms and whale‐fall). Observations of feeding biology and habitat suggest that V. ardabilia specializes on bacterial mats, rather than on whale‐falls, although the two species of Vigtorniella for which data were available show very different feeding behaviours. Our results further showed an unexpectedly low divergence rate in Vigtorniella for the mitochondrial markers, suggesting stabilizing selection. Analyses carried out with parsimony, maximum likelihood, and MrBayes all placed the genus Vigtorniella as sister group to Dysponetus, suggesting a close evolutionary link to sediment‐dwelling fauna. © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2009, 155 , 774–785.     

Osteology and ecology of Megantereon cultridens SE311 (Mammalia; Felidae; Machairodontinae), a sabrecat from the Late Pliocene – Early Pleistocene of Senéze, France

Megantereon cultridens was a derived, Late Pliocene to Early Pleistocene sabrecat, and although fossils of animals referred to the genus and species have been found at several locations throughout Eurasia, most are fragmentary. However, the specimen SE311 from Senéze in France represents an almost complete and well-preserved skeleton, and this is only known from very few other sabrecats, thus providing a rare glimpse into the full anatomy of an unusual and derived sabrecat. In this monograph, we provide a complete overview of the anatomy of Megantereon cultridens SE311, and compare it with extant large felids, and the few other derived sabrecats from which ample fossil material is known, although most frequently representing several specimens. SE311 was a large specimen of M. cultridens and would have had a body mass of 100–110 kg and a head–body length or around 160 cm, which is similar to a small lioness or large male jaguar. Megantereon sp. were sexually dimorphic, and the size of SE311 suggests that it was a male. As with several other derived sabrecats, it was powerfully built, and had particularly robust forequarters with very well-developed muscle attachment sites, indicating a powerful forelimb and shoulder musculature. The neck was proportionally much longer than in extant felids, and the thoracic and particularly lumbar region was proportionally shorter, mimicking the condition in other derived sabrecats from which large parts of the vertebral column is known. Megantereon probably lived in open-forest environments and preyed on cervids, which were dispatched with a shearing bite from the hypertrophied and blade-like upper canines to the throat of the prey, while the prey was held immobile with the massive forelimbs, thus minimizing the risk of damage to the fangs.  © 2007 The Linnean Society of London, Zoological Journal of the Linnean Society , 2007, 151 , 833–884.     

A new genus of Devonian tetrapod from North‐East Greenland,with new information on the lower jaw of Ichthyostega

Abstract: A new genus and species of Devonian tetrapod has been identified from material collected in 1947 from the southern slope of Mt. Celsius, Ymer Ø, North‐East Greenland. The specimen preserves both lower jaws, partial palate, premaxillae and maxillae, with a natural mould of parts of the shoulder girdle. The new taxon, Ymeria denticulata, shows differences in dentition, skull ornament and lateral line expression from both Acanthostega and Ichthyostega, but it shows a closer resemblance to the latter. A cladistic analysis not only suggests that Ymeria lies adjacent to Ichthyostega on the tetrapod stem, but also reveals substantial topological instability. As the third genus and the fifth species of tetrapod identified from North‐East Greenland, it demonstrates the high diversity of Devonian tetrapods in that region.     

THE LOWER CAMBRIAN EODISCOID TRILOBITE CALODISCUS LOBATUS FROM SWEDEN: MORPHOLOGY, ONTOGENY AND DISTRIBUTION

Abstract:  Several thousand disarticulated remains together with a few complete enrolled specimens of the lower Cambrian eodiscoid trilobite Calodiscus lobatus ( Hall, 1847 ) have been collected at two outcrop areas in Sweden. The material reveals new details of morphology and morphogenesis during ontogenetic development. Size-frequency analyses show that the material from the Fånån rivulet in Jämtland, central Sweden, represents a natural population dominated by juveniles, whereas the material from Gislövshammar in Scania, southern Sweden, has been sorted during postmortem transport. Three stages of protaspid development can be traced and defined as well as all subsequent ontogenetic stages for the cephalon, hypostome and pygidium. The early meraspid pygidium has a pronounced larval notch, which persists, though becoming progressively less distinct in later meraspides. The number of axial rings in the transitory pygidium increases throughout meraspid development until a third and final thoracic segment is liberated. During ontogeny the articulating half-rings are strongly developed, and both meraspides and holaspides were capable of full sphaeroidal enrollment and outstretched postures. The hypostome undergoes some dramatic modifications; in M0 the anterior margin is axe-shaped, by M1 the area of attachment greatly decreases and the hypostome becomes more elongated and pear-shaped, before attaining its adult form, which has an overall resemblance to that of polymerid trilobites. During ontogeny, the hypostome changes from a conterminant attachment to a natant condition, thereby mirroring hypostomal evolution within trilobites generally. The morphology, ontogeny, enrollment, hypostomal development and the presence of calcified protaspides suggest polymerid rather than agnostoid affinities of the eodiscoids.