Zooplankton of the northern Benguela region in a quiescent upwelling period

The general features of the horizontal and vertical distributionof the main zooplankton groups in the northern Benguela upwellingregion during a period of abated upwelling in April 1986 arediscussed. Three different types of water were detected: (i)an inshore strip of recently upwelled water; (ii) oceanic waterover the slope; and (iii) Angola Current water penetrating fromthe north. Abundance of the most representative zooplanktongroups, as well as of the total volume of zooplankton, was highestin the shelf region, particularly south of Walvis Bay. Zooplanktonwas most abundant in areas where phytoplankton concentrationswere high and offshore transport was low. There were significantdifferences between the abundance levels of copepods, euphausiids,chaetognaths, and fish eggs and larvae in the different layersof the water column sampled, with the highest concentrationsin the surface layers. The sharpest vertical gradients wereobserved at stations affected by Angolan water, where the thermoclinewas very strong. In contrast, inshore, where stratificationwas low, no such vertical gradients existed.     

Mapping of a major locus that determines telomere length in humans

Telomere length is a crucial factor for both normal chromosomal function and senescence. Mean telomere length in humans shows considerable interindividual variation and strong genetic determination. To see if a locus (or loci) affecting telomere length in humans could be mapped, we performed a quantitative-trait linkage analysis of mean leukocyte telomere-restriction-fragment (TRF) lengths, measured by Southern blotting, in 383 adult subjects comprising 258 sib pairs. Heritability of mean (+/-SE) TRF was 81.9%+/-11.8%. There was significant linkage (LOD score 3.20) of mean TRF length to a locus on chromosome 12, which explained 49% of the overall variability in mean TRF length. We present preliminary analysis of a strong candidate gene in the region, the DNA helicase DDX11. In conclusion, we report mapping of the first locus that determines mean telomere length in humans. Identification of the gene involved and elucidation of its mechanism of action could have important implications for our understanding of chromosomal assembly, telomere biology, and susceptibility to age-related diseases.     

Exon repetition: a major pathway for processing mRNA of some genes is allele-specific

Exon repetition describes the presence of tandemly repeated exons in mRNA in the absence of duplications in the genome. Its existence challenges our understanding of gene expression, because the linear organization of sequences in apparently normal genes must be subverted during RNA synthesis or processing. It is restricted to a small number of genes in some of which over half of the mRNA contains specific patterns of repetition. Although it is sometimes assumed to arise by trans-splicing, there is no evidence of this and the efficiency is very much higher than for examples of bona fide trans-splicing in mammals. Furthermore, a potentially ubiquitous reaction such as trans-splicing is not consistent with a phenomenon that involves such a high proportion of the products of so few genes. Instead, it seems more probable that exon repetition is caused by a specific trans-acting factor. We have tested this and demonstrate for the two best characterized examples that the property is restricted to specific alleles of the affected genes and is determined in cis. It is not determined by exonic splicing signals, as had been suggested previously. In heterozygotes, RNA transcribed from the two alleles of an affected gene can have fundamentally different fates.     

Diel feeding periodicity, daily ration and vertical migration of juvenile Cape hake off the west coast of South Africa

Feeding periodicity, daily ration and vertical migration of juvenile Cape hake Merluccius capensis are investigated from midwater and bottom trawl collections taken during a 42-h period between 29 February and 2 March 1992 at a fixed position off the west coast of South Africa. Feeding of 10-20 cm hake intensified during the night when they ascended into subsurface layers to prey on recruits of anchovy Engraulis capensis. Larger hake remained close to the bottom, were partially cannibalistic and exhibited no diel feeding periodicity. M. capensis appear to migrate vertically and feed asynchronously in midwater, as individuals, and not as a population, returning to the bottom when satiated. Based upon the exponential rate of decline in stomach fullness throughout the day, the evacuation rate by hake <20 cm was estimated as 0.054 h⁻¹; 90% evacuation of anchovy prey required an estimated 43 h. Using the Elliott & Persson and Eggers methods, the daily ration was estimated as 5.51 and 4.15% of wet body weight respectively. The effect of the foraging behaviour of M. capensis on the appropriateness of acoustic sampling for estimates of their abundance is discussed.     

Numerical Simulation of Extinction Spectra of Plasmonically Coupled Nanospheres Using Discrete Dipole Approximation: Influence of Compositional Asymmetry

We demonstrate plasmon coupling phenomenon between equivalent (homodimer) and non-equivalent (heterodimer) spherical shape noble metal nanoparticle (Ag, Au and Al). A systematic comparison of surface plasmon resonance (SPR) and extinction properties of various configurations (monomer, homodimer and heterodimer) has been investigated to observe the effect of compositional asymmetry. Numerical simulation has been done by using discrete dipole approximation method to study the optical properties of plasmonically coupled metal nanoparticles (MNPs). Plasmon coupling between similar nanoparticles allows only higher wavelength bonding plasmon mode while both the plasmon modes lower wavelength antibonding mode as well as higher wavelength bonding mode in the case of heterodimer. Au monomer of radius 50 nm shows resonance peak at 518 nm while plasmon coupling between Au-Au homodimer results in a spectral red shift around 609 nm. Au-Ag plasmonic heterodimer (radius 50 nm) reveals two resonant modes corresponding to higher energy antibonding mode (422 nm) as well as lower energy bonding mode (533 nm). Further, we have shown that interparticle edge-to-edge separation is the most significant parameter affecting the surface plasmon resonances of MNPs. As the inter particle separation decreases, resonance wavelength shows red spectral shift which is maximum for the touching condition. It is shown that plasmon coupling is a reliable strategy to tune the SPR.

     

Enhancement in xylose utilization using <Emphasis Type="Italic">Kluyveromyces marxianus</Emphasis> NIRE-K1 through evolutionary adaptation approach

The evolutionary adaptation was carried out on the thermotolerant yeast Kluyveromyces marxianus NIRE-K1 at 45 °C up to 60 batches to enhance its xylose utilization capability. The adapted strain showed higher specific growth rate and 3-fold xylose uptake rate and short lag phase as compared to the native strain. During aerobic growth adapted yeast showed 2.81-fold higher xylose utilization than that of native. In anaerobic batch fermentation, adapted yeast utilized about 91 % of xylose in 72 h and produced 2.88 and 18.75 g l^?1 of ethanol and xylitol, respectively, which were 5.11 and 5.71-fold higher than that of native. Ethanol yield, xylitol yield and specific sugar consumption rate obtained by the adapted cells were found to be 1.57, 1.65 and 4.84-fold higher than that of native yeast, respectively. Aforesaid results suggested that the evolutionary adaptation will be a very effective strategy in the near future for economic lignocellulosic ethanol production.