The involvement of an endogenous circadian rhythm in photoperiodic timing in Acrochaetium asparagopsis (Rhodophyta,Acrochaetiales)

In Acrochaetium asparagopsis (Chemin) Papenfuss, tetrasporocyst formation is a genuine short-day photoperiodic response. Experiments in bi-diurnal and tri-diurnal cycles have shown that maximum inhibition of the response occurred with night-breaks given at approximately 24 h intervals and coincided with the postulated skotophile phase, while maximum stimulation was due to night-breaks in the postulated photophile phase. In cycle length experiments the fertility was stimulated in cycle lengths of 24 and 44 h and it was inhibited in cycle lengths of 36–40 and 52 h (or more). In addition the response was inhibited by light periods longer than 14 h, however long the associated dark period. Dark periods of various durations were completely ineffective in initiating tetrasporocysts and an induction phase of 5–7 short-days (8:) was necessary for the fertility. The lighting treatment following the induction phase was found to have no significant effect on the fertility and tetrasporocysts were obtained in continuous light or darkness. In resetting experiments, three more reversed short-day cycles (11 cycles, :8, photoperiod started at 24.00) were required to obtain the same maximum fertility (100%) observed under normal short-day cycles (9 cycles, 8:16, photoperiod started at 08.00). The induction, however, was completely lost with 96 h of continuous light (20 µE m^-2s^-1) and even 14 reversed short-day cycles were ineffective in initiating a new rhythmic mechanism.     

Morphological description and phylogenetic assessment of 28S rRNA for Thelandros chalcidiae sp. nov. from Chalcides ocellatus

Molecular Biology Reports - Thelandros is a genus of oxyurid nematodes which parasitize both omnivorous and herbivorous hosts. Thelandros chalcidiae sp. nov. is a new taxa described from the large...     

Natural infestation of <Emphasis Type="Italic">Pimeliaphilus joshuae</Emphasis> on scorpion species from Egypt

The main goal of this study was to study the acarine parasite, Pimeliaphilus joshuae (Prostigmata: Pterygosomatidae) on various scorpion species from Egypt to determine its prevalence, abundance and intensity in relation to host species, size and sex. A total of 95 Leiurus quinquestriatus, 98 Androctonus australis, 40 A. amoreuxi, 30 Scorpio maurus palmatus and 46 Orthochirus scrobicuosus were examined during August 2009. Prevalence and mean abundance of P. joshuae varied significantly in relation to host species, host size and sex. In L. quinquestriatus, A. australis, and A. amoreuxi, the prevalence was 76.8, 13.3, and 50.0%, whereas the mean abundance was 47.6, 6.7 and 14.3%, respectively. Prevalence and mean abundance of P. joshuae were both positively correlated with host size in L. quinquestriatus and A. australis. We conclude that P. joshuae is found in a wide range of scorpion species exhibiting a low degree of host specificity. Controlled laboratory infection experiments are required to explain why S. m. palmatus and O. scrobicuosus are not susceptible to infestation by P. joshuae.     

Protective effect of ellagic acid and pumpkin seed oil against methotrexate-induced small intestine damage in rats

Gastrointestinal toxicity is one of the most serious side effects in the methotrexate (MTX) treatment. This study was designed to investigate whether ellagic acid (EA) and/or pumpkin seed oil (PSO) had a protective effect on MTX-induced small intestine damage. Forty albino rats were randomized into five groups of 8 rats each. Group I served as a normal control group. In Group II, MTX was administered as a single dose (20 mg/kg) intraperitoneally. Groups III, IV and V were pre-treated respectively with either PSO (40 mg/kg), EA (10 mg/kg) or 0.2% DMSO (vehicle control) orally every day by gavage for 5 days and then they received MTX. All animals were sacrificed 5 days after the intraperitoneal injection of MTX for histopathological examination, estimation of serum prostaglandin E2 (PGE2) level, assay of tissue malondialdehyde (MDA), reduced glutathione (GSH) and nitric oxide (NO) levels and myloperoxidase (MPO), xanthine oxidase (XO) and adenosine deaminase (AD) activities. Administration of EA and/or PSO decreased the intestinal damage, PGE2, MDA and NO levels and MPO, XO and AD activities and increased GSH level. These results suggest that EA and PSO protect the small intestine of rats from MTX-induced damage through their antioxidant and anti-inflammatory effects and thus have potential as a promising drug in the prevention of undesired side effects of MTX.     

Repellent and insecticidal activities of Melia azedarach L. against cotton leafworm, Spodoptera littoralis (Boisd.)

A crude acetone extract and oil of ripe fruits from Melia azedarach L. were evaluated against the 2nd and 4th instar larvae of Spodoptera littoralis (Boisd.) (Lepidoptera: Noctuidae). Both oil and extract exhibited highly significant growth inhibition at all concentrations tested, while the oil of M. azedarach recorded higher insecticidal activity against both instars than the crude extract. GC-MS analysis of the oil revealed the presence of linoleic acid methyl ester, oleic acid methyl ester, and free oleic acid as the main components in addition to hexadecanol, palmitic acid, methyl esters of stearic acid and myristic acid. Fatty acids and their esters were not only the main constituents of essential oil from the ripe fruits of M. azedarach, but also mainly responsible for the insecticidal and growth inhibition activity against S. littoralis.     

Complete genome sequence of the anaerobic, halophilic alkalithermophile Natranaerobius thermophilus JW/NM-WN-LF

The genome of the anaerobic halophilic alkalithermophile Natranaerobius thermophilus consists of one 3,165,557-bp chromosome and two plasmids (17,207 bp and 8,689 bp). The present study is the first to report the completely sequenced genome of an anaerobic polyextremophile and genes associated with roles in regulation of intracellular osmotic pressure, pH homeostasis, and growth at elevated temperatures.     

Algorithmic Global Criteria for Excluding Oscillations

We investigate algorithmic methods to tackle the following problem: Given a system of parametric ordinary differential equations built by a biological model, does there exist ranges of values for the model parameters and variables which are both meaningful from a biological point of view and where oscillating trajectories, can be found? We show that in the common case of polynomial vector fields known criteria excluding the existence of non-constant limit cycles lead to quantifier elimination problems over the reals.We apply these criteria to various models that have been previously investigated in the context of algebraic biology.     

Pharmacophore-based discovery of FXR agonists. Part I: Model development and experimental validation

The farnesoid X receptor (FXR) is involved in glucose and lipid metabolism regulation, which makes it an attractive target for the metabolic syndrome, dyslipidemia, atherosclerosis, and type 2 diabetes. In order to find novel FXR agonists, a structure-based pharmacophore model collection was developed and theoretically evaluated against virtual databases including the ChEMBL database. The most suitable models were used to screen the National Cancer Institute (NCI) database. Biological evaluation of virtual hits led to the discovery of a novel FXR agonist with a piperazine scaffold (compound 19) that shows comparable activity as the endogenous FXR agonist chenodeoxycholic acid (CDCA, compound 2).     

Cyanidin-3-Glucoside Modulates hsa_circ_0001345/miRNA106b/ATG16L1 Axis Expression as a Potential Protective Mechanism against Hepatocellular Carcinoma

Hepatocellular carcinoma (HCC) is the most common form of malignancy in the liver. Autophagy was found to have a significant effect in controlling HCC. Anthocyanins, which are naturally occurring pigments in a variety of fruits and vegetables, have been thoroughly documented to be involved in a variety of bioactive activities and are widely employed for their antioxidant capabilities. Cyanidin-3-glucoside (C3G) extracted from Morus alba L. has promising antioxidant and anti-tumour activities. The current study aims to examine the protective action of C3G against hepatocellular carcinoma through the investigation of the autophagy protein ATG16L1 expression along with its related RNA molecules (hsa_circ_0001345 and miRNA106b) in Wistar rats. In vivo precancerous lesions (PCL) were induced using diethylnitrosamine (DEN) and acetamidofluorene (2-AAF). Rats were treated with C3G (10, 15, and 20 mg/kg; 4 times weekly) for 112 days (16 weeks). Liver function tests, alfa fetoprotein, ATG16L1 expression, hsa_circ_0001345, and miRNA106b differential expression were examined. Liver sections were examined by histological and immunohistochemical approaches. The current study’s findings indicated that C3G administration protects against the negative effects of DEN-2-AAF on liver functions and liver histopathological sections, which nominated C3G as a potential prophylactic agent against HCC.     

Phylogenetic and metabolic diversity of Planctomycetes from anaerobic, sulfide- and sulfur-rich Zodletone Spring, Oklahoma

We investigated the phylogenetic diversity and metabolic capabilities of members of the phylum Planctomycetes in the anaerobic, sulfide-saturated sediments of a mesophilic spring (Zodletone Spring) in southwestern Oklahoma. Culture-independent analyses of 16S rRNA gene sequences generated using Planctomycetes-biased primer pairs suggested that an extremely diverse community of Planctomycetes is present at the spring. Although sequences that are phylogenetically affiliated with cultured heterotrophic Planctomycetes were identified, the majority of the sequences belonged to several globally distributed, as-yet-uncultured Planctomycetes lineages. Using complex organic media (aqueous extracts of the spring sediments and rumen fluid), we isolated two novel strains that belonged to the Pirellula-Rhodopirellula-Blastopirellula clade within the Planctomycetes. The two strains had identical 16S rRNA gene sequences, and their closest relatives were isolates from Kiel Fjord (Germany), Keauhou Beach (HI), a marine aquarium, and tissues of marine organisms (Aplysina sp. sponges and postlarvae of the giant tiger prawn Penaeus monodon). The closest recognized cultured relative of strain Zi62 was Blastopirellula marina (93.9% sequence similarity). Detailed characterization of strain Zi62 revealed its ability to reduce elemental sulfur to sulfide under anaerobic conditions, as well as its ability to produce acids from sugars; both characteristics may potentially allow strain Zi62 to survive and grow in the anaerobic, sulfide- and sulfur-rich environment at the spring source. Overall, this work indicates that anaerobic metabolic abilities are widely distributed among all major Planctomycetes lineages and suggests carbohydrate fermentation and sulfur reduction as possible mechanisms employed by heterotrophic Planctomycetes for growth and survival under anaerobic conditions.