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31.
Jessica. H. Farley Tim L. O. Davis Mark V. Bravington Retno Andamari Campbell R. Davies 《PloS one》2015,10(5)
Knowledge of spawning behaviour and fecundity of fish is important for estimating the reproductive potential of a stock and for constructing appropriate statistical models for assessing sustainable catch levels. Estimates of length-based reproductive parameters are particularly important for determining potential annual fecundity as a function of fish size, but they are often difficult to estimate reliably. Here we provide new information on the reproductive dynamics of southern bluefin tuna (SBT) Thunnus maccoyii through the analysis of fish size and ovary histology collected on the spawning ground in 1993–1995 and 1999–2002. These are used to refine previous parameter estimates of spawning dynamics and investigate size related trends in these parameters. Our results suggest that the small SBT tend to arrive on the spawning ground slightly later and depart earlier in the spawning season relative to large fish. All females were mature and the majority were classed as spawning capable (actively spawning or non-spawning) with a very small proportion classed as regressing. The fraction of females spawning per day decreased with fish size, but once females start a spawning episode, they spawned daily irrespective of size. Mean batch fecundity was estimated directly at 6.5 million oocytes. Analysis of ovary histology and ovary weight data indicated that relative batch fecundity, and the duration of spawning and non-spawning episodes, increased with fish size. These reproductive parameter estimates could be used with estimates of residency time on the spawning ground as a function of fish size (if known) and demographic data for the spawning population to provide a time series of relative annual fecundity for SBT. 相似文献
32.
Sing-Huang Tan Nur Sabrina Sapari Hui Miao Mikael Hartman Marie Loh Wee-Joo Chng Philip Iau Shaik Ahmad Buhari Richie Soong Soo-Chin Lee 《PloS one》2015,10(12)
Background
Changes in tumor DNA mutation status during chemotherapy can provide insights into tumor biology and drug resistance. The purpose of this study is to analyse the presence or absence of mutations in cancer-related genes using baseline breast tumor samples and those obtained after exposure to one cycle of chemotherapy to determine if any differences exist, and to correlate these differences with clinical and pathological features.Methods
Paired breast tumor core biopsies obtained pre- and post-first cycle doxorubicin (n = 18) or docetaxel (n = 22) in treatment-naïve breast cancer patients were analysed for 238 mutations in 19 cancer-related genes by the Sequenom Oncocarta assay.Results
Median age of patients was 48 years (range 32–64); 55% had estrogen receptor-positive tumors, and 60% had tumor reduction ≥25% after cycle 1. Mutations were detected in 10/40 (25%) pre-treatment and 11/40 (28%) post-treatment samples. Four mutation pattern categories were identified based on tumor mutation status pre- → post-treatment: wildtype (WT)→WT, n = 24; mutant (MT)→MT, n = 5; MT→WT, n = 5; WT→MT, n = 6. Overall, the majority of tumors were WT at baseline (30/40, 75%), of which 6/30 (20%) acquired new mutations after chemotherapy. Pre-treatment mutations were predominantly in PIK3CA (8/10, 80%), while post-treatment mutations were distributed in PIK3CA, EGFR, PDGFRA, ABL1 and MET. All 6 WT→MT cases were treated with docetaxel. Higher mutant allele frequency in baseline MT tumors (n = 10; PIK3CA mutations n = 8) correlated with less tumor reduction after cycle 1 chemotherapy (R = -0.667, p = 0.035). No other associations were observed between mutation pattern category with treatment, clinicopathological features, and tumor response or survival.Conclusion
Tumor mutational profiles can change as quickly as after one cycle of chemotherapy in breast cancer. Understanding of these changes can provide insights on potential therapeutic options in residual resistant tumors.Trial Registration
ClinicalTrials.gov NCT00212082相似文献33.
34.
Climate and demography of the planktivorous Cassin's auklet Ptychoramphus aleuticus off northern California: implications for population change 总被引:1,自引:0,他引:1
1. We performed demographic analyses on Cassin's auklet Ptychoramphus aleuticus, a zooplanktivorous seabird inhabiting the variable California Current System, to understand how temporal environmental variability influences population dynamics. 2. We used capture-recapture data from 1986 to 2002 to rank models of interannual variation in survival, breeding propensity, breeding success, and recruitment. 3. All demographic parameters exhibited temporal variability. Interannual variation in survival was best modelled as a nonlinear function of the winter Southern Oscillation Index (SOI). Breeding propensity was best modelled as a threshold function of local sea surface temperature. Breeding success and recruitment were best modelled with year-dependent annual variation. 4. Changes in the SOI force El Ni?o/La Ni?a events, which in turn alter prey availability to seabirds in this system. Demographic responses varied during El Ni?os/La Ni?as. Survival diminished substantially during the 1997-98 El Ni?o event, while breeding propensity was affected during both the 1992 and 1998 El Ni?os. Breeding success was reduced during the 1992, 1993, and 1998 El Ni?os, but was unusually high in 2002. Recruitment was higher at the beginning and end of this time-series. 5. While demographic responses varied interannually, parameter values covaried in a positive fashion, a situation conducive to rapid population change. During the 11 years study period, the Farallon auklet breeding population declined at 6.05 +/- 0.80% (SE) per year, a cumulative decline of 49.7%. This study demonstrates how climate variability has influenced key demographic processes for this diminished marine bird population. 相似文献
35.
Daud NH Kariwa H Tanikawa Y Nakamura I Seto T Miyashita D Yoshii K Nakauchi M Yoshimatsu K Arikawa J Takashima I 《Microbiology and immunology》2007,51(11):1081-1090
Hokkaido virus (HOKV) is a member of the genus Hantavirus, in the family Bunyaviridae. To investigate HOKV infection in the host Myodes rufocanus, the grey red-backed vole, 199 animals were captured at Tobetsu (October 2004 and July 2005) and Nakagawa (October 2004) in Hokkaido, Japan, for detection of antibody, antigen, and viral RNA. In the surveys in Tobetsu (2004) and Nakagawa (2004), seropositive animals were detected at a frequency of 6.0% (5/84) and 10.4% (5/48), respectively. No seropositive animals were detected in Tobetsu in 2005. Seroprevalence in males in Tobetsu and Nakagawa in 2004 was 25% (1/4) and 45.5% (5/11), respectively, which was higher than in females, at 5.0% (4/80) and 0% (0/37), respectively (P<0.01). These results suggest that male animals play an important role in the maintenance of HOKV in M. rufocanus. Two females were seronegative but viral RNA-positive, indicating that these animals had acute infections before antibody was produced. Another five infected animals in Nakagawa were all male and had high levels of antibodies and viral RNA, suggesting that they had persistent infections. Viral RNA copies in organs of infected animals in Nakagawa were quantified by real-time polymerase chain reaction. Two acutely infected animals had > or = 10 times the number of RNA copies in their lungs compared to those of persistently infected animals. In most cases, lungs or spleen had the highest RNA copy number, regardless of infection status. 相似文献
36.
Decelerating growth in tropical forest trees 总被引:1,自引:0,他引:1
The impacts of global change on tropical forests remain poorly understood. We examined changes in tree growth rates over the past two decades for all species occurring in large (50-ha) forest dynamics plots in Panama and Malaysia. Stem growth rates declined significantly at both forests regardless of initial size or organizational level (species, community or stand). Decreasing growth rates were widespread, occurring in 24–71% of species at Barro Colorado Island, Panama (BCI) and in 58–95% of species at Pasoh, Malaysia (depending on the sizes of stems included). Changes in growth were not consistently associated with initial growth rate, adult stature, or wood density. Changes in growth were significantly associated with regional climate changes: at both sites growth was negatively correlated with annual mean daily minimum temperatures, and at BCI growth was positively correlated with annual precipitation and number of rainfree days (a measure of relative insolation). While the underlying cause(s) of decelerating growth is still unresolved, these patterns strongly contradict the hypothesized pantropical increase in tree growth rates caused by carbon fertilization. Decelerating tree growth will have important economic and environmental implications. 相似文献
37.
Zainuddin Zainal Zahari Tarmizi Reza Chee Yap Keng Sarkawi Nur Nabila Ahmad Hafandi Salleh Annas Tahir Nur Diyana Mohamad Baiee Falah Che-Amat Azlan Fitri Wan-Nor 《Primates; journal of primatology》2022,63(4):377-386
Primates - Bornean orangutan is a critically endangered non-human primate; however, the threat of extinction is not merely from poaching and habitat loss. Orangutan survival is also threatened by... 相似文献
38.
Karakaya Songul Göger Gamze Bona Gülnur Ekşi Yuca Hafize Aydın Bilge Tekman Enes Şahin Aydan Acar Pınar Nur Münevver Güvenalp Zühal 《Protoplasma》2022,259(6):1493-1506
Protoplasma - Colchicum speciosum Steven species is a perennial stemless plant. C. speciosum is a flowering herb native to mountainous regions of northern Turkey, the Caucasus, and northern Iran.... 相似文献
39.
Gabby N. Ahmadia Louise Glew Mikaela Provost David Gill Nur Ismu Hidayat Sangeeta Mangubhai Purwanto Helen E. Fox 《Philosophical transactions of the Royal Society of London. Series B, Biological sciences》2015,370(1681)
Quasi-experimental impact evaluation approaches, which enable scholars to disentangle effects of conservation interventions from broader changes in the environment, are gaining momentum in the conservation sector. However, rigorous impact evaluation using statistical matching techniques to estimate the counterfactual have yet to be applied to marine protected areas (MPAs). While there are numerous studies investigating ‘impacts’ of MPAs that have generated considerable insights, results are variable. This variation has been linked to the biophysical and social context in which they are established, as well as attributes of management and governance. To inform decisions about MPA placement, design and implementation, we need to expand our understanding of conditions under which MPAs are likely to lead to positive outcomes by embracing advances in impact evaluation methodologies. Here, we describe the integration of impact evaluation within an MPA network monitoring programme in the Bird''s Head Seascape, Indonesia. Specifically we (i) highlight the challenges of implementation ‘on the ground’ and in marine ecosystems and (ii) describe the transformation of an existing monitoring programme into a design appropriate for impact evaluation. This study offers one potential model for mainstreaming impact evaluation in the conservation sector. 相似文献