A metagenomic analysis of soil bacteria extends the diversity of quorum-quenching lactonases

A metagenomic library of 10 121 clones, generated from bacteria inhabiting a pasture soil from France, was screened for the presence of fosmids conferring either N -acylhomoserine lactone (NAHL) synthesis or NAHL degradation ability upon their Escherichia coli host. No clone producing NAHLs was identified whereas one, containing a 31 972 bp insert in fosmid p2H8, allowed NAHL degradation. This led to the cloning and identification of a gene, qlcA , encoding an NAHL-lactonase activity, as judged by lactone-ring closure and HPLC/MS analyses of NAHL degradation products. The qlcA gene efficiently quenched quorum-sensing regulated pathogenic functions when expressed in Pectobacterium carotovorum . The QlcA peptide belongs to the family of zinc-dependent metallohydrolases and appears to be distantly related to other NAHL-lactonases discovered in Agrobacterium , Bacillus , Photorhabdus and Rhizobium . In-silico analysis of the metagenomic insert revealed the occurrence of 20 orf , with a constant GC% and codon usage, suggesting a unique bacterial origin. Nine out of these 20 orf were homologous to genes encoding biosynthesis of arginine; they were clustered with an unusual succession argFJADBCRGH . The fosmid p2H8 is able to complement the argA , argB and argC mutants in E. coli . Phylogenetic analysis showed that 9 orf out of 20 were related to sequences from members of the Acidobacteria , supporting the hypothesis that the analysed insert might be originated from an organism related to this phylum.     

Tooth loss, denture wearing and associated factors among an elderly institutionalised Brazilian population

Objective: This cross‐sectional study assessed the prevalence and extent of tooth loss as well as denture wear and associated factors in institutionalised elderly in Brazil. Background: There is scarcity of research in Brazil concerning geriatric oral health issues. Material and methods: A sample of 335 individuals over 60 years of age, representative of the institutionalised elderly from Belo Horizonte, Brazil, were selected through a stratified sampling strategy. Data were collected from structured questionnaires, reviews of medical records and intra‐oral examinations. Results: Edentulousness was observed in 74.9% of the elderly and was related to age, years of study, income, length of institutionalisation, systemic diseases and mini‐mental score. Among the dentate subjects, 17.9% possessed 20 or more teeth. Approximately half the edentulous elderly (42.6%) and most of the partially dentate subjects (66.7%) did not wear dentures. The multivariate analysis showed that subjects that wear dentures were more likely to be female, possess higher incomes, be more functionally independent and married. Furthermore, the odds of wearing dentures among the elderly who had lost 13–32 teeth were 9.11 times higher than those who had lost up to 12 teeth. Conclusion: Tooth loss is highly prevalent in this institutionalised Brazilian population, and the prevalence of denture wear is low. The extent of tooth loss, income, functional status and marital status are important predictors for denture wear. The development of an oral health programme for these individuals should assist in their rehabilitation needs and promote in‐home care or safe transport for the elderly to a health care location.     

Ferric species equilibrium of the giant extracellular hemoglobin of Glossoscolex paulistus in alkaline medium: HALS hemichrome as a precursor of pentacoordinate species

The present work is focused on the complex ferric heme species equilibrium of the giant extracellular hemoglobin from Glossoscolex paulistus (HbGp) in alkaline medium. EPR, UV-vis and CD spectroscopies were used in order to characterize the ferric heme species formed as a consequence of the medium alkalization as well as the oligomeric changes occurring simultaneously with heme transitions. EPR experiments allowed us to characterize the different hemichrome species in equilibrium, illustrating the small difference in spin state of this species and the complexity of the equilibira involving hemoglobin ferric species. The results emphasize the importance of the alkaline oligomeric dissociation, which is decisive to promote the heme ferric species transition as function of the increase in water accessibility to the heme pocket. In fact, the oligomeric dissociation in alkaline medium is a consequence of the intense electrostatic repulsion between anionic charges on the protein surface, since the isoelectric point (pI) of this hemoglobin is acid. This explains the more drastic aquomet-hemichrome-pentacoordinate species transition in alkaline medium as compared with the acid medium. However, these heme species transitions are not completed, i.e., the appearance of new species does not mean the total consumption of the precursor species. This equilibrium complexity is associated to the effective influence of oligomeric arrangement of this whole hemoglobin, which present 144 molecular subunits. The acid pI is probably an important factor to the structure-activity relationship of the giant extracellular hemoglobins.     

Spectral, electrochemical, and catalytic properties of a homologous series of manganese porphyrins as cytochrome P450 model: the effect of the degree of beta-bromination

A homologous series of β-brominated porphyrins derived from meso-tetrakis(4-carbomethoxyphenyl)porphyrinatomanganese(III) chloride, i.e., Mn(III)(Br_xTCMPP)Cl (x = 0, 2, 4, 6, and 8), was prepared and investigated as cytochrome P450 models. Hydroxylations of cyclohexane by iodosylbenzene (PhIO) and iodobenzene diacetate (PhI(OAc)₂) in the presence or absence of water were carried out as P450 model reactions. The influence of the degree of β-bromination of the macrocycle on the UV-vis spectra, the Mn(III)/Mn(II) reduction potential, and the catalytic properties of the Mn(III)(Br_xTCMPP)Cl (x = 0, 2, 4, 6, and 8) series were examined. The catalytic efficiency does not correlate with the Mn(III)/Mn(II) reduction potential and shows a bell-shaped behavior, where the best results are achieved with the hexabrominated complex. Better hydroxylation yields were achieved by using PhI(OAc)₂ as oxygen donor, but at expenses of catalyst recovery; addition of water to this system resulted in a increase in the reaction rate. Recycling of the more oxidatively robust complexes Mn(III)(Br₆TCMPP)Cl and Mn(III)(Br₈TCMPP)Cl is feasible when using PhIO as oxygen donor. Selectivity and UV-vis data suggested that hydroxylation by both PhIO and PhI(OAc)₂ share closely related active species and mechanism. We also show that the Mn(III)/Mn(II) reduction potentials are inappropriate predictors of P450-type activity of Mn porphyrin-catalyzed oxidations.     

Discrimination of conspecific faecal chemicals and spatial decisions in juvenile Iberian rock lizards (<Emphasis Type="Italic">Lacerta monticola</Emphasis>)

Faeces play a role in intraspecific chemical communication in many vertebrates, including lizards. Here, we hypothesised that juvenile Iberian rock lizards (Lacerta (=Iberolacerta) monticola) use substrate-borne conspecific faecal chemicals to assess the social environment and base their spatial decisions. To test this hypothesis, we prepared chemical stimuli by dissolving faeces in an organic solvent (dichloromethane, DCM) and conducted chemosensory trials where we quantified latency to the first tongue flick (TF) and TF rates when young captive-borne juveniles were placed in an arena compartment whose substrate was labelled by (1) a control (DCM), (2) their own faecal chemicals, (3) faecal chemicals of another juvenile, (4) faecal chemicals of an adult female or (5) faecal chemicals of an adult male. Following TF observations, we removed a partition that separated the labelled compartment from a chemically unlabelled one, and recorded for 5 min when juveniles first crossed to the unlabelled compartment and total time spent in the labelled compartment. Each juvenile was tested with all stimuli in a randomised order. In addition, juveniles belonged to different families and were unrelated to and unfamiliar with faeces donors. Taken together, TF and spatial responses toward stimuli indicate that juveniles discriminated between faecal chemicals of conspecific juveniles, adult females and males, and that they avoided remaining in substrates labelled by adult male faecal chemicals. We suggest that juveniles assess the social environment based on conspecific faecal chemicals thus avoiding aggression and cannibalistic risks undertaken from encounters with adult males.     

The outer membrane protein TolC from Sinorhizobium meliloti affects protein secretion, polysaccharide biosynthesis, antimicrobial resistance, and symbiosis

Sinorhizobium meliloti is capable of establishing a symbiotic nitrogen fixation relationship with Medicago sativa. During this process, it must cope with diverse environments and has evolved different types of transport systems that help its propagation in the plant roots. TolC protein family members are the outer-membrane components of several transport systems involved in the export of diverse molecules, playing an important role in bacterial survival. In this work, we have characterized the protein TolC from S. meliloti 2011. An insertional mutation in the tolC gene strongly affected the resistance phenotype to antimicrobial agents and induced higher susceptibility to osmotic and oxidative stresses. Immunodetection experiments and comparison of the extracellular proteins present in the supernatant of the wild-type versus tolC mutant strains showed that the calcium-binding protein ExpE1, the endoglycanase ExsH, and the product of open reading frame SMc04171, a putative hemolysin-type calcium-binding protein, are secreted by a TolC-dependent secretion system. In the absence of TolC, neither succinoglycan nor galactoglucan were detected in the culture supernatant. Moreover, S. meliloti tolC mutant induced a reduced number of nonfixing nitrogen nodules in M. sativa roots. Taken together, our results confirm the importance of TolC in protein secretion, exopolysaccharide biosynthesis, antimicrobials resistance, and symbiosis.     

Novel lipoarabinomannan-like lipoglycan (CdiLAM) contributes to the adherence of <Emphasis Type="Italic">Corynebacterium diphtheriae</Emphasis> to epithelial cells

The genus Corynebacterium is part of the phylogenetic group nocardioform actinomycetes. Members of this group have a characteristic cell envelope structure composed primarily of branched long-chain lipids, termed mycolic acids, and a rich number of lipoglycans such as lipoarabinomanans (LAM) and lipomannans. In this study, we identified a novel LAM variant isolated from Corynebacterium diphtheriae named CdiLAM. The key structural features of CdiLAM are a linear α-1→6-mannan with side chains containing 2-linked α-D-Manp and 4-linked α-D-Araf residues. The polysaccharide backbone is linked to a phosphatidylinositol anchor. In contrast to the LAMs of other members of actinomycetales, CdiLAM presents an unusual substitution at position 4 of α-1→6-mannan backbone by α-D-Araf. Unlike the non-fimbrial adhesin 62–72p, CdiLAM did not function as a hemagglutinin to human red blood cells. Experimental evidences pointed to CdiLAM as an adhesin of C. diphtheriae to human respiratory epithelial cells, thereby, contributing to the pathogenesis of diphtheria.     

Morphological changes and EGF expression in the granular convoluted tubule cells of submandibular glands of Trypanosoma cruzi infected rats

We have previously demonstrated in rats that Chagas' disease affects the salivary glands, by promoting an enlargement of the submandibular gland. In order to further investigate possible functional alterations on infected submandibular glands, the objective of the present study was to analyze epidermal growth factor (EGF) expression on rat submandibular glands during Trypanosoma cruzi infection. Results demonstrated that infected rats presented lower levels of testosterone, and morphological changes in the granular convoluted tubule (GCT) cells of the submandibular glands, along with acinar enlargement and delayed ductal maturation at the developing granular ducts. Immunohistochemistry analysis additionally showed that only few cells immunolabelled with anti-EGF on infected rats during the acute phase of Chagas' disease, while after 64 and 90 days (chronic phase) of infection, EGF expression was similar to non-infected rats. The present findings suggest that at the acute phase of Chagas' disease, lower levels of testosterone may lead to a delayed maturation of GCT, which positively correlates with decreased EGF production by submandibular glands cells.     

Apoptotic mimicry by an obligate intracellular parasite downregulates macrophage microbicidal activity.

Programmed cell death by apoptosis of unnecessary or potentially harmful cells is clearly beneficial to multicellular organisms. Proper functioning of such a program demands that the removal of dying cells proceed without an inflammatory reaction. Phosphatidylserine (PS) is one of the ligands displayed by apoptotic cells that participates in their noninflammatory removal when recognized by neighboring phagocytes. PS ligation induces the release of transforming growth factor-beta (TGF-beta), an antiinflammatory cytokine that mediates the suppression of macrophage-mediated inflammation. In Hydra vulgaris, an organism that stands at the base of metazoan evolution, the selective advantage provided by apoptosis lies in the fact that Hydra can survive recycling apoptotic cells by phagocytosis. In unicellular organisms, it has been proposed that altruistic death benefits clonal populations of yeasts and trypanosomatids. Now we show that advantageous features of the apoptotic process can operate without death as the necessary outcome. Leishmania spp are able to evade the killing activity of phagocytes and establish themselves as obligate intracellular parasites. Amastigotes, responsible for disease propagation, similar to apoptotic cells, inhibit macrophage activity by exposing PS. Exposed PS participates in amastigote internalization. Recognition of this moiety by macrophages induces TGF-beta secretion and IL-10 synthesis, inhibits NO production, and increases susceptibility to intracellular leishmanial growth.