Characterization of 36 polymorphic microsatellite loci in the Kentish plover (Charadrius alexandrinus) including two sex‐linked loci and their amplification in four other Charadrius species

We isolated 45 new Kentish plover (Charadrius alexandrinus) microsatellite loci. These were tested for polymorphism in 42 Kentish plovers breeding in the Çukurova Delta, Turkey. Thirty‐six of the 45 loci were polymorphic with observed heterozygosity varying between 0.22 and 0.93. Genotypes of individuals of known sex indicated that two loci were sex‐linked (Calex‐26 is located on the Z chromosome and Calex‐31 on the W chromosome). Additionally, we tested all loci for amplification in four other species of Charadridae (Kittlitz's plover, Madagascar plover, three‐banded plover and white‐fronted plover). On average 34 loci amplified per species (range 29–36).     

Inter‐regional comparison of land‐use effects on stream metabolism

1. Rates of whole‐system metabolism (production and respiration) are fundamental indicators of ecosystem structure and function. Although first‐order, proximal controls are well understood, assessments of the interactions between proximal controls and distal controls, such as land use and geographic region, are lacking. Thus, the influence of land use on stream metabolism across geographic regions is unknown. Further, there is limited understanding of how land use may alter variability in ecosystem metabolism across regions. 2. Stream metabolism was measured in nine streams in each of eight regions (n = 72) across the United States and Puerto Rico. In each region, three streams were selected from a range of three land uses: agriculturally influenced, urban‐influenced, and reference streams. Stream metabolism was estimated from diel changes in dissolved oxygen concentrations in each stream reach with correction for reaeration and groundwater input. 3. Gross primary production (GPP) was highest in regions with little riparian vegetation (sagebrush steppe in Wyoming, desert shrub in Arizona/New Mexico) and lowest in forested regions (North Carolina, Oregon). In contrast, ecosystem respiration (ER) varied both within and among regions. Reference streams had significantly lower rates of GPP than urban or agriculturally influenced streams. 4. GPP was positively correlated with photosynthetically active radiation and autotrophic biomass. Multiple regression models compared using Akaike’s information criterion (AIC) indicated GPP increased with water column ammonium and the fraction of the catchment in urban and reference land‐use categories. Multiple regression models also identified velocity, temperature, nitrate, ammonium, dissolved organic carbon, GPP, coarse benthic organic matter, fine benthic organic matter and the fraction of all land‐use categories in the catchment as regulators of ER. 5. Structural equation modelling indicated significant distal as well as proximal control pathways including a direct effect of land‐use on GPP as well as SRP, DIN, and PAR effects on GPP; GPP effects on autotrophic biomass, organic matter, and ER; and organic matter effects on ER. 6. Overall, consideration of the data separated by land‐use categories showed reduced inter‐regional variability in rates of metabolism, indicating that the influence of agricultural and urban land use can obscure regional differences in stream metabolism.     

Kahnawa:ke: Factionalism, Traditionalism, and Nationalism in a Mohawk Community

Kahnawa:ke: Factionalism, Traditionalism, and Nationalism in. Mohawk Community . Gerald F. Reid. Lincoln: University of Nebraska Press, 2004. 235 pp.     

Stress Response of Working African Elephants to Transportation and Safari Adventures

Abstract: African elephants (Loxodonta africana) are intensively managed in southern Africa and are routinely translocated between reserves. Domesticated elephants are used for elephant-back safaris and interactions with guests. Understanding how elephants respond to such activities is critical because of welfare issues associated with both humans and elephants. We investigated the stress response (i.e., fecal glucocorticoid metabolite secretion [FGM]) of working elephants in Letsatsing Game Reserve, South Africa, over 1 year to evaluate their response to transportation and ecotourism activities. We used free-ranging elephants in adjacent Pilanesburg National Park as controls. Fecal glucocorticoid metabolites were greatest prior to and during translocation and declined over the year. Within 1–2 months of transportation, FGM levels in working elephants became indistinguishable from those in wild elephants. Fecal glucocorticoid metabolite levels were higher during human interaction days than days without interaction. The highest observed FGM levels were associated with transportation and episodic loud noises. Transportation is a stressful activity for elephants, and ≥3 months should be provided to translocated elephants to acclimate to their new surroundings. Although stress levels of elephants increased slightly when interacting with humans in the contexts we studied, evaluating interactions under a wider range of contexts is necessary to minimize danger to elephants and humans.     

Movements of self-marked caddisfly larvae, Chyrnda centralis (Trichoptera: Limnephilidae), in a Sierran spring stream, California, U.S.A.

SUMMARY. 1. The tendency of larvae of Chyranda centralis to mark themselves by adding coloured plastic segments to their cases was used to study instream movements of the species. Plastic strips of different colours were placed at measured distances down a small spring stream and larvae cut pieces and incorporated them in their cases.
2. Over 50% of the marked population moved upstream into cooler water prior to pupation in an exceptionally dry year. The greatest distance moved upstream by a single larva was 56.9m, In a wet year, when daytime stream temperatures were cooler, 11–28% of the marked population moved upstream. Downstream movement occurred in both years late in the fifth instar.
3. Larvae selected yellow in preference to other colours in laboratory tests and they preferred heavy, textured plastic to light, smooth plastic as they neared pupation.
4. Upstream movements, found also in Desmana bethula (Trichoptera: Limnephilidae) in the same spring stream, may be an adaptation for avoiding pupation in areas of high temperature, low oxygen concentration, or intermittent flow.     

On the use of large marker panels to estimate inbreeding and relatedness: empirical and simulation studies of a pedigreed zebra finch population typed at 771 SNPs

In recent years there has been a dramatic increase in the availability of high density genetic marker data for both model and non‐model organisms. A potential application of these data is to infer relatedness in the absence of a complete pedigree. Using a marker panel of 771 SNPs genotyped in three generations of an extensive zebra finch pedigree, correlations between pedigree relatedness and seven marker‐based estimates of relatedness were examined, as was the relationship between heterozygosity and inbreeding. Although marker‐based and pedigree relatedness were highly correlated, the variance in estimated relatedness was high. Further, the correlation between heterozygosity and inbreeding was weak, even though mean inbreeding coefficient is typical of that seen in wild vertebrate pedigrees; the weak relationship was in part due to the small variance in inbreeding in the pedigree. Our data suggest that using marker information to reconstruct the pedigree, and then calculating relatedness from the pedigree, is likely to give more accurate relatedness estimates than using marker‐based estimators directly.     

Diagnostic Genetic Marker That Differentiates Eastern Fox Squirrels From Eastern Gray Squirrels

Abstract The Delmarva fox squirrel (Sciurus niger cinereus) has been listed as endangered by the United States Department of Interior since 1967. A high-priority task for the recovery of this taxon is to determine its current geographic distribution. Toward this end, we have identified a microsatellite locus that unambiguously differentiates Delmarva fox squirrels from eastern gray squirrels (S. carolinensis), which frequently co-occur with Delmarva fox squirrels. Analysis of this marker in noninvasively collected hair samples will allow unequivocal identification of localities occupied by Delmarva fox squirrels with a minimum investment of funds, time, and effort because handling individuals will be unnecessary. This protocol will expedite site review in connection with the Endangered Species Act consultation process.     

A Secondary Alcohol Dehydrogenase from Tetrahymena furgasoni1

ABSTRACT. Dehydrogenase activity with hydroxysteroids has been observed in Tetrahymena furgasoni (formerly T. pyriformis strain W), and the enzyme responsible has been isolated from this organism. The purified dehydrogenase is active with a variety of steroid alcohols at apparent K_m values ranging from 0.2 to 4.0 mM. The C-3 hydroxyl of ring A of the steroid nucleus is the preferred position of oxidation. However, a variety of other secondary alcohols are also substrates, with apparent K_m values for 2-butanol, 2-pentanol, and cyclohexanol of 880, 1000. and 150 mM, respectively. With both steroidal and nonsteroidal alcohols. NAD is the preferred co-substrate, although low activity with NADP is observed. Evidence is presented that the activity with secondary alcohols, whether steroidal or not, is the property of a single protein species.