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11.
We have analyzed a total of 12 different global and local multiple
protein-sequence alignment methods. The purpose of this study is to
evaluate each method's ability to correctly identify the ordered series of
motifs found among all members of a given protein family. Four
phylogenetically distributed sets of sequences from the hemoglobin, kinase,
aspartic acid protease, and ribonuclease H protein families were used to
test the methods. The performance of all 12 methods was affected by (1) the
number of sequences in the test sets, (2) the degree of similarity among
the sequences, and (3) the number of indels required to produce a multiple
alignment. Global methods generally performed better than local methods in
the detection of motif patterns.
相似文献
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内皮素对失血性休克鼠脑微循环的影响及尼莫地平、川芎嗪的治疗作用 总被引:1,自引:1,他引:0
利用大鼠颅骨开窗观察软脑膜微循环的方法研究了内皮素(ET-1)10-10-10-7mol/L对软脑膜微循环的影响以及失血性休克时软脑膜对ET-1的反应性。并用10-7mol/L造成失血性休克后脑血管痉挛的模型,观察尼莫地平、川芎嗪、654-2对内皮素引起血管痉挛的治疗作用。10-9、10-8和10-7mol/L3种浓度ET-1可使软脑膜小动脉、细动脉强烈收缩,收缩率分别为27.7%、46.8%、78.5%,其收缩强度与ET-1的浓度有关。对静脉的作用不明显。10-10mol/LET-1可使细动脉轻度扩张。出血性休克时,软脑膜血流明显减慢,小动脉、细动脉管径对ET-1的收缩作用更敏感,脑组织血流明显减少。尼莫地平具有较好的拮抗ET-1引起软脑膜动脉的收缩和改善局部微循环的作用。川芎嗪也能拮抗ET-1引起软脑膜动脉的收缩,但作用较尼莫地平弱。654-2不能缓解ET-1对软脑膜动脉的收缩作用。 相似文献
14.
慢性缺氧对大鼠膈肌组织化学和超微结构影响的研究 总被引:6,自引:0,他引:6
研究慢性缺氧和参麦注射液治疗对大鼠膈肌组织化学和超微结构的影响,结果显示:缺氧使膈肌SDH活性降低,Ⅰ类纤维极显著减少,运动终板ChE活性极显著降低,线粒体肿胀变性,神经肌肉运动终板突触前部囊泡减少,突触间隙模糊,终板模电子密度降低;参麦治疗可恢复缺氧膈肌的SDH活性及Ⅰ类纤维数目,显著提高终板ChE活性,线粒体结构恢复正常,运动终板突触前部囊泡丰富,突触间隙清晰,终板膜电子密度正常。表明慢性缺氧降低膈肌有氧氧化能力,影响其能量代谢及神经冲动的传递,从而减弱其收缩力,而参安治疗可改善缺氧造成的上述损害,为其临床应用提供了实验医学依据。 相似文献
15.
Pengfei Zhang Yuqin Zhang Qifeng Zhao Tiequan Niu Pengfei Wen Jinjun Liang 《Phyton》2023,92(4):1125-1138
Grape pistil has an important influence on fruit size and quality. However, there were few studies on grape ovary, and the development process of the ovary is still unclear. Therefore, in this paper, four different grape varieties with different lengths of small inflorescences, namely ‘Musct Hambourg’ grape (Vitis vinifera), ‘Concord’ grape (Vitis labrusca), ‘ShanPuTao’ grape (Vitis amurensis) and ‘GongNiang2Hao’ grape (Vitis amurensis × Vitis vinifera) were used as test materials. Four varieties ovary were significant differences by means of stereomicroscope, paraffin section. The expression of ovary determining gene VvAGAMOUS (VvAG) and its development related genes VvCRABS CLAW (VvCRC) andVvAGAMOUS-LIKE 11 (VvAGL11) with similar functions during the development of different grape varieties were preliminarily explored using fluorescence quantitative test. The relationship between VvAG and VvCRC, VvAG and VvAGL11 were analyzed using Y1H assay. Our results showed that there were obvious abdominal sutures on the surface of expect for ‘Musct Hambourg’ grape, and existing poly carpels. The ovary development of ‘ShanPuTao’ and ‘GongNiang2Hao’ grape was completed when the inflorescence length was less than 1 cm, while the ‘Concord’ and ‘Musct Hambourg’ grape were fully developed when the length of inflorescence was 3–4 and 4–5 cm, respectively. VvAG and VvCRC began to express in large quantities after the formation of stamen primordia, while VvAGL11 during the forming of ovule primordia. Therefore, VvAG and VvCRC mainly regulated the development of stamens and carpels and also promote the development of ovules, while VvAGL11 major regulated the development of ovules. The promoters of VvCRC and VvAGL11 were bound by VvAG. This study provides an important theoretical basis for further research on the molecular mechanism of grape ovary development. 相似文献
16.
Niu Yuan Wang Fang Liu Le Zhang Guoliang Qi Bo Liu Xinhai Zhao Hongliang Huang Zhiwei Fan Song Zhang Linqing 《Journal of Plant Growth Regulation》2023,42(1):154-167
Journal of Plant Growth Regulation - 1,2,4-trichlorobenzene (1,2,4-TCB) pollution in fields has become a potential threat to rice growth, yet little is known about the different response of many... 相似文献
17.
脏器微血管对荧光素钠通透性的实验方法 总被引:4,自引:1,他引:3
大鼠颈动脉注射1%FlNa,荧光显微镜下活体观察肠系膜微血管血流状态及FlNa的渗出情况,并在不同时间点经股动脉采血,测定血浆内FlNa浓度随时间的变化,利用组织匀浆测定不同脏器中FlNa的分布,再辅以冰冻切片进行观察。活体观察发现,FlNa注入体内后,经微血管迅速向周围组织渗出,最后汇集于淋巴管,血浆及组织匀浆FlNa浓度的测定表明,FlNa浓度随时间的变化呈指数衰减,各脏器FlNa的分布极不相同。冰冻切片也显示了同样的分布差别。这些结果表明,我们所建立的方法可直观、定量地反映FlNa在微血管的通透情况。 相似文献
18.
19.
球形芽孢杆菌Ts—1毒蛋白的分离纯化 总被引:3,自引:2,他引:1
Bacillus sphaericus strain Ts-1 is highly insecticidal to larvae of the mosquito. It's insecticidal component is toxic proteins. The toxin was extracted from spore-crystal complexes by disruption in a Sonicator Cell Disruptor Model W-220F followed by treatment with 0.05 mol/L NaOH. Fraction recovered from chromatography of the spore-crystal complexes on column of Sephadex G-200 were assayed against mosquito larvae and the toxic fractions from gel chromatography were subjected to SDS-PAGE. The toxic proteins in B. sphaericus Ts-1 spore-crystal complex migrated in position corresponding to 42kD and 43kD. Bioassay of the two purified proteins prepared by PAGE indicated that they were all toxic to mosquito larvae. Toxic protein was further purified by DEAE-cellulose chromatography. The toxic protein with a molecular weight of 42kD was obtained. 相似文献
20.
【目的】从长期堆放泰乐菌素药渣附近的土壤中分离出泰乐菌素降解菌,并考察其对泰乐菌素的降解特性。【方法】采用梯度驯化、划线分离法筛选出泰乐菌素优势降解菌,通过形态观察、生理生化特征和16S rRNA基因序列分析方法对其进行系统发育分析及菌种鉴定,并考察菌株对泰乐菌素的降解特性。【结果】从长期堆放泰乐菌素药渣的土壤中分离得到1株泰乐菌素高效降解菌,命名为TS1,其为革兰氏阴性杆菌,菌落形态呈圆形,乳白色,表面光滑,不透明,边缘整齐,鉴定为越南伯克霍尔德氏菌(Burkholderia vietnamiensis)。该菌株在温度35°C、pH 7.0的条件下培养72 h,对初始浓度为300 mg/L泰乐菌素的降解率可达99%以上。【结论】说明菌株TS1对泰乐菌素具有良好的降解特性,可用于生物修复被泰乐菌素废渣废水污染的生态环境。 相似文献