Locomotion in Nebalia bipes: a possible model for Palaeozoic phyllocarid crustaceans

The morphofunctional aspects of locomotion in Recent phyllocarid crustaceans are presented, based on combined video observations of living specimens of the cosmopolitan nektobenthic Nebalia (Leptostraca, Nebaliidae) and scanning electron microscopy of fixed material. N. bipes is infaunal by day, showing a preference for organic-rich black muds and dim light conditions. Under natural conditions, emergence from sediment and nocturnal swimming activities are controlled by a circadian rhythm. The 1st and 2nd antennae perform the major role in digging. The carapace rostral plate acts as a ram diverting particles and preventing inputs of sediment into the carapace. Superficial burrowing may provide camouflaged shelter against predation. Swimming is accomplished by the combined action of the first four pairs of pleopods (backward metachronal flexion during the power stroke) and the well-articulated abdominal shaft (downward flap). Plumose setae present on both the pleopods and furcal rami (governed by low Reynolds numbers) behave like paddles maximizing the resistance to the water. Clusters of cuticular microscales (3-5 μm) and microdenticles are present on the external surface of the carapace and the trunk segments, respectively. Both show a uniform directional arrangement suggesting functional interpretations in relation to locomotion (e.g., to prevent back slippage during digging, to reduce turbulence in the flow layer close to the body, and/or to serve as mechanoreceptors for the detection of variation in water flow). Key features of functional importance in the locomotion of living leptostracans (natatory pleopods, a highly flexible abdomen, setulate or paddle-like furcal rami) are also recognized in Palaeozoic archaeostracan phyllocarids, suggesting that swimming was accomplished by the same pleopodal movements as described for N. bipes. Comparisons with Recent analogues (Nebaliopsis) suggest that phyllocarids with a free swimming life-style existed among the lower Palaeozoic archaeostracans (e.g., Caryocaris; Ordovician). Asymmetrical cuticular ornament in some archaeostracans indicates burrowing habits. Some Palaeozoic phyllocarids may have been occasional (possibly diurnal) mud dwellers comparable to modern nebaliids.     

CO2-mediated changes in aspen chemistry: effects on gypsy moth performance and susceptibility to virus

We investigated the effects of long-term CO₂ enrichment on foliar chemistry of quaking aspen ( Populus tremuloides ) and the consequences of chemical changes for performance of the gypsy moth ( Lymantria dispar ) and susceptibility of the gypsy moth to a nucleopolyhedrosis virus (NPV). Foliage was collected from outdoor open-top chambers and fed to insects in a quarantine rearing facility. Under enriched CO₂, levels of leaf nitrogen declined marginally, levels of starch and phenolic glycosides did not change, and levels of condensed tannins increased. Long-term bioassays revealed reduced growth (especially females), prolonged development and increased consumption in larvae fed high-CO₂ foliage but no significant differences in final pupal weights or female fecundity. Short-term bioassays showed weaker, and sex-specific, effects of CO₂ treatment on larval performance. Correlation analyses revealed strong, negative associations between insect performance and phenolic glycoside concentrations, independent of CO₂ treatment. Larval susceptibility to NPV did not differ between CO₂ treatments, suggesting that effects of this natural enemy on gypsy moths are buffered from CO₂-induced changes in foliar chemistry. Our results emphasize that the impact of enriched CO₂ on plant–insect interactions will be determined not only by how concentrations of plant compounds are altered, but also by the relevance of particular compounds for insect fitness. This work also underscores the need for studies of genetic variation in plant responses to enriched CO₂ and long-term population-level responses of insects to CO₂-induced changes in host quality.     

The use of eddy covariance to infer the net carbon dioxide uptake of Brazilian rain forest

• 1 Eddy covariance measurements of CO₂ flux, based on four and six week campaigns in Rondôdnia, Brazil, have been used in conjunction with a model to scale up data to a whole year, and thus estimate the carbon balance of the tropical forest ecosystem, and the changes in carbon balance expected from small interannual variations in climatological conditions.
• 2 One possible source of error in this estimation arises from the difficulty in measuring fluxes under stably stratified meteorological conditions, such as occur frequently at night. Flux may be ‘lost’ because of low velocity advection, caused by nocturnal radiative cooling at sites on raised ground. Such effects may be detected by plotting the net ecosystem flux of CO₂, F_eco is a function of wind speed. If flux is ‘lost’ then F_eco is expected to decline with wind speed. In the present data set, this did not occur, and F_eco was similar to the nocturnal flux estimated independently from chamber measurements.
• 3 The model suggests that in 1992/3, the Gross Primary Productivity (GPP) was 203.3 mol C m^?2 y^?1 and ecosystem respiration was 194.8 mol C m^?2 y^?1, giving an ecosystem carbon balance of 8.5 mol C m^?2 y^?1, equivalent to a sink of 1.0 ton C ha^?1 y^?1. However, the sign and magnitude of this figure is very sensitive to temperature, because of the strong influence of temperature on respiration.
• 4 The model also suggests that the effect of temperature on the net carbon balance is strongly dependent on the partial pressure of CO₂.

     

Natural 15N abundance of vegetation and soil in the Kapalga savanna,Australia

Abstract The natural abundance of the stable isotope ¹⁵N was measured in different vegetation components and in the soil of a northern Australian savanna. Most of the vegetation was found to be ¹⁵N-depleted compared to atmospheric N₂. Herbaceous legumes, perennial grasses, tree legumes, non-legume trees and annual grasses exhibited mean δ¹⁵N of ? 1.7, ? 0.8, ? 0.7, 0.0 and + 0.3‰, respectively. These results are in good agreement with previous studies. Legumes exhibit slightly negative values, indicating that they are likely to be nitrogen-fixing plants. Non-legume plants have a δ¹⁵N close to zero, which could equally result from non-symbiotic fixation, soil organic matter mineralization, or fresh root litter mineralization. In contrast, soil organic matter was ¹⁵N-enriched. Values of δ¹⁵N increased with depth and were + 2.5, + 5.2 and +6.1‰ in the 0–10, 10–20 and 20–40cm layers, respectively. Soil organic matter δ¹⁵N shows a typical profile of mature soils.     

Lakes of south-western Uganda

Lake Bunyonyi was formed about 18,000 years B.P. by a volcanic eruption which blocked a steep-sided valley. Earlier this century fish were introduced into the lake but recently there have been mass fish deaths. Although the thermocline was inconspicuous, density profiles showed the lake to the stratified and chemical evidence suggested stratification was for many years. The water was clear with little plankton and the epilimnioncontained low concentrations of dissolved mineral ions. The hypolimnion was anoxic and had a relatively high mineral ion concentration. The mass fish deaths were attributed to a violent shallow mixing, probably caused by wind, but mixing was insufficient to remineralize the epilimnion.     

Breeding site fidelity and natal philopatry in the Redshank Tringa totanus

This paper presents the results of a study carried out on breeding Redshank in the Ribble Marshes, Lancashire, England.
Redshank tend to return to the same breeding area year after year. There was no detectable sex bias in return rates. Experienced birds were more site faithful than inexperienced birds, with previously successful birds exhibiting the highest degree of breeding site fidelity. Older, more experienced birds were more successful at hatching eggs than inexperienced birds.
Breeding dispersal was the same both within and between years. Faithful pairs and males nesting with a new mate dispersed significantly shorter distances than females nesting with a new partner. Dispersal distances in female Redshank were affected by breeding success: unsuccessful females, nesting with a new mate, dispersed significantly farther than successful females. A pair's breeding success influenced the following year's mate fidelity. However, other factors such as overwintering survival and date of return may also have influenced mate fidelity.
Redshank were highly faithful to their natal area; a high proportion of birds that survived post-fledging mortality returned to breed in their area of birth. No sex bias in natal dispersal was detected. Approximately 50% of Redshank breed in their first year of life.     

The Distribution of Elongation Factor-1 Alpha (EF-1α), Elongation Factor-Like (EFL), and a Non-Canonical Genetic Code in the Ulvophyceae: Discrete Genetic Characters Support a Consistent Phylogenetic Framework

ABSTRACT. The systematics of the green algal class Ulvophyceae have been difficult to resolve with ultrastructural and molecular phylogenetic analyses. Therefore, we investigated relationships among ulvophycean orders by determining the distribution of two discrete genetic characters previously identified only in the order Dasycladales. First, Acetabularia acetabulum uses the core translation GTPase Elongation Factor 1α (EF-1α) while most Chlorophyta instead possess the related GTPase Elongation Factor-Like (EFL). Second, the nuclear genomes of dasycladaleans A. acetabulum and Batophora oerstedii use a rare non-canonical genetic code in which the canonical termination codons TAA and TAG instead encode glutamine. Representatives of Ulvales and Ulotrichales were found to encode EFL, while Caulerpales, Dasycladales, Siphonocladales, and Ignatius tetrasporus were found to encode EF-1α, in congruence with the two major lineages previously proposed for the Ulvophyceae. The EF-1α of I. tetrasporus supports its relationship with Caulerpales/Dasycladales/Siphonocladales, in agreement with ultrastructural evidence, but contrary to certain small subunit rRNA analyses that place it with Ulvales/Ulotrichales. The same non-canonical genetic code previously described in A. acetabulum was observed in EF-1α sequences from Parvocaulis pusillus (Dasycladales), Chaetomorpha coliformis , and Cladophora cf. crinalis (Siphonocladales), whereas Caulerpales use the universal code. This supports a sister relationship between Siphonocladales and Dasycladales and further refines our understanding of ulvophycean phylogeny.     

Characterization of 16 highly variable tetranucleotide microsatellite loci for Oregon chub (Oregonichthys crameri) and cross amplification in Umpqua chub (O. kalawatseti)

We describe the isolation and development of 16 polymorphic tetranucleotide microsatellite loci for the endangered Oregon chub (Oregonichthys crameri). Two loci appear to be duplicated. For the remaining 14 loci, we observed between three and 19 alleles per locus in a sample of 42 fish. Thirteen of these loci were also polymorphic in the closely related Umpqua chub (O. kalawatseti). These loci will aid in our understanding of the molecular ecology and conservation of these two species.     

The Parvidrilidae – a diversified groundwater family: description of six new species from southern Europe,and clues for its phylogenetic position within Clitellata (Annelida)

The Parvidrilidae Erséus, 1999 constitute the most recently described family of oligochaete microdriles. Prior to this study, Parvidrilus strayeri Erséus, 1999, and Parvidrilus spelaeus Martínez‐Ansemil, Sambugar & Giani, 2002, found in groundwaters of the USA (Alabama) and Europe (Slovenia and Italy), respectively, were the only two species in this family. In this paper, six new species – Parvidrilus camachoi , Parvidrilus gianii , Parvidrilus jugeti , Parvidrilus meyssonnieri , Parvidrilus stochi , and Parvidrilus tomasini – and Parvidrilus gineti (Juget, 1959) comb. nov. are added to the family. With all species being stygobiont, the Parvidrilidae is unique in being the only family of oligochaetes worldwide comprising taxa that are restricted to groundwater habitats. Parvidrilids are exceedingly small worms whose principal morphological characteristics are the presence of hair setae in ventral bundles, the markedly posterior position of setae within the segments, the presence of mid‐dorsal glandular pouches in mesosomial segments, the lateral development of the clitellum, the presence of a single male pore in segment XII, and the presence (or absence) of a single spermatheca. The phylogenetic relationships of the Parvidrilidae within the Clitellata were investigated using the nuclear 18S rRNA gene, and the most representative and taxonomically balanced data set of clitellate families available to date. The data were analysed by parsimony, maximum likelihood, and Bayesian inference. Irrespective of the method used, Parvidrilidae were placed far from Capilloventridae, one family once suggested to be closely related to parvidrilids. Although closer to Enchytraeidae than Phreodrilidae, two other suggested putative sister families, the exact position of Parvidrilidae within Clitellata still remained uncertain in the absence of branch support. The examination of reproductive structures, together with the similarity of other important anatomical traits of the new species herein described, reinforced the idea that phreodrilids were the best candidate to be the sister group to parvidrilids on morphological grounds. A fragment of the mitochondrial cytochrome oxidase I gene, used as a barcode, also genetically characterized a few Parvidrilus species. The observation that two species diverge from each other by high genetic distances, even though their type localities are more or less only 100 km apart, is interpreted in the context of low dispersal abilities of inhabitants of the subterranean aquatic ecosystem, and habitat heterogeneity. The Parvidrilidae appear to be a diversified, Holarctic, and probably widely distributed family in groundwater, but very often overlooked because of the small size and external similarity with the polychaete family Aeolosomatidae of its members. © 2012 The Linnean Society of London, Zoological Journal of the Linnean Society, 2012, 166 , 530–558.