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91.
We propose a simple model for genetic adaptation to a changing environment, describing a fitness landscape characterized by two maxima. One is associated with “specialist” individuals that are adapted to the environment; this maximum moves over time as the environment changes. The other maximum is static, and represents “generalist” individuals not affected by environmental changes. The rest of the landscape is occupied by “maladapted” individuals. Our analysis considers the evolution of these three subpopulations. Our main result is that, in presence of a sufficiently stable environmental feature, as in the case of an unchanging aspect of a physical habitat, specialists can dominate the population. By contrast, rapidly changing environmental features, such as language or cultural habits, are a moving target for the genes; here, generalists dominate, because the best evolutionary strategy is to adopt neutral alleles not specialized for any specific environment. The model we propose is based on simple assumptions about evolutionary dynamics and describes all possible scenarios in a non-trivial phase diagram. The approach provides a general framework to address such fundamental issues as the Baldwin effect, the biological basis for language, or the ecological consequences of a rapid climate change. 相似文献
92.
End-to-end automated microfluidic platform for synthetic biology: from design to functional analysis
Gregory?LinshizEmail author Erik?Jensen Nina?Stawski Changhao?Bi Nick?Elsbree Hong?Jiao Jungkyu?Kim Richard?Mathies Jay?D.?Keasling Nathan?J.?HillsonEmail author 《Journal of biological engineering》2016,10(1):3
Background
Synthetic biology aims to engineer biological systems for desired behaviors. The construction of these systems can be complex, often requiring genetic reprogramming, extensive de novo DNA synthesis, and functional screening.Results
Herein, we present a programmable, multipurpose microfluidic platform and associated software and apply the platform to major steps of the synthetic biology research cycle: design, construction, testing, and analysis. We show the platform’s capabilities for multiple automated DNA assembly methods, including a new method for Isothermal Hierarchical DNA Construction, and for Escherichia coli and Saccharomyces cerevisiae transformation. The platform enables the automated control of cellular growth, gene expression induction, and proteogenic and metabolic output analysis.Conclusions
Taken together, we demonstrate the microfluidic platform’s potential to provide end-to-end solutions for synthetic biology research, from design to functional analysis.93.
The Role of 3D Molecular Structural Control in New Hole Transport Materials Outperforming Spiro‐OMeTAD in Perovskite Solar Cells 下载免费PDF全文
94.
It is important for biology to understand if observations made in highly reductionist laboratory settings generalise to harsh and noisy natural environments in which genetic variation is sorted to produce adaptation. But what do we learn by studying, in the laboratory, a genetically diverse population that mirrors the wild? What is the best design for studying genetic variation? When should we consider it at all? The right experimental approach depends on what you want to know. 相似文献
95.
Lara D. Shepherd Peter J. de Lange Simon Cox Patricia A. McLenachan Nick R. Roskruge Peter J. Lockhart 《PloS one》2016,11(3)
We use chloroplast DNA sequencing to examine aspects of the pre-European Māori cultivation of an endemic New Zealand root crop, Arthropodium cirratum (rengarenga). Researching the early stages of domestication is not possible for the majority of crops, because their cultivation began many thousands of years ago and/or they have been substantially altered by modern breeding methods. We found high levels of genetic variation and structuring characterised the natural distribution of A. cirratum, while the translocated populations only retained low levels of this diversity, indicating a strong bottleneck even at the early stages of this species’ cultivation. The high structuring detected at four chloroplast loci within the natural A. cirratum range enabled the putative source(s) of the translocated populations to be identified as most likely located in the eastern Bay of Plenty/East Cape region. The high structuring within A. cirratum also has implications for the conservation of genetic diversity within this species, which has undergone recent declines in both its natural and translocated ranges. 相似文献
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97.
David A. Norton Laura M. Young Andrea E. Byrom Bruce D. Clarkson Phil O'B. Lyver Matt S. McGlone Nick W. Waipara 《Ecological Management & Restoration》2016,17(3):170-179
If we are to make meaningful and measurable progress in restoring New Zealand's biological heritage by 2050, a range of fundamental issues need to be addressed. These relate not just to restoration science but also to building ecosystem resilience in the wider socio‐economic and cultural context within which restoration occurs. 相似文献
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99.
Jun Zhang Kevin A. Fengler John L. Van Hemert Rajeev Gupta Nick Mongar Jindong Sun William B. Allen Yang Wang Benjamin Weers Hua Mo Renee Lafitte Zhenglin Hou Angela Bryant Farag Ibraheem Jennifer Arp Kankshita Swaminathan Stephen P. Moose Bailin Li Bo Shen 《Plant biotechnology journal》2019,17(12):2272-2285
100.
Dhimant Desai Matthew Lauver Alexandria Ostman Linda Cruz Kevin Ferguson Ge Jin Brianne Roper Daniel Brosius Aron Lukacher Shantu Amin Nick Buchkovich 《Bioorganic & medicinal chemistry》2019,27(9):1795-1803
Opportunistic viruses are a major problem for immunosuppressed individuals, particularly following organ or stem cell transplantation. Current treatments are non-existent or suffer from problems such as high toxicity or development of resistant strains. We previously published that a trafficking inhibitor that targets a host protein greatly reduces the replication of human cytomegalovirus. This inhibitor was also shown to be moderately effective against polyomaviruses, another family of opportunistic viruses. We have developed a panel of analogues for this inhibitor and have shown that these analogues maintain their high efficacy against HCMV, while substantially lowering the concentration required to inhibit polyomavirus replication. By targeting a host protein these compounds are able to inhibit the replication of two very different viruses. These observations open up the possibility of pan-viral inhibitors for immunosuppressed individuals that are effective against multiple, diverse opportunistic viruses. 相似文献