A revision of European Copidosoma Ratzeburg (Hymenoptera, Chalcidoidea, Encyrtidae): some corrections and a description of Copidosoma tremblayi sp.nov.

Abstract.  One invalid lectotype designation proposed in a recent revision of European species of Copidosoma is validated ( Encyrtus geniculatus Dalman) and four incorrectly cited designations are corrected ( C. peninsulare Mercet, E. filicornis Dalman, E. flagellaris Dalman, E. machaeras Walker). One species, C. tremblayi , is described as new.     

Sexual devolution in plants: apomixis uncloaked?

There are a growing number of examples where naturally occurring mutations disrupt an established physiological or developmental pathway to yield a new condition that is evolutionary favored. Asexual reproduction by seed in plants, or apomixis, occurs in a diversity of taxa and has evolved from sexual ancestors. One form of apomixis, diplospory, is a multi-step development process that is initiated when meiosis is altered to produce an unreduced rather than a reduced egg cell. Subsequent parthenogenetic development of the unreduced egg yields genetically maternal progeny. While it has long been apparent from cytological data that meiosis in apomicts was malfunctional or completely bypassed, the genetic basis of the phenomenon has been a long-standing mystery. New data from genetic analysis of Arabidopsis mutants in combination with more sophisticated molecular understanding of meiosis in plants indicate that a weak mutation of the gene SWI, called DYAD, interferes with sister chromatid cohesion in meiosis I, causes synapsis to fail in female meiosis and yields two unreduced cells. The new work shows that a low percentage of DYAD ovules produce functional unreduced egg cells (2n) that can be fertilized by haploid pollen (1n) to give rise to triploid (3n) progeny. While the DYAD mutants differ in some aspects from naturally occurring apomicts, the work establishes that mutation to a single gene can effectively initiate apomictic development and, furthermore, focuses efforts to isolate apomixis genes on a narrowed set of developmental events. Profitable manipulation of meiosis and recombination in agronomically important crops may be on the horizon.     

In vivo regulation of human leukocyte 3-hydroxy-3-methylglutaryl coenzyme A reductase: increased enzyme protein concentration and catalytic efficiency in human leukemia and lymphoma.

The activity of microsomal HMG-CoA reductase in freshly isolated leukocytes from patients with a variety of hematologic malignancies was significantly increased (up to 20-fold) when compared to enzyme activity in leukocytes from normal subjects (average 10.3 +/- 0.8 pmol/min per mg). Increased enzyme activity was not due to nonspecific leukocyte stimulation or to the presence of a malignancy, since normal enzyme activity was observed in subjects with either viral illnesses or solid tumors. Increased HMG-CoA reductase activity accompanying hematologic malignancy could also not be attributed to alterations in enzyme-substrate kinetic parameters (Km), or to alterations in the phosphorylation state or thiol-disulfide status of the enzyme, nor was it correlated with differences in serum lipid or lipoprotein concentrations. The increase (3.6-fold) in HMG-CoA reductase activity in leukocytes from patients with preleukemia was due entirely to a rise in enzyme catalytic efficiency (specific activity), whereas the increase (4.3-fold) observed in leukocytes from patients with overt leukemia or non-Hodgkin's lymphoma was due to a concomitant increase in both enzyme catalytic efficiency (2.5-fold) and enzyme protein concentration (1.6-fold). Similar increases in HMG-CoA reductase activity and catalytic efficiency were also noted for both transformed, nonmalignant, and malignant cultured leukocytes, suggesting that increased enzyme catalytic efficiency is not a nonspecific consequence of physiological changes occurring in response to the malignancy but may be an integral aspect of the malignant phenotype. HMG-CoA reductase protein concentrations, however, were not elevated in either transformed, nonmalignant, or malignant cultured leukocytes, suggesting that increases in enzyme protein levels may be secondary to other physiological changes that occur during the development of overt leukemia. Taken together, these observations suggest that an increase in the activity of HMG-CoA reductase, the rate-controlling enzyme in cholesterol synthesis, is a common occurrence in human hematologic malignancies and that a biphasic elevation of enzyme activity may exist in malignant leukocytes, such that changes in catalytic activity may occur early in tumorigenesis and may be followed by secondary changes in enzyme levels.     

Roles of maternal condition and predation in survival of juvenile Elk in Oregon

Abundant evidence supports the benefits accrued to the Florida panther (Puma concolor coryi) population via the genetic introgression project implemented in South Florida, USA, in 1995. Since then, genetic diversity has improved, the frequency of morphological and biomedical correlates of inbreeding depression have declined, and the population size has increased. Nevertheless, the panther population remains small and isolated and faces substantial challenges due to deterministic and stochastic forces. Our goals were 1) to comprehensively assess the demographics of the Florida panther population using long-term (1981–2015) field data and modeling to gauge the persistence of benefits accrued via genetic introgression and 2) to evaluate the effectiveness of various potential genetic management strategies. Translocation and introduction of female pumas (Puma concolor stanleyana) from Texas, USA, substantially improved genetic diversity. The average individual heterozygosity of canonical (non-introgressed) panthers was 0.386 ± 0.012 (SE); for admixed panthers, it was 0.615 ± 0.007. Survival rates were strongly age-dependent (kittens had the lowest survival rates), were positively affected by individual heterozygosity, and decreased with increasing population abundance. Overall annual kitten survival was 0.32 ± 0.09; sex did not have a clear effect on kitten survival. Annual survival of subadult and adult panthers differed by sex; regardless of age, females exhibited higher survival than males. Annual survival rates of subadult, prime adult, and old adult females were 0.97 ± 0.02, 0.86 ± 0.03, and 0.78 ± 0.09, respectively. Survival rates of subadult, prime adult, and old adult males were 0.66 ± 0.06, 0.77 ± 0.05, and 0.65 ± 0.10, respectively. For panthers of all ages, genetic ancestry strongly affected survival rate, where first filial generation (F1) admixed panthers of all ages exhibited the highest rates and canonical (mostly pre-introgression panthers and their post-introgression descendants) individuals exhibited the lowest rates. The most frequently observed causes of death of radio-collared panthers were intraspecific aggression and vehicle collision. Cause-specific mortality analyses revealed that mortality rates from vehicle collision, intraspecific aggression, other causes, and unknown causes were generally similar for males and females, although males were more likely to die from intraspecific aggression than females. The probability of reproduction and the annual number of kittens produced varied by age; evidence that ancestry or abundance influenced these parameters was weak. Predicted annual probabilities of reproduction were 0.35 ± 0.08, 0.50 ± 0.05, and 0.25 ± 0.06 for subadult, prime adult, and old adult females, respectively. The number of kittens predicted to be produced annually by subadult, prime adult, and old adult females were 2.80 ± 0.75, 2.67 ± 0.43, and 2.28 ± 0.83, respectively. The stochastic annual population growth rate estimated using a matrix population model was 1.04 (95% CI = 0.72–1.41). An individual-based population model predicted that the probability that the population would fall below 10 panthers within 100 years (quasi-extinction) was 1.4% (0–0.8%) if the adverse effects of genetic erosion were ignored. However, when the effect of genetic erosion was considered, the probability of quasi-extinction within 100 years increased to 17% (0–100%). Mean times to quasi-extinction, conditioned on going quasi-extinct within 100 years, was 22 (0–75) years when the effect of genetic erosion was considered. Sensitivity analyses revealed that the probability of quasi-extinction and expected time until quasi-extinction were most sensitive to changes in kitten survival parameters. Without genetic management intervention, the Florida panther population would face a substantially increased risk of quasi-extinction. The question, therefore, is not whether genetic management of the Florida panther population is needed but when and how it should be implemented. Thus, we evaluated genetic and population consequences of alternative genetic introgression strategies to identify optimal management actions using individual-based simulation models. Releasing 5 pumas every 20 years would cost much less ($200,000 over 100 years) than releasing 15 pumas every 10 years ($1,200,000 over 100 years) yet would reduce the risk of quasi-extinction by comparable amount (44–59% vs. 40–58%). Generally, releasing more females per introgression attempt provided little added benefit. The positive effects of the genetic introgression project persist in the panther population after 20 years. We suggest that managers contemplate repeating genetic introgression by releasing 5–10 individuals from other puma populations every 20–40 years. We also recommend that managers continue to collect data that will permit estimation and monitoring of kitten, adult, and subadult survival. We identified these parameters via sensitivity analyses as most critical in terms of their impact on the probability of and expected times to quasi-extinction. The continuation of long-term monitoring should permit the adaptation of genetic management strategies as necessary while collecting data that have proved essential in assessing the genetic and demographic health of the population. The prospects for recovery of the panther will certainly be improved by following these guidelines. © 2019 The Authors. Wildlife Monographs published by Wiley Periodicals, Inc. on behalf of The Wildlife Society.     

An integrated pipeline for the development of novel panels of mapped microsatellite markers for Leishmania donovani complex, Leishmania braziliensis and Leishmania major

A panel of microsatellites mapped to the Leishmania genome might make it possible to find associations between specific loci and phenotypic traits. To identify such loci, a Perl programme was written that scans the sequence of a genome and writes all loci containing microsatellites to a MySQL database. The programme was applied to the sequences of the L. braziliensis, L. infantum and L. major genomes. The database is publicly available over the internet: http://www.genomics.liv.ac.uk/tryps/resources.html 'Microsatellite Locus Extractor', and allows the selection of mapped microsatellites that meet user-defined criteria from a specified region of the selected genome. The website also incorporates a primer design pipeline that will design primers to amplify the selected loci. Using this pipeline 12 out of 17 primer sets designed against the L. infantum genome generated polymorphic PCR products. A tailed primer protocol was used to label all microsatellite primers with a single set of labelled primers. To avoid the culture of parasites prior to genotyping, sets of nested PCR primers were developed to amplify parasite DNA eluted from microscope slides. The limit of detection was approximately 1.6 parasite equivalents. However, only 6/56 DNA from slides stored at ambient temperature for over 6 months gave positive PCR results.     

Structural and functional characteristics of activated human factor IX after chemical modification of gamma-carboxyglutamic acid residues

Activated human factor IX (factor IXa) was treated under mildly acidic conditions with a mixture of formaldehyde and morpholine. This reagent has been shown to react preferentially with gamma-carboxyglutamyl (Gla) residues and to convert these residues to gamma-methyleneglutamyl residues (Wright, S.F., Bourne, C.D., Hoke, R.A., Koehler, K.A., and Hiskey, R.G. (1984) Anal. Biochem. 139, 82-90). The modified enzyme was evaluated for coagulant activity and calcium-dependent fluorescence quenching. [14C]Formaldehyde was employed to allow quantitation of the modification and to facilitate localization of the modified residues in the primary structure of factor IXa. In the presence of the [14C]formaldehyde/morpholine reagent, factor IXa rapidly lost coagulant activity, which corresponded to incorporation of radiolabel. Examination of the relationship between protein modification (radiolabel incorporation) and the loss of coagulant activity suggested that modification of 1 mol of Gla/mol of factor IXa results in complete loss of factor IXa coagulant activity. Primary structure analysis of the radioactivity labeled factor IXa suggested that modification of any one of 11 Gla residues was responsible for the loss of coagulant activity. In the presence of calcium, modified factor IXa exhibited a smaller Gla-dependent decrease in protein fluorescence than native factor IXa, but the Gla-independent fluorescence change was the same for both proteins. It therefore appears that the Gla domain of factor IXa must be completely intact for the enzyme to undergo a functionally important calcium-dependent conformational change necessary for coagulant activity.     

In and out of Madagascar: Dispersal to Peripheral Islands, Insular Speciation and Diversification of Indian Ocean Daisy Trees (Psiadia, Asteraceae)

Madagascar is surrounded by archipelagos varying widely in origin, age and structure. Although small and geologically young, these archipelagos have accumulated disproportionate numbers of unique lineages in comparison to Madagascar, highlighting the role of waif-dispersal and rapid in situ diversification processes in generating endemic biodiversity. We reconstruct the evolutionary and biogeographical history of the genus Psiadia (Asteraceae), a plant genus with near equal numbers of species in Madagascar and surrounding islands. Analyzing patterns and processes of diversification, we explain species accumulation on peripheral islands and aim to offer new insights on the origin and potential causes for diversification in the Madagascar and Indian Ocean Islands biodiversity hotspot. Our results provide support for an African origin of the group, with strong support for non-monophyly. Colonization of the Mascarenes took place by two evolutionary distinct lineages from Madagascar, via two independent dispersal events, each unique for their spatial and temporal properties. Significant shifts in diversification rate followed regional expansion, resulting in co-occurring and phenotypically convergent species on high-elevation volcanic slopes. Like other endemic island lineages, Psiadia have been highly successful in dispersing to and radiating on isolated oceanic islands, typified by high habitat diversity and dynamic ecosystems fuelled by continued geological activity. Results stress the important biogeographical role for Rodrigues in serving as an outlying stepping stone from which regional colonization took place. We discuss how isolated volcanic islands contribute to regional diversity by generating substantial numbers of endemic species on short temporal scales. Factors pertaining to the mode and tempo of archipelago formation and its geographical isolation strongly govern evolutionary pathways available for species diversification, and the potential for successful diversification of dispersed lineages, therefore, appears highly dependent on the timing of arrival, as habitat and resource properties change dramatically over the course of oceanic island evolution.