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1.
Katrin Kausch Clemens R. Müller Tiemo Grimm Kenneth Ricker Marcella Rietschel Sabine Rudnik-Schöneborn Klaus Zerres 《Human genetics》1991,86(3):317-318
Summary Two recent articles have reported the linkage of a gene for recessive spinal muscular atrophy (SMA) on the chromosome region 5q11.2–13.3. Our data show no linkage of the dominantly inherited forms of SMA to this chromosome region. 相似文献
2.
Katrin Lineruth 《Genetica》1986,78(1):33-37
The protein synthesis pattern of a set of stage and tissue specific proteins has previously been described in Drosophila melanogaster. The analysis of this set of follicle cell proteins (Fc proteins) is here extended to cover several sibling species of Drosophila melanogaster, namely D. simulans, D. mauritiana, D. erecta and D. yakuba. Even though a similar set of proteins were synthesized in these species, minor differences in size of the proteins were found between the species. Some of the species exhibited variation within species. 相似文献
3.
Ulrich Nowitzki Ralf Wyrich Peter Westhoff Katrin Henze Claus Schnarrenberger William Martin 《Plant molecular biology》1995,29(6):1279-1291
Exploiting the differential expression of genes for Calvin cycle enzymes in bundle-sheath and mesophyll cells of the C4 plant Sorghum bicolor L., we isolated via subtractive hybridization a molecular probe for the Calvin cycle enzyme d-ribulose-5-phosphate 3-epimerase (R5P3E) (EC 5.1.3.1), with the help of which several full-size cDNAs were isolated from spinach. Functional identity of the encoded mature subunit was shown by R5P3E activity found in affinity-purified glutatione S-transferase fusions expressed in Escherichia coli and by three-fold increase of R5P3E activity upon induction of E. coli overexpressing the spinach subunit under the control of the bacteriophage T7 promoter, demonstrating that we have cloned the first functional ribulose-5-phosphate 3-epimerase from any eukaryotic source. The chloroplast enzyme from spinach shares about 50% amino acid identity with its homologues from the Calvin cycle operons of the autotrophic purple bacteria Alcaligenes eutrophus and Rhodospirillum rubrum. A R5P3E-related eubacterial gene family was identified which arose through ancient duplications in prokaryotic chromosomes, three R5P3E-related genes of yet unknown function have persisted to the present within the E. coli genome. A gene phylogeny reveals that spinach R5P3E is more similar to eubacterial homologues than to the yeast sequence, suggesting a eubacterial origin for this plant nuclear gene.Abbreviations R5P3E
d-ribulose-5-phosphate 3-epimerase
- RPI
ribose-5-phosphate isomerase
- TKL
transketolase
- PRK
phosphoribulokinase
- GAPDH
glyceraldehyde-3-phosphate dehydrogenase
- FBP
fructose-1,6-bisphophatase
- FBP
fructose 1,6-bisphosphate
- G6PDH
glucose-6-phosphate dehydrogenase
- 6PGDH
6-phosphogluconate dehydrogenase
- OPPP
oxidative pentose phosphate pathway
- Rubisco
ribulose-1,5-bisphosphate carboxylase/oxygenase
- FBA
fructose-1,6-bisphophate aldolase
- IPTG
isopropyl -d-thiogalactoside
- GST
glutathione S-tranferase
- PBS
phosphate-buffered saline
- TPI
triosephosphate isomerase 相似文献
4.
Zur Nahrungs?kologie des Wei?storchs (Ciconia ciconia) in Oberschwaben: Beobachtungen an zwei Paaren
Katrin B?hning-Gaese 《Journal of Ornithology》1992,133(1):61-71
Zusammenfassung Das Nahrungssuchverhalten zweier Weißstorch-Paare wurde durch systematische Beobachtung der Störche im Gelände erfaßt. Das Storchenpaar mit gutem Grünlandangebot in der Nähe des Nestes und kleiner Jungenzahl hatte während der ganzen Brutsaison viel Freizeit. Es suchte in einem Entfernungsbereich bis 1,5 km vom Nest Futter und wandte fast ausschließlich die profitable Mäusejagd an. Das Storchenpaar mit schlechtem Grünlandangebot in der Nähe des Nestes und relative großer Jungenzahl nutzte während der Jungenaufzucht einen Großteil der Helligkeitsperiode zur Futtersuche. Es dehnte dabei seinen Entfernungsbereich bis 3,8 km vom Nest aus und ging bei gutem Regenwurmangebot in nahen Entfernungen zum Nest auch der unprofitablen Regenwurmjagd nach. Die Nahrungsaufnahme der Störche betrug während der Brutphase etwa 2600 kJ, während der Aufzucht von ein bis zwei Jungen ungefähr 8850 kJ pro Storch und Tag.
On the feeding ecology of the White stork (Ciconia ciconia) in Obserschwaben (Baden-Württemberg, Germany): observations on two pairs
Summary The foraging behaviour of two pairs of White storks was recorded by rigorous observations in the field. One pair of storks, with many meadows in the vicinity of their nest and a small clutch size, spent much time resting throughout the breeding season. They searched for food within a range of 1.5 km from the nest and used the profitable mouse hunting method almost exclusively. When rearing its young, the other pair of storks, with few meadows in the vicinity of their nest and a relatively large clutch size, used a large part of the daylight period for foraging. Thus they expanded their range up to 3.8 km from the nest. When earthworms were abundant, they also used the unprofitable earthworm hunting method within short distances from the nest. The daily energy intake per stork during incubation was approximately 2600 kJ, and approximately 8850 kJ when rearing young.相似文献
5.
Wolf Heusermann Justin Hean Dominic Trojer Emmanuelle Steib Stefan von Bueren Alexandra Graff-Meyer Christel Genoud Katrin Martin Nicolas Pizzato Johannes Voshol David V. Morrissey Samir E.L. Andaloussi Matthew J. Wood Nicole C. Meisner-Kober 《The Journal of cell biology》2016,213(2):173-184
Exosomes are nanovesicles released by virtually all cells, which act as intercellular messengers by transfer of protein, lipid, and RNA cargo. Their quantitative efficiency, routes of cell uptake, and subcellular fate within recipient cells remain elusive. We quantitatively characterize exosome cell uptake, which saturates with dose and time and reaches near 100% transduction efficiency at picomolar concentrations. Highly reminiscent of pathogenic bacteria and viruses, exosomes are recruited as single vesicles to the cell body by surfing on filopodia as well as filopodia grabbing and pulling motions to reach endocytic hot spots at the filopodial base. After internalization, exosomes shuttle within endocytic vesicles to scan the endoplasmic reticulum before being sorted into the lysosome as their final intracellular destination. Our data quantify and explain the efficiency of exosome internalization by recipient cells, establish a new parallel between exosome and virus host cell interaction, and suggest unanticipated routes of subcellular cargo delivery. 相似文献
6.
7.
Mitochondria are amazingly dynamic organelles. They continuously move along cytoskeletal tracks and frequently fuse and divide. These processes are important for maintenance of mitochondrial functions, for inheritance of the organelles upon cell division, for cellular differentiation and for apoptosis. As the machinery of mitochondrial behavior has been highly conserved during evolution, it can be studied in simple model organisms, such as yeast. During the past decade, several key components of mitochondrial dynamics have been identified and functionally characterized in Saccharomyces cerevisiae. These include the mitochondrial fusion and fission machineries and proteins required for maintenance of tubular shape and mitochondrial motility. Taken together, these findings reveal a comprehensive picture that shows the cellular processes and molecular components required for mitochondrial inheritance and morphogenesis in a simple eukaryotic cell. 相似文献
8.
Lineage-specific evolution and gene flow in Listeria monocytogenes are independent of bacteriophages
Roxana Zamudio Richard D. Haigh Joseph D. Ralph Megan De Ste Croix Taurai Tasara Katrin Zurfluh Min Jung Kwun Andrew D. Millard Stephen D. Bentley Nicholas J. Croucher Roger Stephan Marco R. Oggioni 《Environmental microbiology》2020,22(12):5058-5072
Listeria monocytogenes is a foodborne pathogen causing systemic infection with high mortality. To allow efficient tracking of outbreaks a clear definition of the genomic signature of a cluster of related isolates is required, but lineage-specific characteristics call for a more detailed understanding of evolution. In our work, we used core genome MLST (cgMLST) to identify new outbreaks combined to core genome SNP analysis to characterize the population structure and gene flow between lineages. Whilst analysing differences between the four lineages of L. monocytogenes we have detected differences in the recombination rate, and interestingly also divergence in the SNP differences between sub-lineages. In addition, the exchange of core genome variation between the lineages exhibited a distinct pattern, with lineage III being the best donor for horizontal gene transfer. Whilst attempting to link bacteriophage-mediated transduction to observed gene transfer, we found an inverse correlation between phage presence in a lineage and the extent of recombination. Irrespective of the profound differences in recombination rates observed between sub-lineages and lineages, we found that the previously proposed cut-off of 10 allelic differences in cgMLST can be still considered valid for the definition of a foodborne outbreak cluster of L. monocytogenes. 相似文献
9.
Caroline J. Rose Katrin Hammerschmidt Yuriy Pichugin Paul B. Rainey 《Ecology letters》2020,23(9):1380-1390
The evolutionary transition to multicellularity has occurred on numerous occasions, but transitions to complex life forms are rare. Here, using experimental bacterial populations as proxies for nascent multicellular organisms, we manipulate ecological factors shaping the evolution of groups. Groups were propagated under regimes requiring reproduction via a life cycle replete with developmental and dispersal (propagule) phases, but in one treatment lineages never mixed, whereas in a second treatment, cells from different lineages experienced intense competition during the dispersal phase. The latter treatment favoured traits promoting cell growth at the expense of traits underlying group fitness – a finding that is supported by results from a mathematical model. Our results show that the transition to multicellularity benefits from ecological conditions that maintain discreteness not just of the group (soma) phase, but also of the dispersal (germline) phase. 相似文献
10.
BiPPred: Combined sequence‐ and structure‐based prediction of peptide binding to the Hsp70 chaperone BiP 下载免费PDF全文
Manuel Glaser Atanas Patronov Harpreet Shah Katrin Christiane Back Marina Angelika Daake Johannes Buchner Iris Antes 《Proteins》2016,84(10):1390-1407
Substrate binding to Hsp70 chaperones is involved in many biological processes, and the identification of potential substrates is important for a comprehensive understanding of these events. We present a multi‐scale pipeline for an accurate, yet efficient prediction of peptides binding to the Hsp70 chaperone BiP by combining sequence‐based prediction with molecular docking and MMPBSA calculations. First, we measured the binding of 15mer peptides from known substrate proteins of BiP by peptide array (PA) experiments and performed an accuracy assessment of the PA data by fluorescence anisotropy studies. Several sequence‐based prediction models were fitted using this and other peptide binding data. A structure‐based position‐specific scoring matrix (SB‐PSSM) derived solely from structural modeling data forms the core of all models. The matrix elements are based on a combination of binding energy estimations, molecular dynamics simulations, and analysis of the BiP binding site, which led to new insights into the peptide binding specificities of the chaperone. Using this SB‐PSSM, peptide binders could be predicted with high selectivity even without training of the model on experimental data. Additional training further increased the prediction accuracies. Subsequent molecular docking (DynaDock) and MMGBSA/MMPBSA‐based binding affinity estimations for predicted binders allowed the identification of the correct binding mode of the peptides as well as the calculation of nearly quantitative binding affinities. The general concept behind the developed multi‐scale pipeline can readily be applied to other protein‐peptide complexes with linearly bound peptides, for which sufficient experimental binding data for the training of classical sequence‐based prediction models is not available. Proteins 2016; 84:1390–1407. © 2016 Wiley Periodicals, Inc. 相似文献