Regulatory networks upon neurogenesis induction in PC12 cell line by small molecules

Alteration in the normal regulatory pathway of differentiation can lead to the induction of programmed cell death. Accordingly, some chemicals like staurosporine, nerve growth factor, pituitary adenylate cyclase activating peptide, and trimethyltin are shown to be able to induce differentiation in vitro, via different mechanisms in the PC12 cell line. Hence, understanding the details of the molecular mechanisms of differentiation induction by these small molecules are important for further application of these molecules in neurogenesis. Therefore, we sought to determine these signaling pathways, using gene regulatory networks analysis. Then, we have conducted a comparative analysis of the alterations in the gene expression pattern of the PC12 cell lines in response to these chemicals at the early stages. Based on the comparative analysis and previous knowledge, we have proposed the affected pathways during differentiation and apoptosis. Our findings could be useful in the development of protocols to reprogramming of neurons by such small molecules with high efficiency.     

Insights into the strength and nature of carbene···halogen bond interactions: a theoretical perspective

Halogen-bonding, a noncovalent interaction between a halogen atom X in one molecule and a negative site in another, plays critical roles in fields as diverse as molecular biology, drug design and material engineering. In this work, we have examined the strength and origin of halogen bonds between carbene CH₂ and XCCY molecules, where X?=?Cl, Br, I, and Y?=?H, F, COF, COOH, CF₃, NO₂, CN, NH₂, CH₃, OH. These calculations have been carried out using M06-2X, MP2 and CCSD(T) methods, through analyses of surface electrostatic potentials V _S(r) and intermolecular interaction energies. Not surprisingly, the strength of the halogen bonds in the CH₂···XCCY complexes depend on the polarizability of the halogen X and the electron-withdrawing power of the Y group. It is revealed that for a given carbene···X interaction, the electrostatic term is slightly larger (i.e., more negative) than the dispersion term. Comparing the data for the chlorine, bromine and iodine substituted CH₂···XCCY systems, it can be seen that both the polarization and dispersion components of the interaction energy increase with increasing halogen size. One can see that increasing the size and positive nature of a halogen’s σ-hole markedly enhances the electrostatic contribution of the halogen-bonding interaction.

Bacteriophage recombination systems and biotechnical applications

Bacteriophage recombination systems have been widely used in biotechnology for modifying prokaryotic species, for creating transgenic animals and plants, and more recently, for human cell gene manipulation. In contrast to homologous recombination, which benefits from the endogenous recombination machinery of the cell, site-specific recombination requires an exogenous source of recombinase in mammalian cells. The mechanism of bacteriophage evolution and their coexistence with bacterial cells has become a point of interest ever since bacterial viruses’ life cycles were first explored. Phage recombinases have already been exploited as valuable genetic tools and new phage enzymes, and their potential application to genetic engineering and genome manipulation, vectorology, and generation of new transgene delivery vectors, and cell therapy are attractive areas of research that continue to be investigated. The significance and role of phage recombination systems in biotechnology is reviewed in this paper, with specific focus on homologous and site-specific recombination conferred by the coli phages, λ, and N15, the integrase from the Streptomyces phage, ΦC31, the recombination system of phage P1, and the recently characterized recombination functions of Yersinia phage, PY54. Key steps of the molecular mechanisms involving phage recombination functions and their application to molecular engineering, our novel exploitations of the PY54-derived recombination system, and its application to the development of new DNA vectors are discussed.     

Increases in egg production in multiply mated female bushcrickets Leptophyes punctatissima are not due to substances in the nuptial gift

Abstract. 1. A positive effect of the degree of polyandry on egg production is widespread in insects, particularly in species in which the male provides a nuptial gift.
2. This study aimed to determine whether or not this effect is due to females using nutrients from the nuptial gift (spermatophore and spermatophylax) to manufacture more eggs in the bushcricket Leptophyes punctatissima .
3. Females were permitted either a single or a double mating (with two different males) and, in both mating categories, were either prevented from consuming any part of the spermatophore or were permitted to consume the entire spermatophore.
4. Doubly mated females were found to lay over twice as many eggs over a 4-week period compared with singly mated females. This difference did not appear to be caused by the consumption of extra nuptial gift material: mating was found to have a significant positive effect on the number of eggs laid, while nuptial gift feeding had no effect.     

Tumour cell‐intrinsic CTLA4 regulates PD‐L1 expression in non‐small cell lung cancer

Cytotoxic T lymphocyte antigen 4 (CTLA4) and programmed cell death protein 1 (PD‐1) are immune checkpoint proteins expressed in T cells. Although CTLA4 expression was found in multiple tumours including non‐small cell lung cancer (NSCLC) tissues and cells, its function in tumour cells is unknown. Recently, PD‐1 was found to be expressed in melanoma cells and to promote tumorigenesis. We found that CTLA4 was expressed in a subset of NSCLC cell lines and in a subgroup of cancer cells within the lung cancer tissues. We further found that in NSCLC cells, anti‐CTLA4 antibody can induce PD‐L1 expression, which is mediated by CTLA4 and the EGFR pathway involving phosphorylation of MEK and ERK. In CTLA4 knockout cells, EGFR knockout cells or in the presence of an EGFR tyrosine kinase inhibitor, anti‐CTLA4 antibody was not able to induce PD‐L1 expression in NSCLC cells. Moreover, anti‐CTLA4 antibody promoted NSCLC cell proliferation in vitro and tumour growth in vivo in the absence of adaptive immunity. These results suggest that tumour cell‐intrinsic CTLA4 can regulate PD‐L1 expression and cell proliferation, and that anti‐CTLA4 antibody, by binding to the tumour cell‐intrinsic CTLA4, may result in the activation of the EGFR pathway in cancer cells.     

Coercive Copulation in the Alpine Bushcricket Anonconotus alpinus Yersin (Tettigoniidae: Tettigoniinae: Platycleidini)

Sexual coercion in the form of forced copulation is widespread in the animal kingdom and has been documented in several insect taxa. In crickets and bushcrickets (sub‐order Ensifera), however, mating typically involves luring acts as opposed to forcing acts. The mating behaviour of the tettigoniid Anonconotus alpinus Yersin, which is described in this paper, appears to be unique amongst the Tettigoniidae (and possibly amongst the Ensifera) in that it is coercive, involving forced matings. Males did not stridulate immediately prior to mating but instead leapt on passing females, using their anal cerci as pincers to maintain a hold on the female's abdomen (which was sometimes damaged in the process). Males appeared to lack a sexual refractory period and attempted to copulate again as little as 18 s following the previous mating.     

Fertility life table parameters of different strains of Trichogramma spp. collected from eggs of the carob moth Ectomyelois ceratoniae

Fertility life table parameters were assessed for five populations (strains) of two Trichogramma species, T. embryophagum Hartig and T. principium Sugonyaev & Sorokina, collected from eggs of the carob moth Ectomyelois ceratoniae (Zeller) in Iranian pomegranate orchards. Four combinations of two constant temperatures (25°C, 30°C) and two relative humidity levels (50% RH, 70% RH) were used. The overall intrinsic rate of natural increase (r_m) was significantly decreased with decreased relative humidity but was uninfluenced by temperature. The highest and lowest r_m values were observed in T. embryophagum from Qum (0.34 ± 0.004) and T. embryophagum from Varamin (0.13 ± 0.01), respectively. Two‐way interaction analyses revealed that the strains had significantly different responses in their r_m values at different temperatures and relative humidities. In general, r_m values were significantly higher at 25°C and 70% RH than at 30°C and 50% RH. The Qum strain of T. embryophagum was the most promising candidate to be considered as a biocontrol agent against E. ceratoniae due to its high reproductive rate (0.27 ± 0.01) at conditions (30°C and 50% RH) similar to the actual climatic conditions in Iranian pomegranate orchards during the major part of the growing season.     

The potential of phytoremediation using hyperaccumulator plants: a case study at a lead-zinc mine site

Contamination with heavy metals is one of the most pressing threats to water and soil resources, as well as human health. Phytoremediation might potentially be used to remediate metal-contaminated sites. A major advance in the development of phytoremediation for heavy metal affected soils was the discovery of heavy metal hyperaccumulation in plants. This study applied several established criteria to identify hyperaccumulator plants. A case study was conducted at a mining area in the Hamedan province in the west central region of Iran. The results indicated that plant metal accumulation differed among species and plant parts. Plant species grown in substrata with elevated metal levels contained significantly higher metal levels. Using the most common criteria, Euphorbia macroclada and Centaurea virgata can be classified as hyperaccumulators of specific heavy metals measured in this study and they might potentially be used for the phytoremediation of contaminated soils.     

Stability of neural differentiation in human adipose derived stem cells by two induction protocols

There are some evidences for suggesting that adipose derived stem cells (ADSCs) can be differentiated to the fate of neural cell type. ADSCs can be expanded rapidly in vitro and can be obtained by a less invasive method. In this study, we attempted to compare the stability of neural differentiation in human ADSCs by using two induction protocols.Isolated ADSCs were induced into neural-like cells using diverse effects of two specific procedures. For protocol 1, ADSCs were induced by chemical induction. In protocol 2, ADSCs were treated for sphere formation. Then, the singled cells were cultured in neurobasal media supplemented with special components. Differentiated ADSCs were evaluated for Nestin, MAP2 and GFAP expression by immunocytochemistry and semi quantitative RT-PCR techniques. Moreover, MTT assay was employed to detect cell viability and proliferation.Immunocytochemical analysis of both protocols demonstrated that ADSCs had large expression of the neural-specific markers. In RT-PCR, protocol 1 showed the highest percentage of MAP2 expression, but with time passing, the neural like state was reversible. Protocol 2 found with express of Nestin at week 1, however MAP2 and GFAP expression increased after 3 weeks. The neural-like cells produced by protocol 1 led to the further cell death.Comparative analysis showed that neural-like cell differentiation of ADSCs in chemical induction protocol was rapid but transitory, while it was approximately steady in neurosphere formation protocol.