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91.
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93.
James P Higham Michael Heistermann Carina Saggau Muhammad Agil Dyah Perwitasari-Farajallah Antje Engelhardt 《BMC evolutionary biology》2012,12(1):1-10
Background
Host-parasite coevolution can lead to local adaptation of either parasite or host if there is specificity (GxG interactions) and asymmetric evolutionary potential between host and parasite. This has been demonstrated both experimentally and in field studies, but a substantial proportion of studies fail to detect such clear-cut patterns. One explanation for this is that adaptation can be masked by counter-adaptation by the antagonist. Additionally, genetic architecture underlying the interaction is often highly complex thus preventing specific adaptive responses. Here, we have employed a reciprocal cross-infection experiment to unravel the adaptive responses of two components of fitness affecting both parties with different complexities of the underlying genetic architecture (i.e. mortality and spore load). Furthermore, our experimental coevolution of hosts (Tribolium castaneum) and parasites (Nosema whitei) included paired replicates of naive hosts from identical genetic backgrounds to allow separation between host- and parasite-specific responses.Results
In hosts, coevolution led to higher resistance and altered resistance profiles compared to paired control lines. Host genotype × parasite genotype interactions (GH × GP) were observed for spore load (the trait of lower genetic complexity), but not for mortality. Overall parasite performance correlated with resistance of its matching host coevolution background reflecting a directional and unspecific response to strength of selection during coevolution. Despite high selective pressures exerted by the obligatory killing parasite, and host- and parasite-specific mortality profiles, no general pattern of local adaptation was observed, but one case of parasite maladaptation was consistently observed on both coevolved and control host populations. In addition, the use of replicate control host populations in the assay revealed one case of host maladaptation and one case of parasite adaptation that was masked by host counter-adaptation, suggesting the presence of complex and probably dynamically changing fitness landscapes.Conclusions
Our results demonstrate that the use of replicate naive populations can be a useful tool to differentiate between host and parasite adaptation in complex and dynamic fitness landscapes. The absence of clear local adaptation patterns during coevolution with a sexual host showing a complex genetic architecture for resistance suggests that directional selection for generality may be more important attributes of host-parasite coevolution than commonly assumed. 相似文献94.
Nida Iram Muhammad Salahuddin Shah Fouzia Ismat Mudasser Habib Mazhar Iqbal S. Samar Hasnain Moazur Rahman 《Applied microbiology and biotechnology》2014,98(4):1691-1701
Newcastle disease virus (NDV) is an infectious agent of a large variety of birds, including chicken, which poses a real threat to the agriculture industry. Matrix (M) proteins of NDV and many other viruses perform critical functions during viral assembly and budding from the host cell. M-proteins are well conserved and therefore are potential targets for antiviral therapies. To validate this, we expressed the NDV M-protein in its native form in Saccharomyces cerevisiae and in inclusion bodies in Escherichia coli. Proper refolding of the recombinant protein produced in E. coli was verified using circular dichroism and infrared spectroscopies and electron microscopy. Immunization of chickens with the NDV M-protein elicited significant serum antibody titers. However, the antibodies conferred little protection against the ND following lethal viral challenges. We conclude that the M-protein is not exposed on the surface of the host cell or the virus at any stage during its life cycle. We discuss how the conserved M-protein can further be exploited as an antiviral drug target. 相似文献
95.
Sanitary landfilling is a proven way for disposal of municipal solid waste (MSW) in developed countries in general and in developing countries in particular, owing to its low immediate costs. On the other hand, landfilling is a matter of concern due to its generation of heavily polluted leachate. Landfill leachate becomes more refractory with time and is very difficult to treat using conventional biological processes. The aged refuse-based bioreactor/biofilter (ARB) has been shown to be a promising technology for the removal of various pollutants from landfill leachate and validates the principle of waste control by waste. Based on different environmental and operational factors, many researchers have reported remarkable pollutant removal efficiencies using ARB. This paper gives an overview of various types of ARBs used; their efficiencies; and certain factors like temperatures, loading rates, and aerobic/anaerobic conditions which affect the performance of ARBs in eliminating pollutants from leachate. Treating leachate by ARBs has been proved to be more cost-efficient, environment friendly, and simple to operate than other traditional biological techniques. Finally, future research and developments are also discussed. 相似文献
96.
Yen Kuan Ng Muhammad Ehsaan Sheryl Philip Mark M. Collery Clare Janoir Anne Collignon Stephen T. Cartman Nigel P. Minton 《PloS one》2013,8(2)
Sophisticated genetic tools to modify essential biological processes at the molecular level are pivotal in elucidating the molecular pathogenesis of Clostridium difficile, a major cause of healthcare associated disease. Here we have developed an efficient procedure for making precise alterations to the C. difficile genome by pyrE-based allelic exchange. The robustness and reliability of the method was demonstrated through the creation of in-frame deletions in three genes (spo0A, cwp84, and mtlD) in the non-epidemic strain 630Δerm and two genes (spo0A and cwp84) in the epidemic PCR Ribotype 027 strain, . The system is reliant on the initial creation of a pyrE deletion mutant, using Allele Coupled Exchange (ACE), that is auxotrophic for uracil and resistant to fluoroorotic acid (FOA). This enables the subsequent modification of target genes by allelic exchange using a heterologous pyrE allele from Clostridium sporogenes as a counter-/negative-selection marker in the presence of FOA. Following modification of the target gene, the strain created is rapidly returned to uracil prototrophy using ACE, allowing mutant phenotypes to be characterised in a PyrE proficient background. Crucially, wild-type copies of the inactivated gene may be introduced into the genome using ACE concomitant with correction of the pyrE allele. This allows complementation studies to be undertaken at an appropriate gene dosage, as opposed to the use of multicopy autonomous plasmids. The rapidity of the ‘correction’ method (5–7 days) makes pyrE
− strains attractive hosts for mutagenesis studies. R20291相似文献
97.
马加拉山国家公园自建立以来,在自然环境保护方面面临着一些问题。园内住民向来使用药用植物治疗各种疾病,长期依赖周围的植物资源提供食品、房舍、饲料、保健品和其他人文生活的需要。然而,工业化的兴起以及随之而来的人们生活方式的改变,使得利用当地植物作医药的情况不断减少。因此,有必要进行民族植物学研究,把本土植物的利用信息在丧失之前记录下来。调查结果表明,AsparagusadescendensRoxb.,BerberislyciumRoyle(柯杞小檗)和ViolacanescenceWal.exRoxb.只能少量采集,AcaciamodestaWal.,A.nilotica(L.)Delile(阿拉伯胶金合欢),BuxuspipilosaC.K.Schneid.和Dodonaeaviscosa(L.)Jacq.(车桑子)等作为薪材面临砍伐的压力。而GrewiaoptivaDrum.exBurret作为持续利用的饲料和制绳用的种类显示良好的前景 相似文献
98.
Wu B Decourt B Zabidi MA Wuethrich LT Kim WH Zhou Z MacIsaac K Suter DM 《Molecular biology of the cell》2008,19(11):4611-4627
Src family tyrosine kinases are important signaling enzymes in the neuronal growth cone, and they have been implicated in axon guidance; however, the detailed localization, trafficking, and cellular functions of Src kinases in live growth cones are unclear. Here, we cloned two novel Aplysia Src kinases, termed Src1 and Src2, and we show their association with both the plasma membrane and the microtubule cytoskeleton in the growth cone by live cell imaging, immunocytochemistry, and cell fractionation. Activated Src2 is enriched in filopodia tips. Interestingly, Src2-enhanced green fluorescent protein–positive endocytic vesicles and tubulovesicular structures undergo microtubule-mediated movements that are bidirectional in the central domain and mainly retrograde in the peripheral domain. To further test the role of microtubules in Src trafficking in the growth cone, microtubules were depleted with either nocodazole or vinblastine treatment, resulting in an increase in Src2 plasma membrane levels in all growth cone domains. Our data suggest that microtubules regulate the steady-state level of active Src at the plasma membrane by mediating retrograde recycling of endocytosed Src. Expression of constitutively active Src2 results in longer filopodia that protrude from smaller growth cones, implicating Src2 in controlling the size of filopodia and lamellipodia. 相似文献
99.
Shah Y Iqbal Z Ahmad L Khan A Khan MI Nazir S Nasir F 《Journal of chromatography. B, Analytical technologies in the biomedical and life sciences》2011,879(9-10):557-563
A novel, precise, accurate and rapid isocratic reversed-phase high performance liquid chromatographic/ultraviolet (RP-HPLC/UV) method was developed, optimized and validated for simultaneous determination of rosuvastatin and atorvastatin in human serum using naproxen sodium as an internal standard. Effect of different experimental parameters and various particulate columns on the analysis of these analytes was evaluated. The method showed adequate separation for rosuvastatin and atorvastatin and best resolution was achieved with Brownlee analytical C18 column (150×4.6 mm, 5 μm) using methanol-water (68:32, v/v; pH adjusted to 3.0 with trifluoroacetic acid) as a mobile phase at a flow rate of 1.5 ml/min and wavelength of 241 nm. The calibration curves were linear over the concentration ranges of 2.0-256 ng/ml for rosuvastatin and 3.0-384 ng/ml for atorvastatin. The lower limit of detection (LLOD) and lower limit of quantification (LLOQ) for rosuvastatin were 0.6 and 2.0 ng/ml while for atorvastatin were 1.0 and 3.0ng/ml, respectively. All the analytes were separated in less than 7.0 min. The proposed method could be applied for routine laboratory analysis of rosuvastatin and atorvastatin in human serum samples, pharmaceutical formulations, drug-drug interaction studies and pharmacokinetics studies. 相似文献
100.
Two DNA fingerprinting techniques, random amplified polymorphic DNA (RAPD) and inter-retrotransposon amplified polymorphism
(IRAP), were used to characterize somaclonal variants of banana. IRAP primers were designed on the basis of repetitive and
genome-wide dispersed long terminal repeat (LTR) retrotransposon families for assessing the somaclonal variation in 2Musa clones resistant and susceptible toFusarium oxysporum f. sp.cubense race 4. RAPD markers successfully detected genetic variation within and between individuals of the clones. IRAP makers amplified
either by a single primer or a combination of primers based on LTR orientation successfully amplified different retrotransposons
dispersed in theMusa genome and detected new events of insertions. RAPD markers proved more polymorphic than IRAP markers. Somaclonal variation
seems to be the result of numerous indels occurring genome-wide accompanied by the activation of retroelements, as a result
of stress caused by micropropagation. It is concluded that characterization of the somaclonal variants requires more than
one DNA marker system to detect variation in diverse components of the genome. 相似文献