Carbon source accounting for fish using combined DNA and stable isotope analyses in a regulated lowland river weir pool

Determining the source and flow of carbon, energy and nutrients through food webs is essential for understanding ecological connectivity and thus determining the impact of management practices on biodiversity. We combined DNA sequencing, microarrays and stable isotope analyses to test whether this approach would allow us to resolve the carbon flows through food webs in a weir pool on the lower Murray River, a highly impacted, complex and regulated ecosystem in southern Australia. We demonstrate that small fish in the Murray River consume a wide range of food items, but that a significant component of carbon and nitrogen entering the food web during dry periods in summer, but not spring, is derived from nonconventional sources other than in-channel primary producers. This study also showed that isotopic analyses alone cannot distinguish food sources and that a combined approach is better able to elucidate food-consumer dynamics. Our results highlight that a major river ecosystem, stressed by reduced environmental flows, can rapidly undergo significant and previously undetected changes that impact on the ecology of the system as a whole.     

Molecular phylogeny of the endemic East African flightless grasshoppers Altiusambilla Jago, Usambilla (Sjöstedt) and Rhainopomma Jago (Orthoptera: Acridoidea: Lentulidae)

Abstract.  A molecular phylogeny of endemic flightless grasshoppers is presented for the three Lentulidae genera Altiusambilla Jago, 1981 , Usambilla Sjöstedt, 1909 and Rhainopomma Jago, 1981 based on DNA sequences (16S rRNA locus). Parsimony, distance and likelihood reconstructions were performed using different assumptions on sequence evolution. The generated phylogenies agree in almost all parts of the calculated trees and support the monophyly of the observed genera. It was shown that Usambilla and Rhainopomma are more closely related to each other, Altiusambilla being a separate clade. However, the investigated East African lentulid genera are clearly separated from South African taxa, underlining the monophyly of East African genera. Usambilla olivacea is re-established. Populations of Rhainopomma montanum from the Taita Hills of Kenya and from the West Usambara mountains of Tanzania are two separate species not closely related to each other. Rhainopomma samples from the North Pare mountains of Tanzania belong to a hitherto undescribed species.     

Native oak chloroplasts reveal an ancient divide across Europe

Glacial refugia and postglacial migration are major factors responsible for the present patterns of genetic variation we see in natural populations. Traditionally postglacial history has been inferred from fossil data, but new molecular techniques permit historical information to be gleaned from present populations. The chloroplast tRNA^Leu1 intron contains regions which have been highly conserved over a billion years of chloroplast evolution. Surprisingly, in one of these regions which has remained invariant for all photosynthetic organisms so far studied, we have found intraspecific site polymorphism. This polymorphism occurs in two European oaks, Quercus robur and Q. petraea , indicating hybridisation and introgression between them. Two distinct chloroplast types occur and are distributed geographically as eastern and western forms suggesting that these oaks are each derived from at least two separate glacial refugia.     

Materials and methods for carbon dioxide and water exchange analysis§

Abstract Some of the materials which are commonly used in equipment for carbon dioxide and water exchange analysis can adsorb substantial amounts of carbon dioxide and water and, thus, may cause large experimental errors. Also presented are procedures for determining the influence of light intensity, carbon dioxide concentration, and temperature upon photosynthesis and transpiration.     

Synchrony in population counts predicts butterfly movement frequencies

1. Measuring functional connectivity, the ability of species to move between resource patches, is essential for conservation in fragmented landscapes. However, current methods are highly time consuming and expensive. 2. Population synchrony‐ the correlation in time series of counts between two long‐term population monitoring sites, has been suggested as a possible proxy measure of functional connectivity. To date, population synchrony has been shown to correlate with proxies for movement frequency such as the coverage of suitable habitat types in intervening landscapes, and also least cost distances around hostile land cover types. 3. This provides tentative evidence that synchrony is directly driven by movements of the focal species, but an alternative explanation is that these land cover types affect the movement of interacting species (e.g. natural enemies of the focal species) which can also drive synchronous population dynamics. Therefore, what is needed is a test directly relating population synchrony to movement frequencies of a focal species. 4. Here we use data from a 21 year mark‐release‐recapture study and show that population synchrony does indeed predict movements of a focal butterfly species Boloria eunomia (Esper). 5. There is growing evidence that population synchrony can be a useful conservation tool to measure functional connectivity.     

Genetic diversity in an ant-dispersed chenopod Sclerolaena diacantha

Abstract Sclerolaena diacantha is a common and widespread, short-lived chenopod of arid Australia. The diaspore contains a food mass attractive to ants and, at sites where the ant Rhytidoponera sp B is common, thousands of diaspores accumulate on the nest mounds. Bagged plants set seed, showing that it is self-compatible. Population genetic variation was investigated at two levels: within and between sites, and within and between seed banks accumulated on the ant nests. Electrophoretic analysis of adult plants for 17 loci at 12 sites revealed nine polymorphic loci, but within sites only 6–18% of the loci were polymorphic. The values for mean gene diversity (He = 0.042) and total genetic diversity, (H_T= 0.088) were lower than those recorded for most other plant species. The mean fixation index of 0.52 indicated a mixed mating system with about 70% selfing. Most of the genetic diversity was distributed within sites (Dst = 0.008) and the mean value of 0.094 for GST indicated low levels of genetic differentiation. Electrophoretic analysis of seeds from 12 ant mounds at two sites showed that genetic differentiation was three times greater between seed banks than between the sites. However, collectively the genetic diversity stored within ant mounds was similar to the total diversity within the sites. It appears that restricted ant-dispersal and moderate inbreeding may create a local population structure that is undetected when sampling at a larger scale. Since investigations of genetic patterns on a very local scale are just beginning, there is much to learn about the evolutionary and genetic consequences of different seed flow patterns.