A simple method to vary soil heterogeneity in three dimensions in experimental mesocosms

Soil heterogeneity affects terrestrial plant communities both directly and indirectly. In nature, the exploration of the role of heterogeneity is made difficult because any co-varying factors (nutrients, soil depth, etc.) render it problematic to clearly link cause and effect. Attributing changes specifically to heterogeneity is facilitated if heterogeneity is varied in a controlled manner and other possible confounding factors are kept constant. The experiments conducted in such a way have up till now only considered heterogeneity in two dimensions, horizontally or vertically. In this methodological study, we present a novel technique that enables researchers to vary both qualitative and configurational heterogeneity in three dimensions by building up the soil cell by cell in experimental mesocosms. We illustrate the technique with an experiment where we test the effect of cell size (i.e. configurational heterogeneity) on the performance of grassland species that vary in nutrient preference (high N and low N species). Cell size did not affect aboveground biomass but modified species richness, both at the mesocosm and the patch scale, with most species being found when cells were small yet distinct (cell size 12 cm). High N species had significantly greater aboveground biomass and species richness than low N species, both on nutrient rich and nutrient poor cells. Remarkably, those differences disappeared when plants grew on the mesocosms with cell size close to zero. By allowing greater complexity in the design of experimental mesocosms, the 3-D approach can improve understanding of the interplay between soil heterogeneity and plant and ecosystem functioning.     

Establishment of Epiphytic Bromeliads in Successional Tropical Premontane Forests in Costa Rica

Plant community composition is the combined result of species-specific competitive abilities and the availability of propagules. For epiphytic plants, current hypotheses consider that dispersal-related factors are most important. By controlling seed dispersal constraints, we experimentally examined whether the community composition of epiphytic bromeliads in a tropical premontane area is determined during early phases of seedling recruitment. Also, we tested whether establishment success was related to eco-physiological traits of the species. A total of 7200 seeds were artificially affixed on several host trees in two secondary forest patches and in a mature forest stand. Four bromeliad species with differing physiological characteristics (CAM, C₃-CAM, and C₃) and habitat preference (secondary vs. primary forest) were selected. We found that differences in seed germination probability among habitats and species were not likely to influence community assembly. After 2 yr, seedling survival and plant development were relatively higher in the early-successional forest. Seedling establishment success was not associated with specific physiological and morphological adaptations or habitat preference of the studied species. Our results were not consistent with the described community composition and rates of population recruitment of the studied species in the same successional habitats. The results support the hypothesis that chance and historic events related to seed dispersal have an important influence on community assembly of epiphytic plants. In addition, differences in growth rates and reproductive turnover among species are expected to influence the relative abundance and recruitment rates in a particular habitat.     

Soil microbial moisture dependences and responses to drying–rewetting: The legacy of 18 years drought

Climate change will alter precipitation patterns with consequences for soil C cycling. An understanding of how fluctuating soil moisture affects microbial processes is therefore critical to predict responses to future global change. We investigated how long‐term experimental field drought influences microbial tolerance to lower moisture levels (“resistance”) and ability to recover when rewetted after drought (“resilience”), using soils from a heathland which had been subjected to experimental precipitation reduction during the summer for 18 years. We tested whether drought could induce increased resistance, resilience, and changes in the balance between respiration and bacterial growth during perturbation events, by following a two‐tiered approach. We first evaluated the effects of the long‐term summer drought on microbial community functioning to drought and drying–rewetting (D/RW), and second tested the ability to alter resistance and resilience through additional perturbation cycles. A history of summer drought in the field selected for increased resilience but not resistance, suggesting that rewetting after drought, rather than low moisture levels during drought, was the selective pressure shaping the microbial community functions. Laboratory D/RW cycles also selected for communities with a higher resilience rather than increased resistance. The ratio of respiration to bacterial growth during D/RW perturbation was lower for the field drought‐exposed communities and decreased for both field treatments during the D/RW cycles. This suggests that cycles of D/RW also structure microbial communities to respond quickly and efficiently to rewetting after drought. Our findings imply that microbial communities can adapt to changing climatic conditions and that this might slow the rate of soil C loss predicted to be induced by future cyclic drought.     

Role of host identity in effects of phytogenic mounds on plant assemblages and species richness on coastal arid dunes

Question: Phytogenic mounds (nebkhas) ‐ the natural accumulation of wind‐blown sediments within or around the canopies of plants ‐ have been proposed as important structures for locally maintaining high species richness in coastal and arid ecosystems. Nebkhas are assumed to increase habitat heterogeneity, but what is the importance of the nebkha host species relative to other nebkha characteristics in determining the associated plant assemblages? Are some host species more effective in creating diversity hotspots, or does a single species‐area relationship apply to all nebkhas, regardless of host species? Can the influence of the host be ascribed to its indirect effects on abiotic attributes of the nebkha complex? Methods and location: We investigated plant species richness and composition on nebkhas around six psammophytic species on Mediterranean coastal dunes of the Sinai Peninsula. Results: Plant species richness was significantly related to nebkha size by the single power function according to the general prediction of island biogeography theory, but this relationship was modified ‐ though to a limited degree ‐ by nebkha host species identity. Canonical Correspondence Analysis revealed that nebkha host species identity and nebkha environmental and non‐environmental factors significantly explained species composition on the nebkhas, but host species identity did so to a greater extent. The latter might reflect differences in seed trapping ability or free space for colonization between host species. Conclusion: Differences in community composition and richness among nebkhas formed by different host species represent a key factor in the maintenance of plant diversity on arid coastal dunes.     

A detailed linkage map of lettuce based on SSAP, AFLP and NBS markers

Molecular markers based upon a novel lettuce LTR retrotransposon and the nucleotide binding site-leucine-rich repeat (NBS-LRR) family of disease resistance-associated genes have been combined with AFLP markers to generate a 458 locus genetic linkage map for lettuce. A total of 187 retrotransposon-specific SSAP markers, 29 NBS-LRR markers and 242 AFLP markers were mapped in an F₂ population, derived from an interspecific cross between a Lactuca sativa cultivar commonly used in Europe and a wild Lactuca serriola isolate from Northern Europe. The cross has been designed to aid efforts to assess gene flow from cultivated lettuce into the wild in the perspective of genetic modification biosafety. The markers were mapped in nine major and one minor linkage groups spanning 1,266.1 cM, with an average distance of 2.8 cM between adjacent mapped markers. The markers are well distributed throughout the lettuce genome, with limited clustering of different marker types. Seventy-seven of the AFLP markers have been mapped previously and cross-comparison shows that the map from this study corresponds well with the previous linkage map.     

Spatial ecological and genetic structure of a mixed population of sexual diploid and apomictic triploid dandelions

Ecological differentiation is widely seen as an important factor enabling the stable coexistence of closely related plants of different ploidy levels. We studied ecological and genetic differentiation between co-occurring sexual diploid and apomictic triploid Taraxacum section Ruderalia by analysing spatial patterns both in the distribution of cytotypes and in the distribution of genetic variation within and between the cytotypes. A significant relationship between ploidy level and elevation was found. This mode of ecological differentiation however, was not sufficient to explain the significant spatial structure in the distribution of diploids and triploids within the population. Strong congruence was found between the spatial genetic patterns within the diploids and within the triploids. We argue that this congruence is an indication of gene flow between neighbouring plants of different ploidy levels.     

The effect of an early-season short-term heat pulse on plant recruitment in the Arctic

Climate change will cause large-scale plant migration. Seedling recruitment constitutes a bottleneck in the migration process but is itself climate-dependent. We tested the effect of warming on early establishment of three Arctic pioneer species, while holding other environmental variables constant. Seeds and bulbils were sown in artificial gaps in dry Arctic tundra and subjected to a 13-day heating of the soil surface by 2–8°C, simulating temperature increases ranging from the general summer warming to heat waves projected to occur more frequently with global warming. All species showed decreased establishment with increasing soil surface temperature. The short-term heat pulse decreased establishment of Polygonum viviparum and Saxifraga cernua, whereas establishment of Cerastium alpinum decreased with temperature due to more permanent natural variation in micro-climate. The treatment effects increased by the quadrat of the temperature increase. Warming and in particular heat waves may result in declining establishment of Arctic plants in dry tundra regions. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Leaf and canopy responses of Lolium perenne to long-term elevated atmospheric carbon-dioxide concentration

The relationship between leaf photosynthetic capacity (p _{n, max}), net canopy CO₂- and H₂O-exchange rate (NCER and E _t, respectively) and canopy dry-matter production was examined in Lollium perenne L. cv. Vigor in ambient (363±30 l· l^-1) and elevated (631±43 l·l^-1) CO₂ concentrations. An open system for continuous and simultaneous regulation of atmospheric CO₂ concentration and NCER and E _t measurement was designed and used over an entire growth cycle to calculate a carbon and a water balance. While NCER_max of full-grown canopies was 49% higher at elevated CO₂ level, stimulation of p _n, max was only 46% (in spite of a 50% rise in one-sided stomatal resistance for water-vapour diffusion), clearly indicating the effect of a higher leaf-area index under high CO₂ (approx. 10% in one growing period examined). A larger amount of CO₂-deficient leaves resulted in higher canopy dark-respiration rates and higher canopy light compensation points. The structural component of the high-CO₂ effect was therefore a disadvantage at low irradiance, but a far greater benefit at high irradiance. Higher canopy darkrespiration rates under elevated CO₂ level and low irradiance during the growing period are the primary causes for the increase in dry-matter production (19%) being much lower than expected merely based on the NCER_max difference. While total water use was the same under high and low CO₂ levels, water-use efficiency increased 25% on the canopy level and 87% on a leaf basis. In the course of canopy development, allocation towards the root system became greater, while stimulation of shoot dry-matter accumulation was inversely affected. Over an entire growing season the root/shoot production ratio was 22% higher under high CO₂ concentration.Abbreviations and symbols C350 ambient CO₂, 363±30 l·l^-1 - C600 high CO₂, 631±43 l·l^-1 - c _a atmospheric CO₂ level - c _i CO₂ concentration in the intracellular spaces of the leaf - E_t canopy evapotranspiration - I _o canopy light compensation point - NCER canopy CO₂-exchange rate - p _n leaf photosynthetic rate - PPFD photosynthetic photon flux density - r _a leaf boundary-layer resistance - RD canopy dark-respiration rate - r _s stomatal resistance - WUE water use efficiency