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91.
Conservation and divergence of axon guidance mechanisms. 总被引:8,自引:0,他引:8
Analysis of axon guidance mechanisms in vertebrates, Caenorhabditis elegans, and Drosophila melanogaster has led to the identification of several signaling pathways, many of which are strikingly conserved in function. Recent studies indicate that several axon guidance mechanisms are highly conserved in all animals, whereas others, though still conserved in a general sense, show strong evolutionary divergence at a detailed mechanistic level. 相似文献
92.
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94.
Rex L. Chisholm 《Cell》2021,184(8):1964-1965
95.
In the classic spatially implicit formulation of Hubbell's neutral theory of biodiversity a local community receives immigrants from a metacommunity operating on a relatively slow timescale, and dispersal into the local community is governed by an immigration parameter m . A current problem with neutral theory is that m lacks a clear biological interpretation. Here, we derive analytical expressions that relate the immigration parameter m to the geometry of the plot defining the local community and the parameters of a dispersal kernel. Our results facilitate more rigorous and extensive tests of the neutral theory: we conduct a test of neutral theory by comparing estimates of m derived from fits to empirical species abundance distributions to those derived from dispersal kernels and find acceptable correspondence; and we generate a new prediction of neutral theory by investigating how the shapes of species abundance distributions change theoretically as the spatial scale of observation changes. We also discuss how our main analytical results can be used to assess the error in the mean-field approximations associated with spatially implicit formulations of neutral theory. 相似文献
96.
Shiva Torabian Mehrdad Ranaei Saeid Pourmanafi Laurie Chisholm 《Contemporary Problems of Ecology》2018,11(6):687-696
Species distribution in space is important in habitat conservation and biodiversity protection, so gaining knowledge about species range would be worthwhile to rescue endangered species and plan conservation policy. This study evaluates and compares the performance of an array of Species Distribution Models (SDMs), namely RF, SVM, MaxEnt, GLMNET, and MARS, in predicting rare sand cat distribution across a large unprotected sand dune area in central Iran. Due to absence of reliable data and difficulties in recording the species itself, the SDMs were challenged by limited data including 55 absence (background) and 40 presence points as well as nine climatic and geological parameters that influence on species distribution, including humidity, maximum, minimum and mean temperature, precipitation, amount of sunshine, ground water level, aspect, and DEM. Moreover, each model was replicated 20 times and the statistics including TSS, AUC, COR and Deviance were computed. Then, based on computed statistics, the model performances were evaluated by TUKEY and ANOVA. Finally, ensemble map was obtained by weighted approach using AUC. The results of this study showed that complex machine learning methods, like SVM, RF, and MaxEnt are more outperformed to predict the distribution of rare species. 相似文献
97.
Jennifer F. Knight Vanessa Y.C. Sung Elena Kuzmin Amber L. Couzens Danielle A. de Verteuil Colin D.H. Ratcliffe Paula P. Coelho Radia M. Johnson Payman Samavarchi-Tehrani Tina Gruosso Harvey W. Smith Wontae Lee Sadiq M. Saleh Dongmei Zuo Hong Zhao Marie-Christine Guiot Ryan R. Davis Jeffrey P. Gregg Morag Park 《Cell reports》2018,22(12):3191-3205
98.
David E. Burmaster Sallie W. Chisholm 《Journal of experimental marine biology and ecology》1979,39(2):187-202
Two methods for measuring phosphate uptake by phosphate-limited continuous cultures of Monochrysis lutheri Droop are found to yield comparable results. Data from both isotopic tracer (33P) and disappearance experiments strongly support a Michaelis- Menten-type hyperbolic relationship between instantaneous uptake rate and ambient phosphate concentration. The data show no systematic linear trend in either the maximum uptake rate per cell or its associated half saturation constant with pre-conditioning steady state growth rate; a weak non-linear trend with pre-conditioning may, however, be present in the maximum uptake rate with an apparent maximum at intermediate growth rates. 相似文献
99.
100.
Sullivan MB Coleman ML Quinlivan V Rosenkrantz JE Defrancesco AS Tan G Fu R Lee JA Waterbury JB Bielawski JP Chisholm SW 《Environmental microbiology》2008,10(10):2810-2823
Oceanic phages are critical components of the global ecosystem, where they play a role in microbial mortality and evolution. Our understanding of phage diversity is greatly limited by the lack of useful genetic diversity measures. Previous studies, focusing on myophages that infect the marine cyanobacterium Synechococcus, have used the coliphage T4 portal-protein-encoding homologue, gene 20 (g20), as a diversity marker. These studies revealed 10 sequence clusters, 9 oceanic and 1 freshwater, where only 3 contained cultured representatives. We sequenced g20 from 38 marine myophages isolated using a diversity of Synechococcus and Prochlorococcus hosts to see if any would fall into the clusters that lacked cultured representatives. On the contrary, all fell into the three clusters that already contained sequences from cultured phages. Further, there was no obvious relationship between host of isolation, or host range, and g20 sequence similarity. We next expanded our analyses to all available g20 sequences (769 sequences), which include PCR amplicons from wild uncultured phages, non-PCR amplified sequences identified in the Global Ocean Survey (GOS) metagenomic database, as well as sequences from cultured phages, to evaluate the relationship between g20 sequence clusters and habitat features from which the phage sequences were isolated. Even in this meta-data set, very few sequences fell into the sequence clusters without cultured representatives, suggesting that the latter are very rare, or sequencing artefacts. In contrast, sequences most similar to the culture-containing clusters, the freshwater cluster and two novel clusters, were more highly represented, with one particular culture-containing cluster representing the dominant g20 genotype in the unamplified GOS sequence data. Finally, while some g20 sequences were non-randomly distributed with respect to habitat, there were always numerous exceptions to general patterns, indicating that phage portal proteins are not good predictors of a phage's host or the habitat in which a particular phage may thrive. 相似文献