Population dynamics, disturbance, and pattern evolution: identifying the fundamental scales of organization in a model ecosystem

We used auto- and cross-correlation analysis and Ripley's K-function analysis to analyze spatiotemporal pattern evolution in a spatially explicit simulation model of a semiarid shrubland (Karoo, South Africa) and to determine the impact of small-scale disturbances on system dynamics. Without disturnities bance, local dynamics were driven by a pattern of cyclic succession, where 'colonizer' and 'successor' species alternately replaced each other. This results in a strong pattern of negative correlation in the temporal distribution of colonizer and successor species. As disturbance rates were increased, the relationship shifted from being negatively correlated in time to being positively correlated-the dynamics became decoupled from the ecologically driven cyclic succession and were increasingly influenced by abiotic factors (e.g., rainfall events). Further analysis of the spatial relationships among colonizer and successor species showed that, without disturbance, periods of attraction and repulsion between colonizer and successor species alternate cyclically at intermediate spatial scales. This was due to the spatial 'memory' embedded in the system through the process of cyclic succession. With the addition of disturbance, this pattern breaks down, although there is some indication of increasing ecological organization at broader spatial scales. We suggest that many of the insights that can be gained through spatially explicit models will only be obtained through a direct analysis of the spatial patterns produced.     

Wooded habitat edges as refugia from microtine herbivory in tallgrass prairies

Meadow voles, Microtus pennsylvanicus , affect the species composition, distribution, and succession of plants in grassland ecosystems, but the effects of voles on herbaceous plants when grasslands are bordered by wooded edges is not known. We investigated the impact of wooded edges on vole distribution and herbivory of relatively palatable and unpalatable native prairie plant species by studying five reconstructed tallgrass prairies with wooded edges in central Iowa. A 50×50 m trapping grid at each site was established to determine the proportion of voles captured at various distances from the edge. We found that meadow voles were less abundant at wooded edges and, in general, increased in number toward the prairie interior. Seedlings of purple prairie clover ( Dalea purpurea ) and Illinois bundleflower ( Desmanthus illinoensis ), a relatively palatable and unpalatable species, respectively, were transplanted onto simulated gopher mounds 2, 5, 10, 20 and 30 m from the edge. The number of plants grazed per species per mound was determined 1 week and 4 weeks after planting. The amount of herbivory on both species was significantly different by distance, with fewer plants eaten 2 m from the edge. Interestingly, the amount of herbivory on relatively unpalatable plants did not differ from more palatable plants. Herbivory on both plant species also varied by site, such that sites with lower vole density tended to have lower amounts of herbivory. These results indicate that wooded edges do have an effect on meadow vole distribution and native prairie seedling herbivory. Because voles avoid wooded edges, seedlings of any species may experience a small refuge from herbivory along wooded edges.     

Constitutive Type VI Secretion System Expression Gives Vibrio cholerae Intra- and Interspecific Competitive Advantages

The type VI secretion system (T6SS) mediates protein translocation across the cell membrane of Gram-negative bacteria, including Vibrio cholerae – the causative agent of cholera. All V. cholerae strains examined to date harbor gene clusters encoding a T6SS. Structural similarity and sequence homology between components of the T6SS and the T4 bacteriophage cell-puncturing device suggest that the T6SS functions as a contractile molecular syringe to inject effector molecules into prokaryotic and eukaryotic target cells. Regulation of the T6SS is critical. A subset of V. cholerae strains, including the clinical O37 serogroup strain V52, express T6SS constitutively. In contrast, pandemic strains impose tight control that can be genetically disrupted: mutations in the quorum sensing gene luxO and the newly described regulator gene tsrA lead to constitutive T6SS expression in the El Tor strain C6706. In this report, we examined environmental V. cholerae isolates from the Rio Grande with regard to T6SS regulation. Rough V. cholerae lacking O-antigen carried a nonsense mutation in the gene encoding the global T6SS regulator VasH and did not display virulent behavior towards Escherichia coli and other environmental bacteria. In contrast, smooth V. cholerae strains engaged constitutively in type VI-mediated secretion and displayed virulence towards prokaryotes (E. coli and other environmental bacteria) and a eukaryote (the social amoeba Dictyostelium discoideum). Furthermore, smooth V. cholerae strains were able to outcompete each other in a T6SS-dependent manner. The work presented here suggests that constitutive T6SS expression provides V. cholerae with an advantage in intraspecific and interspecific competition.     

Effects of jasmonic Acid on embryo-specific processes in brassica and linum oilseeds

A number of effects on embryogenesis of the putative phytohormone jasmonic acid (JA), and its methyl ester (MeJA), were investigated in two oilseed plants, repeseed (Brassica napus) and flax (Linum usitatissimum). Results from treatments with JA and MeJA were compared with those of a known effector of several aspects of embryogenesis, abscisic acid (ABA). Jasmonic acid was identified by gas chromatography-mass spectrometry as a naturally occurring substance in both plant species during embryo development. Both JA and MeJA can prevent precocious germination of B. napus microspore embryos and of cultured zygotic embryos of both species at an exogenous concentration of >1 micromolar. This dose-response was comparable with results obtained with ABA. Inhibitory effects were also observed on seed germination with all three growth regulators in rapeseed and flax. A number of molecular aspects of embryogenesis were also investigated. Expression of the B. napus storage protein genes (napin and cruciferin) was induced in both microspore embryos and zygotic embryos by the addition of 10 micromolar JA. The level of napin and cruciferin mRNA detected was similar to that observed when 10 micromolar ABA was applied to these embryos. For MeJA only slight increases in napin or cruciferin mRNA were observed at concentrations of 30 micromolar. Several oilbody-associated proteins were found to accumulate when the embryos were incubated with either JA or ABA in both species. The MeJA had little effect on oilbody protein synthesis. The implications of JA acting as a natural regulator of gene expression in zygotic embryogenesis are discussed.     

Intake, digestibility, rumen fermentation and performance of beef cattle fed diets based on whole-crop wheat or barley harvested at two cutting heights relative to maize silage or ad libitum concentrates

This experiment aimed to quantify the relative intake, digestibility, rumen fermentation, performance and carcass characteristics of beef cattle fed diets based on good quality whole-crop wheat and barley silages, each harvested at two cutting heights, and to rank these relative to good quality maize silage and an ad libitum concentrates-based diet. Ninety beef steers, initial live-weight 438 ± 31.0 kg, were allocated to one of the following dietary treatments in a randomised complete block design: maize silage (MS), whole-crop wheat harvested at a normal cutting height (WCW) (stubble height 0.12 m) or an elevated cutting height (HCW) (stubble height 0.29 m), whole-crop barley harvested at a normal cutting height (WCB) (stubble height 0.13 m) or an elevated cutting height (HCB) (stubble height 0.30 m), each being supplemented with 3 kg concentrates/head/day, and ad libitum concentrates (ALC) supplemented with 5 kg grass silage/head/day for the duration of the 160-day study. Mean dry matter (DM) of the maize silage, whole-crop wheat, head-cut wheat, whole-crop barley and head-cut barley was 301, 488, 520, 491 and 499 g/kg, respectively. There were no differences in total DM intake among treatments, or in rumen fermentation characteristics (except ammonia), or in DM digestibility among the forage-based treatments. Neutral detergent fibre digestibility was lower (P<0.05) for whole-crop wheat than head-cut barley, and starch digestibility was lower (P<0.05) for whole-crop barley and head-cut barley than maize silage. Steers fed ALC had a higher carcass gain (P<0.001) and carcass weight (P<0.05) than all other treatments, but there were no differences between any of the forage-based treatments. Steers fed MS had a better feed conversion efficiency (FCE) than those on WCW or WCB (P<0.05) but were similar to HCW and HCB. The FCE was better for ALC versus any of the other treatments, particularly compared to WCW or WCB (P<0.001). Subcutaneous fat from steers fed ALC was more yellow (P<0.01) than that from steers fed the other treatments. Neither intake nor performance were altered by raising the cutting height of cereals or by replacing whole-crop wheat by barley. However, head-cut cereals numerically favoured DM intake, carcass gain and feed conversion efficiency values nearer to that of maize than whole-crop cereal silages. Ad libitum concentrates supported superior levels of growth by steers compared to all other treatments.     

Photoaffinity labelling of isopenicillin N synthetase by laser-flash photolysis.

Isopenicillin N synthetase (IPNS) from Acremonium chrysogenum was photolabelled by laser-flash photolysis in the presence of a diazirinyl-containing substrate, 2-[3-(3-trifluoromethyl-3H-diazirin-3-yl)-phenoxy]acetyl-S- methyloxycarbonylsulphenyl-L-cysteinyl-D-valine (DCV). Labelling of IPNS by DCV is partially inhibited in the presence of an excess of L-alpha-aminoadipoyl-L-cysteinyl-D-valine (ACV), the natural substrate. In the absence of light, DCV is converted into the corresponding penicillin with comparable Km but significantly depressed Vmax relative to ACV. Selective incorporation of [14C]DCV into IPNS has been demonstrated by fluorography of IPNS analysed by SDS/polyacrylamide-gel electrophoresis. Scintillation counting of labelled IPNS purified on an ion-exchange f.p.l.c. column confirms this result. This methodology may be applicable for studies aimed at investigating the binding of substrates to IPNS.     

Radiation dose and second cancer risk in patients treated for cancer of the cervix

The risk of cancer associated with a broad range of organ doses was estimated in an international study of women with cervical cancer. Among 150,000 patients reported to one of 19 population-based cancer registries or treated in any of 20 oncology clinics, 4188 women with second cancers and 6880 matched controls were selected for detailed study. Radiation doses for selected organs were reconstructed for each patient on the basis of her original radiotherapy records. Very high doses, on the order of several hundred gray, were found to increase the risk of cancers of the bladder [relative risk (RR) = 4.0], rectum (RR = 1.8), vagina (RR = 2.7), and possibly bone (RR = 1.3), uterine corpus (RR = 1.3), cecum (RR = 1.5), and non-Hodgkin's lymphoma (RR = 2.5). For all female genital cancers taken together, a sharp dose-response gradient was observed, reaching fivefold for doses more than 150 Gy. Several gray increased the risk of stomach cancer (RR = 2.1) and leukemia (RR = 2.0). Although cancer of the pancreas was elevated, there was no evidence of a dose-dependent risk. Cancer of the kidney was significantly increased among 15-year survivors. A nonsignificant twofold risk of radiogenic thyroid cancer was observed following an average dose of only 0.11 Gy. Breast cancer was not increased overall, despite an average dose of 0.31 Gy and 953 cases available for evaluation (RR = 0.9); there was, however, a weak suggestion of a dose response among women whose ovaries had been surgically removed. Doses greater than 6 Gy to the ovaries reduced breast cancer risk by 44%. A significant deficit of ovarian cancer was observed within 5 years of radiotherapy; in contrast, a dose response was suggested among 10-year survivors. Radiation was not found to increase the overall risk of cancers of the small intestine, colon, ovary, vulva, connective tissue, breast, Hodgkin's disease, multiple myeloma, or chronic lymphocytic leukemia. For most cancers associated with radiation, risks were highest among long-term survivors and appeared concentrated among women irradiated at relatively younger ages.     

Simulated long-term vegetation response to alternative stocking strategies in savanna rangelands

Increasing cover by woody vegetation, prevalent in semiarid savanna rangelands throughout the world, is a degrading process attributed to the grazing impact as a major causal factor. We studied grazing effects on savanna vegetation dynamics under alternative stocking strategies with a spatially explicit grid-based simulation model grounded in Kalahari (southern Africa) ecology. Plant life histories were modeled for the three major life forms: perennial grasses, shrubs, annuals. We conducted simulation experiments over a range of livestock utilization intensities for three alternative scenarios of small scale grazing heterogeneity, and two alternative strategies: fixed stocking versus adaptive stocking tracking herbage production. Additionally, the impact of the duration of the management planning horizon was studied, by comparing community response and mean stocking rates after 20 and 50 years. Results confirmed a threshold behavior of shrub cover increase: at low, subcritical utilization intensity little change occurred; when utilization intensity exceeded a threshold, shrub cover increased drastically. For both stocking strategies, thresholds were highly sensitive to grazing heterogeneity. At a given critical utilization intensity, the long term effect of grazing depended on the level of grazing heterogeneity: whereas under low heterogeneity, shrub cover remained unchanged, a large increase occurred under highly heterogeneous grazing. Hence, information on spatial grazing heterogeneity is crucial for correct assessment of the impact of livestock grazing on vegetation dynamics, and thus for the assessment of management strategies. Except for the least heterogeneous grazing scenario, adaptive stocking allowed a more intensive utilization of the range without inflating the risk of shrub cover increase. A destabilizing feedback between rainfall and herbage utilization was identified as the major cause for the worse performance of fixed compared to adaptive stocking, which lacks this feedback. Given the usually high grazing heterogeneity in semiarid rangelands, adaptive stocking provides a management option for increasing herbage utilization and thus returns of livestock produce without increasing degradation risks.