Diversity and ecology of algae from the Nahal Qishon river,northern Israel

In 59 samples of periphyton and phytoplankton collected in 2002 - 2003 from the Nahal Qishon (Qishon River), northern Israel, we found 178 species from seven divisions of algae and cyanoprocaryotes. Diatoms, clorophytes, and cyanoprocaryotes prevail. Nitzschia and Navicula (Bacillariophyta) are the most abundant. Most of the species are cosmopolitan or widespread, except Lagynion janei (Chrysophyta), which is endemic for the Mediterranean Realm. About 17% of species (26) are new for Israel and five of them represent the first recorded genera: Crinalium endophyticum Crow, Actinocyclus normanii (Gregory) Hustedt, Rhizoclonium hieroglyphicum (Agardh) Kütz (Chlorophyta), Lagynion janei Bourelly, and Stylococcus aureus Chodat. Most of them come from a rare riverine assemblage with red alga Audouinella pygmea, as well as from the estuarine assemblage. Alkaliphiles predominate among the indicators of acidity, with few acidophiles confined to the communities under the impact of industrial wastes. Among the indicators of salinity, most numerous are the oligohalobien-indifferents and species adapted to a moderate salinity level. The relative species richness of ecological groups and the indices of saprobity are correlated with changes in conductivity, pH, and N-nitrate concentration. Indicators of organic pollution fall in the range of betameso- to alfamesosaprobic self-purification grades. Our studies show ecological significance of the Nahal Qishon as a model for a strongly disturbed aquatic ecosystem in the coastal zone of eastern Mediterranean.     

Muskrat predation on a diverse unionid mussel community: impacts of prey species composition,size and shape

1. The muskrat, Ondatra zibethicus, is a predator known to affect species composition, population size and age structure of freshwater unionid mussel communities. Muskrats leave large piles of dead shells (middens) on the edges of rivers, lakes and streams. We compared the species composition and size structure of shells collected from muskrat middens to the nearby live unionid community in the lower Licking River (Kentucky, USA). 2. Like previous studies, our results suggest that muskrats are both size‐selective and species‐specific predators; however, our results indicate that mussel shape is also an important factor. 3. We generated a shape metric (‘cubocity’) sensitive to the overall shape of the mussel. Species with relatively lower cubocity values (around 0.85) are plate‐like or spike‐like, while mussels with more cuboidal shells have higher cubocity values (near 1.0). 4. Our results suggest muskrats prefer cuboidal mussels and generally avoid spike‐shaped mussels. The endangered fanshell, Cyprogenia stegaria, was the most favoured prey; the fanshell’s relative size and shape appear to make it particularly vulnerable to muskrats. 5. We believe the predictive capabilities of this shape metric will be of benefit to those who monitor and manage threatened mussel populations.     

Source of nitrogen associated with recovery of relative growth rate in Arabidopsis thaliana acclimated to sustained cold treatment

To determine (1) whether acclimation of carbon metabolism to low temperatures results in recovery of the relative growth rate (RGR) of plants in the cold and (2) the source of N underpinning cold acclimation in Arabidopsis thaliana, we supplied plants with a nutrient solution labelled with ¹⁵N and subjected them to a temperature shift (from 23 to 5 °C). Whole‐plant RGR of cold‐treated plants was initially less than 30% of that of warm‐maintained control plants. After 14 d, new leaves with a cold‐acclimated phenotype emerged, with the RGR of cold‐treated plants increasing by 50%; there was an associated recovery of root RGR and doubling of the net assimilation rate (NAR). The development of new tissues in the cold was supported initially by re‐allocation of internal sources of N. In the longer term, the majority (80%) of N in the new leaves was derived from the external solution. Hence, both the nutrient status of the plant and the current availability of N from external sources are important in determining recovery of growth at low temperature. Collectively, our results reveal that both increased N use efficiency and increases in nitrogen content per se play a role in the recovery of carbon metabolism in the cold.     

Molecular phylogeny of Neotropical bioluminescent beetles (Coleoptera: Elateroidea) in southern and central Brazil

Bioluminescence in beetles is found mainly in the Elateroidea superfamily (Elateridae, Lampyridae and Phengodidae). The Neotropical region accounts for the richest diversity of bioluminescent species in the world with about 500 described species, most occurring in the Amazon, Atlantic rainforest and Cerrado (savanna) ecosystems in Brazil. The origin and evolution of bioluminescence, as well as the taxonomic status of several Neotropical taxa in these families remains unclear. In order to contribute to a better understanding of the phylogeny and evolution of bioluminescent Elateroidea we sequenced and analyzed sequences of mitochondrial NADH2 and the nuclear 28S genes and of the cloned luciferase sequences of Brazilian species belonging to the following genera: (Lampyridae) Macrolampis, Photuris, Amydetes, Bicellonycha, Aspisoma, Lucidota, Cratomorphus; (Elateridae) Conoderus, Pyrophorus, Hapsodrilus, Pyrearinus, Fulgeochlizus; and (Phengodidae) Pseudophengodes, Phrixothrix, Euryopa and Brasilocerus. Our study supports a closer phylogenetic relationship between Elateridae and Phengodidae as other molecular studies, in contrast with previous morphologic and molecular studies that clustered Lampyridae/Phengodidae. Molecular data also supported division of the Phengodinae subfamily into the tribes Phengodini and Mastinocerini. The position of the genus Amydetes supports the status of the Amydetinae as a subfamily. The genus Euryopa is included in the Mastinocerini tribe within the Phengodinae/Phengodidae. Copyright © 2013 John Wiley & Sons, Ltd.     

Insights into the structural nature of the transition state in the Kir channel gating pathway

In a previous study we identified an extensive gating network within the inwardly rectifying Kir1.1 (ROMK) channel by combining systematic scanning mutagenesis and functional analysis with structural models of the channel in the closed, pre-open and open states. This extensive network appeared to stabilize the open and pre-open states, but the network fragmented upon channel closure. In this study we have analyzed the gating kinetics of different mutations within key parts of this gating network. These results suggest that the structure of the transition state (TS), which connects the pre-open and closed states of the channel, more closely resembles the structure of the pre-open state. Furthermore, the G-loop, which occurs at the center of this extensive gating network, appears to become unstructured in the TS because mutations within this region have a ‘catalytic’ effect upon the channel gating kinetics.     

Ghrelin immunohistochemistry of gastric adenocarcinoma and mucoepidermoid carcinoma of salivary gland

Ghrelin (G-HH) synthesized in several tissues including salivary and stomach glands stimulates appetite in humans by modulating neuropeptide Y neurons in the hypothalamic arcuate nucleus. Loss of appetite is one of the most important symptoms of stomach cancer. We conducted a study using immunohistochemistry to determine whether salivary glands and stomach cancer tissues produce ghrelin. We determined that negative ghrelin immunohistochemistry discriminates tumors from normal tissues and may therefore further our understanding of the clinically important problem of reduced food intake and anorexia in cancer patients. Radioimmunoassay analyses confirmed that cancer cells do not produce a G-HH peptide, whereas normal cells yield this peptide.     

Inhibition of Respiration in Protoplasts from Meristematic Tissues3

Owen, J. H., Hetherington, A. M. and Wellburn, A. R. 1986. Inhibitionof respiration in protoplasts from meristematic tissues by abscisicacid in the presence of calcium ions.—J. exp. Bot. 38:498–505. A study was made of the influences of abscisic acid (ABA) andcalcium ions on mitochondrial respiration in protoplasts fromcells close to the basal intercalary meristem of light-grownbarley (Hordeum vulgare L. cv. Patty) seedlings. This respirationwas inhibited by ABA only when calcium ions were present. Thecalcium channel agonist BAY K8644 caused a significant inhibitionof protoplast dark respiration, similar to that observed usingABA and calcium, presumably because it imitated the action ofABA by increasing calcium influx into protoplasts. These resultssuggest that ABA increases the permeability of the plasmamembraneto calcium and that calcium acts as a second messenger to regulatemitochondrial respiratory activity and thus the very early eventsassociated with plastid and meristematic cell development. Key words: Abscisic acid, calcium, meristematic respiration     

The dependence of respiration on photosynthetic substrate supply and temperature: integrating leaf, soil and ecosystem measurements

Interactions between photosynthetic substrate supply and temperature in determining the rate of three respiration components (leaf, belowground and ecosystem respiration) were investigated within three environmentally controlled, Populus deltoides forest bays at Biosphere 2, Arizona. Over 2 months, the atmospheric CO₂ concentration and air temperature were manipulated to test the following hypotheses: (1) the responses of the three respiration components to changes in the rate of photosynthesis would differ both in speed and magnitude; (2) the temperature sensitivity of leaf and belowground respiration would increase in response to a rise in substrate availability; and, (3) at the ecosystem level, the ratio of respiration to photosynthesis would be conserved despite week‐to‐week changes in temperature. All three respiration rates responded to the CO₂ concentration‐induced changes in photosynthesis. However, the proportional change in the rate of leaf respiration was more than twice that of belowground respiration and, when photosynthesis was reduced, was also more rapid. The results suggest that aboveground respiration plays a key role in the overall response of ecosystem respiration to short‐term changes in canopy photosynthesis. The short‐term temperature sensitivity of leaf respiration, measured within a single night, was found to be affected more by developmental conditions than photosynthetic substrate availability, as the Q₁₀ was lower in leaves that developed at high CO₂, irrespective of substrate availability. However, the temperature sensitivity of belowground respiration, calculated between periods of differing air temperature, appeared to be positively correlated with photosynthetic substrate availability. At the ecosystem level, respiration and photosynthesis were positively correlated but the relationship was affected by temperature; for a given rate of daytime photosynthesis, the rate of respiration the following night was greater at 25 than 20°C. This result suggests that net ecosystem exchange did not acclimate to temperature changes lasting up to 3 weeks. Overall, the results of this study demonstrate that the three respiration terms differ in their dependence on photosynthesis and that, short‐ and medium‐term changes in temperature may affect net carbon storage in terrestrial ecosystems.     

Temporal heterogeneity of cold acclimation phenotypes in Arabidopsis leaves

To predict the effects of temperature changes on plant growth and performance, it is crucial to understand the impact of thermal history on leaf morphology, anatomy and physiology. Here, we document a comprehensive range of leaf phenotypes in 25/20 °C‐grown Arabidopsis thaliana plants that were shifted to 5 °C for up to 2 months. When warm‐grown, pre‐existing (PE) leaves were exposed to cold, leaf thickness increased due to an increase in mesophyll cell size. Leaves that were entirely cold‐developed (CD) were twice as thick (eight cell layers) as their warm‐developed (WD) counterparts (six layers), and also had higher epidermal and stomatal cell densities. After 4 d of cold, PE leaves accumulated high levels of total non‐structural carbohydrates (TNC). However, glucose and starch levels declined thereafter, and after 45 d in the cold, PE leaves exhibited similar TNC to CD leaves. A similar phenomenon was observed in δ¹³C and a range of photosynthetic parameters. In cold‐treated PE leaves, an increase in respiration (R_dark) with cold exposure time was evident when measured at 25 °C but not 5 °C. Cold acclimation was associated with a large increase in the ratio of leaf R_dark to photosynthesis. The data highlight the importance of understanding developmental thermal history in determining individual phenotypic traits.