Effect of pyridoxal phosphate and cysteine on δ-aminolaevulinate synthetase and dehydratase in soya

The specific activity of ALA-S extracts prepared from lyophilized soya callus growing in light or dark showed a striking increase when tissue cultures were grown in the presence of pyridoxal phosphate (PyP) in order to complex aminothiols. By contrast ALA-D specific activity in the light grown callus was reduced on incorporation of PyP into the growth medium. Cysteine (Cy) added to the culture medium did not influence the specific activities of either enzyme.     

The potential of microalgal biomass production for biotechnological purposes using wastewater resources

The utilization of microalgae for wastewater treatment represents an attractive opportunity for wastewater valorization through the use of the produced biomass. Five strains of microalgae were isolated from municipal wastewater and grown in autoclaved and non-autoclaved effluent at 30 °C and 150 μmol photons m^?2 s^?1 to study biomass production, nutrient removal, and the biochemical composition of the biomass. All strains reached high biomass productivity (35.6 to 54.2 mg dry weight L^?1 day^?1) within 4 days of batch culturing. In this period, ammonium-N and phosphate were reduced by more than 60 and 90 %, respectively. The high growth rate (0.57 to 1.06 day^?1) ensured a rapid removal of nutrients and thereby a short retention time. By the fourth day of cultivation, the algal biomass contained 32 % protein, but only 11 % lipids and 18 % carbohydrates. It was found that the biomass was a suitable raw material for biogas production by anaerobic digestion. Biodigestion of obtained biomass was simulated by employing the Aspen HYSYS modeling software, resulting in methane yields comparable to those found in the literature. The elemental analysis of the algal biomass showed very low concentrations of pollutants, demonstrating the potential of use of the digestate from biodigestion as a bio-fertilizer.     

Interrelation of Collagen Chemical Structure and Nanostructure with Firmness of three Body Regions of Jumbo Squid (<Emphasis Type="Italic">Dosidicus gigas</Emphasis>)

The chemical structure, thermal denaturation and nanostructure of collagen, obtained from a cation-exchange separation of the mantle, fins and tentacles of jumbo squid (Dosidicus gigas), were comparatively studied. The main idea of this work, was to provide an in-depth understanding of the interdependence between pyridinoline (Pyr) content, helix chemical structure and nanostructure of squid collagen with squid tissue firmness. The tentacles required more shear force and its collagen presented the higher temperature and enthalpy of transition, than the mantle and fins. The tentacle firmness may be explained by the relatively higher imino amino acid content, proline and lysine hydroxylation degrees and Pyr content of its collagen. Moreover, among the regions studied, the collagen from the tentacles had a more intense β band chain. Also, the Fourier transform infrared analysis and Raman spectra, implied that the collagen in the tentacles, was more intermolecularly ordered than the mantle and fins. Consistent with these results, a comparative evaluation of the surface morphology of the three regions, with atomic force microscopy, suggested a more ordered collagen structure in the tentacles (lower roughness values). Based on the above, collagen from tentacles has a higher degree of molecular order that sustains a higher muscle firmness compared to that of other anatomical regions.     

Inhibitory autophosphorylation of CaMKII controls PSD association,plasticity, and learning

To investigate the function of the alpha calcium-calmodulin-dependent kinase II (alphaCaMKII) inhibitory autophosphorylation at threonines 305 and/or 306, we generated knockin mice that express alphaCaMKII that cannot undergo inhibitory phosphorylation. In addition, we generated mice that express the inhibited form of alphaCaMKII, which resembles the persistently phosphorylated kinase at these sites. Our data demonstrate that blocking inhibitory phosphorylation increases CaMKII in the postsynaptic density (PSD), lowers the threshold for hippocampal long-term potentiation (LTP), and results in hippocampal-dependent learning that seems more rigid and less fine-tuned. Mimicking inhibitory phosphorylation dramatically decreased the association of CaMKII with the PSD and blocked both LTP and learning. These data demonstrate that inhibitory phosphorylation has a critical role in plasticity and learning.     

Anthropogenic Metal Content and Natural Background of Overbank Sediments from the Mining District of Guanajuato,Mexico

In many mining districts, metal pollutants from mine tailings have historically been dumped into local streams. The purpose of this study was to determine the concentrations of Pb, Cu, Zn, Mo, Sb, Cs, Cr, Sc, Co, Ni, and Li in eight overbank-sediment profiles from the Guanajuato River, in the Guanajuato mining district and to establish geochemical background values using direct and indirect methods. The background levels calculated using the direct method in pristine overbank deposits were similar to or slightly higher than the upper crustal values for Sc, Cr, Co, Ni, Zn, and Mo (17.3, 108.7, 18.7, 44.4, 97.2, and 1.1 mg/kg, respectively). In contrast, levels of Cu, Cs, and Pb were up to two times higher than crustal values (93.1, 11.2, and 37.5 mg/kg, respectively), and the median concentration of Sb was 8.2 mg/kg, up to 20 times the crustal level. These natural anomalies can be explained by the presence of mineral deposits in the Guanajuato mining district. Ni and Cr were provided by the ultramafic rocks of the Sierra de Guanajuato. The geochemical backgrounds established with the indirect method of Sc, Cr, Co, Ni, and Mo were lower than those found in the natural background. Moreover, the geochemical backgrounds established with the indirect method of Cu, Zn, Sb, Cs, and Pb were higher than those found in the geochemical background established with the direct method. Contamination levels calculated by the geoaccumulation index (Igeo) indicated moderate to strong contamination for Cu, Zn, Sb, and Pb in more than half of the samples. This contamination may be attributable to historical discharges of mine tailings in the Guanajuato River and the use of Cu during the metallurgical process of amalgamation. Our results provide evidence that anthropogenic metals stored in the fluvial plain of the Guanajuato River represent a major potential source of pollutants to surface and groundwaters downstream from the study area in the Lerma-Santiago basin.     

Racial and tissue-specific cancer risk associated with PARP1 (ADPRT) Val762Ala polymorphism: a meta-analysis

The Val762Ala polymorphism poly [ADP-ribose] polymerase 1 (PARP1) gene [ADPRT (adenosine diphosphate ribosyltransferase) gene] affects enzymatic activity, which modulates cancer susceptibility among human populations. Individual data on 13,745 cases and 16,947 controls from 28 published case–control studies were re-evaluated. Odds ratios (OR) were estimated for ethnic group, cancer type, smoking joint effects and studies confined to the Hardy–Weinberg equilibrium. We applied subgroup, sensitivity and outlier analyses as well as the Bonferroni correction for multiple testing. The results show strong evidence that the variant (C) allele confers significant increased risk in the Chinese (OR 1.20–1.44, P?<?0.0001–0.002), exacerbated by smoking (OR 1.66–2.53, P?<?0.0001) and joint interaction with XRCC1 Arg399Gln (OR 1.39, P?<?0.0001) as well as adjustment for tumor type (gastric carcinoma ORs 1.39–2.01, P?<?0.0001). These significant effects were unaltered following conservative correction for multiple tests. By contrast, this procedure erased the protective significance in Caucasians, but not in two American subgroups, (i) those in the brain tumor category (0.77–0.79, P?<?0.0001) and (ii) smokers in the dominant model (OR 0.86, P?<?0.0001). These differential findings between the two ethnicities maybe correlated with significantly (P?<?0.0001) greater allele frequency of the variant allele (C) among the Chinese compared to Caucasians. Our racial and tissue-specific summary estimates imply consideration of the Val762Ala polymorphism as candidate gene marker for screening cancer patients’ best suited for PARP inhibitor therapy.     

Phosphodiesterase isoform‐specific expression induced by traumatic brain injury

Traumatic brain injury (TBI) results in significant inflammation which contributes to the evolving pathology. Previously, we have demonstrated that cyclic AMP (cAMP), a molecule involved in inflammation, is down‐regulated after TBI. To determine the mechanism by which cAMP is down‐regulated after TBI, we determined whether TBI induces changes in phosphodiesterase (PDE) expression. Adult male Sprague Dawley rats received moderate parasagittal fluid‐percussion brain injury (FPI) or sham injury, and the ipsilateral, parietal cortex was analyzed by western blotting. In the ipsilateral parietal cortex, expression of PDE1A, PDE4B2, and PDE4D2, significantly increased from 30 min to 24 h post‐injury. PDE10A significantly increased at 6 and 24 h after TBI. Phosphorylation of PDE4A significantly increased from 6 h to 7 days post‐injury. In contrast, PDE1B, PD4A5, and PDE4A8 significantly decreased after TBI. No changes were observed with PDE1C, PDE3A, PDE4B1/3, PDE4B4, PDE4D3, PDE4D4, PDE8A, or PDE8B. Co‐localization studies showed that PDE1A, PDE4B2, and phospho‐PDE4A were neuronally expressed, whereas PDE4D2 was expressed in neither neurons nor glia. These findings suggest that therapies to reduce inflammation after TBI could be facilitated with targeted therapies, in particular for PDE1A, PDE4B2, PDE4D2, or PDE10A.     

Activation of moesin, a protein that links actin cytoskeleton to the plasma membrane, occurs by phosphatidylinositol 4,5-bisphosphate (PIP2) binding sequentially to two sites and releasing an autoinhibitory linker

Many cellular processes depend on ERM (ezrin, moesin, and radixin) proteins mediating regulated linkage between plasma membrane and actin cytoskeleton. Although conformational activation of the ERM protein is mediated by the membrane PIP2, the known properties of the two described PIP2-binding sites do not explain activation. To elucidate the structural basis of possible mechanisms, we generated informative moesin mutations and tested three attributes: membrane localization of the expressed moesin, moesin binding to PIP2, and PIP2-induced release of moesin autoinhibition. The results demonstrate for the first time that the POCKET containing inositol 1,4,5-trisphosphate on crystal structure (the "POCKET" Lys-63, Lys-278 residues) mediates all three functions. Furthermore the second described PIP2-binding site (the "PATCH," Lys-253/Lys-254, Lys-262/Lys-263) is also essential for all three functions. In native autoinhibited ERM proteins, the POCKET is a cavity masked by an acidic linker, which we designate the "FLAP." Analysis of three mutant moesin constructs predicted to influence FLAP function demonstrated that the FLAP is a functional autoinhibitory region. Moreover, analysis of the cooperativity and stoichiometry demonstrate that the PATCH and POCKET do not bind PIP2 simultaneously. Based on our data and supporting published data, we propose a model of progressive activation of autoinhibited moesin by a single PIP2 molecule in the membrane. Initial transient binding of PIP2 to the PATCH initiates release of the FLAP, which enables transition of the same PIP2 molecule into the newly exposed POCKET where it binds stably and completes the conformational activation.     

Evolutionary ecology of Agave: distribution patterns,phylogeny, and coevolution (an homage to Howard S. Gentry)

With more than 200 species, the genus Agave is one of the most interesting and complex groups of plants in the world, considering for instance its great diversity and adaptations. The adaptations include the production of a single, massive inflorescence (the largest among plants) where after growing for many years, sometimes more than 30, the rosette dies shortly afterward, and the remarkable coevolution with their main pollinators, nectarivorous bats, in particular of the genus Leptonycteris. The physiological adaptations of Agave species include a photosynthetic metabolism that allows efficient use of water and a large degree of succulence, helping to store water and resources for their massive flowering event. Ecologically, the agaves are keystone species on which numerous animal species depend for their subsistence due to the large amounts of pollen and nectar they produce, that support many pollinators, including bats, perching birds, hummingbirds, moths, and bees. Moreover, in many regions of Mexico and in the southwestern United States, agaves are dominant species. We describe the contributions of H. S. Gentry to the understanding of agaves and review recent advances on the study of the ecology and evolution of the genus. We analyze the present and inferred past distribution patterns of different species in the genus, describing differences in their climatic niche and adaptations to dry conditions. We interpret these patterns using molecular clock data and phylogenetic analyses and information of their coevolving pollinators and from phylogeographic, morphological, and ecological studies and discuss the prospects for their future conservation and management.