Adjustments in hydraulic architecture of Pinus palustris maintain similar stomatal conductance in xeric and mesic habitats

We investigated relationships between whole-tree hydraulic architecture and stomatal conductance in Pinus palustris Mill. (longleaf pine) across habitats that differed in soil properties and habitat structure. Trees occupying a xeric habitat (characterized by sandy, well-drained soils, higher nitrogen availability and lower overstory tree density) were shorter in stature and had lower sapwood-to-leaf area ratio (A(S):A(L)) than trees in a mesic habitat. The soil-leaf water potential gradient (psiS - psiL) and leaf-specific hydraulic conductance (kL) were similar between sites, as was tissue-specific hydraulic conductivity (Ks) of roots. Leaf and canopy stomatal conductance (gs and Gs, respectively) were also similar between sites, and they tended to be somewhat higher at the xeric site during morning hours when vapour pressure deficit (D) was low. A hydraulic model incorporating tree height, A(S):A(L) and psiS-psiL accurately described the observed variation in individual tree G(Sref) (G(S) at D = 1 kPa) across sites and indicated that tree height was an important determinant of G(Sref) across sites. This, combined with a 42% higher root-to-leaf area ratio (A(R):A(L)) at the xeric site, suggests that xeric site trees are hydraulically well equipped to realize equal--and sometimes higher potential for conductance compared with trees on mesic sites. However, a slightly more sensitive stomatal closure response to increasing D observed in xeric site trees suggests that this potential for higher conductance may only be reached when D is low and when the capacity of the hydraulic system to supply water to foliage is not greatly challenged.     

Seamless deletion of a large DNA fragment in the taxol-producing fungus Pestalotiopsis microspora

To reduce the unnecessary gene clusters in the taxol-producing fungus Pestalotiopsis microspora, we report the development of an effective DNA deletion method that relies on a deletion cassette constructed with the Gateway-technique and overlap extension PCR, using the orotidine 5′-phosphate decarboxylase as recyclable marker for selection. By this approach, two adjacent DNA sequences can be sequentially deleted in a single transformation mediated by Agrobacterium tumefaciens, resulting in the deletion of a large DNA fragment. Additionally, the selection marker is spontaneously eliminated in this process. We used this method to successfully remove the mus53 locus of P. microspora.     

Informing climate models with rapid chamber measurements of forest carbon uptake

Models predicting ecosystem carbon dioxide (CO₂) exchange under future climate change rely on relatively few real‐world tests of their assumptions and outputs. Here, we demonstrate a rapid and cost‐effective method to estimate CO₂ exchange from intact vegetation patches under varying atmospheric CO₂ concentrations_. We find that net ecosystem CO₂ uptake (NEE) in a boreal forest rose linearly by 4.7 ± 0.2% of the current ambient rate for every 10 ppm CO₂ increase, with no detectable influence of foliar biomass, season, or nitrogen (N) fertilization. The lack of any clear short‐term NEE response to fertilization in such an N‐limited system is inconsistent with the instantaneous downregulation of photosynthesis formalized in many global models. Incorporating an alternative mechanism with considerable empirical support – diversion of excess carbon to storage compounds – into an existing earth system model brings the model output into closer agreement with our field measurements. A global simulation incorporating this modified model reduces a long‐standing mismatch between the modeled and observed seasonal amplitude of atmospheric CO₂. Wider application of this chamber approach would provide critical data needed to further improve modeled projections of biosphere–atmosphere CO₂ exchange in a changing climate.     

Hydrologic balance in an intact temperate forest ecosystem under ambient and elevated atmospheric CO2 concentration

Abstract Increasing atmospheric CO₂ concentration decreases stomatal conductance in many species, but the savings of water from reduced transpiration may permit the forest to retain greater leaf area index (L). Therefore, the net effect on water use in forest ecosystems under a higher CO₂ atmosphere is difficult to predict. The free air CO₂ enrichment (FACE) facility (n = 3) in a 14‐m tall (in 1996) Pinus taeda L. stand was designed to reduce uncertainties in predicting such responses. Continuous measurements of precipitation, throughfall precipitation, sap flux, and soil moisture were made over 3.5 years under ambient (CO₂^a) and elevated (CO₂^e) ambient + 200 µmol mol^?1). Annual stand transpiration under ambient CO₂ conditions accounted for 84–96% of latent heat flux measured with the eddy‐covariance technique above the canopy. Under CO₂^e, P. taeda transpired less per unit of leaf area only when soil drought was severe. Liquidambar styraciflua, the other major species in the forest, used progressively less water, settling at 25% reduction in sap flux density after 3.5 years under CO₂^e. Because P. taeda dominated the stand, and severe drought periods were of relatively short duration, the direct impact of CO₂^e on water savings in the stand was undetectable. Moreover, the forest used progressively more water under CO₂^e, probably because soil moisture availability progressively increased, probably owing to a reduction in soil evaporation caused by more litter buildup in the CO₂^e plots. The results suggest that, in this forest, the effect of CO₂^e on transpiration was greater indirectly through enhanced litter production than directly through reduced stomatal conductance. In forests composed of species more similar to L. styraciflua, water savings from stomatal closure may dominate the response to CO₂^e.     

Thermophilic and halophilic extremophiles.

The microbiology of extremely hot or saline habitats is a fast moving field with many new successes in the enrichment and isolation of new organisms and in an understanding of molecular factors that impart stability on thermostable and halophilic biomolecules. The results of these studies have shed new light on our understanding of prokaryotic diversity and structural biochemistry.     

Co-operation between the p53 protein tumor antigen and platelet-poor plasma in the induction of cellular DNA synthesis

Plasmids containing DNA sequences coding for p53 were microinjected into quiescent Swiss 3T3 cells. Three constructs were used, carrying either the whole gene sequence, a full-length cDNA, or a hybrid between the gene and the cDNA. All of them stimulated DNA synthesis when cells were incubated with platelet-poor plasma (PPP) following injection. The p53 gene stimulated DNA synthesis to a lesser extent, also in the absence of PPP. Several negative results were obtained with different plasmids, including deletion mutants in the p53 coding region. However, a deletion mutant in which the p53 reading frame ended in the middle of the coding part of the p53 gene still stimulated DNA synthesis in co-operation with PPP. The stimulation of DNA synthesis induced by p53 cDNA was more synchronous and more limited than that induced by serum. The present data suggest that p53 may act as a competence factor in cell cycle progression.     

Open channel block by Ca2+ underlies the voltage dependence of drosophila TRPL channel

The light-activated channels of Drosophila photoreceptors transient receptor potential (TRP) and TRP-like (TRPL) show voltage-dependent conductance during illumination. Recent studies implied that mammalian members of the TRP family, which belong to the TRPV and TRPM subfamilies, are intrinsically voltage-gated channels. However, it is unclear whether the Drosophila TRPs, which belong to the TRPC subfamily, share the same voltage-dependent gating mechanism. Exploring the voltage dependence of Drosophila TRPL expressed in S2 cells, we found that the voltage dependence of this channel is not an intrinsic property since it became linear upon removal of divalent cations. We further found that Ca(2+) blocked TRPL in a voltage-dependent manner by an open channel block mechanism, which determines the frequency of channel openings and constitutes the sole parameter that underlies its voltage dependence. Whole cell recordings from a Drosophila mutant expressing only TRPL indicated that Ca(2+) block also accounts for the voltage dependence of the native TRPL channels. The open channel block by Ca(2+) that we characterized is a useful mechanism to improve the signal to noise ratio of the response to intense light when virtually all the large conductance TRPL channels are blocked and only the low conductance TRP channels with lower Ca(2+) affinity are active.