Spatial population genomics of the brown rat (Rattus norvegicus) in New York City

Human commensal species such as rodent pests are often widely distributed across cities and threaten both infrastructure and public health. Spatially explicit population genomic methods provide insights into movements for cryptic pests that drive evolutionary connectivity across multiple spatial scales. We examined spatial patterns of neutral genomewide variation in brown rats (Rattus norvegicus) across Manhattan, New York City (NYC), using 262 samples and 61,401 SNPs to understand (i) relatedness among nearby individuals and the extent of spatial genetic structure in a discrete urban landscape; (ii) the geographic origin of NYC rats, using a large, previously published data set of global rat genotypes; and (iii) heterogeneity in gene flow across the city, particularly deviations from isolation by distance. We found that rats separated by ≤200 m exhibit strong spatial autocorrelation (r = .3, p = .001) and the effects of localized genetic drift extend to a range of 1,400 m. Across Manhattan, rats exhibited a homogeneous population origin from rats that likely invaded from Great Britain. While traditional approaches identified a single evolutionary cluster with clinal structure across Manhattan, recently developed methods (e.g., fineSTRUCTURE, sPCA, EEMS) provided evidence of reduced dispersal across the island's less residential Midtown region resulting in fine‐scale genetic structuring (F_ST = 0.01) and two evolutionary clusters (Uptown and Downtown Manhattan). Thus, while some urban populations of human commensals may appear to be continuously distributed, landscape heterogeneity within cities can drive differences in habitat quality and dispersal, with implications for the spatial distribution of genomic variation, population management and the study of widely distributed pests.     

Post-embryonic development of water- and airbreathing organs of Anabas testudineus (Bloch)

The development of respiratory surfaces in post-embryonic stages of Anabas testudineus was studied using morphometric methods on serial sections through the pharyngeal region of specimens obtained by induced breeding of known parentage. The larvae and fry were fixed in glutaraldehyde and osmium tetroxide. In the young stages aquatic respiration was found to be obligatory. The hatchlings come out of the egg membranes about 10 h after fertilization. During the yolk-sac stages gaseous exchange takes place through the well vascularized skin. The gills start differentiating at about 24 h and become functional at about 39 h. The labyrinthine organs begin to develop after 51 h but the hatchlings do not take an air breath until they reach 13–14 days. The appearance of scales at 11–14 days probably hinders cutaneous respiration and is correlated with the onset of aerial respiration.
Morphometric analysis using stereological methods shows high surface: volume ratios for the gills and labyrinthine organs as adaptations to gas exchange function. A marked decrease in surface: volume ratio for the suprabranchial cavities between 7 and 11 days indicates an increase in volume to accommodate the expanding labyrinthine plates which retain a fairly constant surface: volume ratio.     

Lipid biosynthesis in seeds of mustard (Brassica juncea) influenced by zinc and sulphur deficiency

In developing seeds of mustard ( Brassica juncea L. cv. RLM 198) the period between 20 and 30 days after fertilization (DAF) was identified as the period of active lipid biosynthesis, although dry matter continued to accumulate until maturity. The period of lipid synthesis was associated with a decrease in starch, soluble sugars and protein, thus, giving rise to precursors for the biosynthesis of lipids. Besides decreasing the dry matter content (on both % and seed basis), Zn and S deficiency caused a significant ( P > 0.05) reduction in oil content. As compared to control, the decrease in oil content was 11, 12 and 18% at 30 DAF and 4, 9 and 16% at maturity in Zn, S and (Zn+S) deficient treatments, respectively. Throughout the period of seed development, a significant decrease in starch and protein with a slight accumulation of soluble sugars was observed due to deficiency of Zn or S. The rate of [l-¹⁴C]-acetate incorporation into total lipids, which was maximal at 30 DAF, also displayed a significant decrease due to the abovementioned mineral deficiencies. Addition of Zn or S in vitro, enhanced the lipid synthesis at all stages of seed development. Under Zn and S deficiency, the phospholipids increased from 10 to 30 DAF and then declined until maturity. However, the proportion of glycolipids and free fatty acids increased, with a corresponding decrease in total glycerides. Further, in deficiency treatments, there was an increase in 22:1 with a corresponding decrease in 18:1, 18:2 and 18:3 in developing and mature mustard seeds.     

Oxygen uptake capacity of gills and skin in relation to body weight of the air-breathing siluroid fish, Clarias batrachus (Linn.).

Oxygen consumption through gills and skin in relation to body weight was estimated in the air-breathing catfish, Clarias batrachus, under two experimental conditions, viz., (i) when access to air was allowed and (ii) when air-breathing was prevented. There was a positive correlation between VO2 (ml/hr) and body weight in both experimental conditions. Oxygen consumption (ml/hr) increased by a power of 0.869 when access to air was allowed whereas the power was slightly less (b = 0.841) when air-breathing was prevented. As the values for exponent (b) were less than 1.0, the weight specific VO2 (ml/kg/hr) decreased with increasing body weight. The decrease was more marked (b = - 0.180) in fishes which were not allowed air than in those where access to air was allowed (b = - 0.148). Under normal conditions of water and air-breathing the rate of VO2 (ml/kg/hr) via gills and skin from water ranged from 39.7 +/- 3.21 to 76.7 +/- 9.01 and this increased to 42.17 +/- 6.2 to 105.9 +/- 8.33 when air-breathing was prevented. The increase in the rate of VO2 was perhaps associated with the increase in the volume of water irrigating the gills per unit time.     

Nature of the air-breathing organs of the Indian fishes Channa, Amphipnous, Clarias and Saccobranchus as shown by electron microscopy

The structure of the air-breathing organs of the Indian fishes Channa punctatus, Channa Striatus, Amphipnous cuchia, Clarias batrachus and Saccobranchus fossilis has been investigated using electron microscopy. In all species the barrier separating the air from the blood consists of three main layers (epithelium, basal lamina and endothelium). The total thickness ranging from 0.78 μm in C. punctatus 1.6 μm in S. fossilis.
In Clarias and Saccobranchus the presence of pillar cells characteristic of gill secondary lamellae confirms evidence for the origin of these organs by modification of a typical gill structure.
In Amphipnous and two species of Channa , however, the evidence suggests that the accessory organs represent modified gills. The presence of valve-like structures between the afferent and efferent blood spaces of the vascular papillae gave the appearance of pillar cells under the light microscope.
The structure of these organs is correlated with physiological studies on the degree of their importance in the life of the animal and the degree of gill development