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61.
62.
Cui F Ding A Li J Zhao C Li X Feng D Wang X Wang L Gao J Wang H 《Journal of genetics》2011,90(3):409-425
Kernel dimensions (KD) contribute greatly to thousand-kernel weight (TKW) in wheat. In the present study, quantitative trait loci (QTL) for TKW, kernel length (KL), kernel width (KW) and kernel diameter ratio (KDR) were detected by both conditional and unconditional QTL mapping methods. Two related F(8:9) recombinant inbred line (RIL) populations, comprising 485 and 229 lines, respectively, were used in this study, and the trait phenotypes were evaluated in four environments. Unconditional QTL mapping analysis detected 77 additive QTL for four traits in two populations. Of these, 24 QTL were verified in at least three trials, and five of them were major QTL, thus being of great value for marker assisted selection in breeding programmes. Conditional QTL mapping analysis, compared with unconditional QTL mapping analysis, resulted in reduction in the number of QTL for TKW due to the elimination of TKW variations caused by its conditional traits; based on which we first dissected genetic control system involved in the synthetic process between TKW and KD at an individual QTL level. Results indicated that, at the QTL level, KW had the strongest influence on TKW, followed by KL, and KDR had the lowest level contribution to TKW. In addition, the present study proved that it is not all-inclusive to determine genetic relationships of a pairwise QTL for two related/causal traits based on whether they were co-located. Thus, conditional QTL mapping method should be used to evaluate possible genetic relationships of two related/causal traits. 相似文献
63.
Carmen Lai Hugo M Horlings Marc J van de Vijver Eric H van Beers Petra M Nederlof Lodewyk FA Wessels Marcel JT Reinders 《BMC bioinformatics》2007,8(1):422
Background
Array comparative genome hybridization (aCGH) provides information about genomic aberrations. Alterations in the DNA copy number may cause the cell to malfunction, leading to cancer. Therefore, the identification of DNA amplifications or deletions across tumors may reveal key genes involved in cancer and improve our understanding of the underlying biological processes associated with the disease. 相似文献64.
目的:制备链亲和素标记的人白细胞介素-2(SA-hIL2)融合蛋白,并研究其生物学功能。方法:构建SA-L-IL2-pET24重组表达质粒,在大肠杆菌中表达SA-hIL2融合蛋白,对表达的SA-hIL2融合蛋白采用镍金属螯合(Ni-NTA)层析柱进行纯化,透析复性。CCK-8法检测SA-hIL2融合蛋白对PHA刺激的人外周血淋巴细胞的增值活性,流式细胞仪分析SA-hIL2融合蛋白对生物素化的B16.F10肿瘤细胞表面锚定修饰效率。结果:SA-hIL2在大肠杆菌中实现了高效表达,约占菌体总蛋白的20%,制备的SA-hIL2融合蛋白纯度达到95%,并具有双重活性,即hIL-2促进PHA刺激的人外周血淋巴细胞的增值活性和SA介导的高效结合至已生物素化的B16.F10肿瘤细胞表面的功能(表面锚定修饰效率约95%)。结论:研制的SA-hIL2融合蛋白具有双重活性,可为研制表面修饰的新型肿瘤细胞疫苗提供基础。 相似文献
65.
We investigated development of cortical ciliature in Stylonychia mytilus during starvation-induced physiological reorganization, and during regeneration following amputation of the anterior part of the cell. Cortical reorganization in the two processes is generally similar. The posterior part of the adoral zone of membranelles is resorbed and replaced with newly assembled membranelles. The pre-existing set of ventral cirri and dorsal bristles is entirely resorbed and replaced with new ones. Regenerants exhibit posterior displacement of the frontal-ventral-transverse cirri primordium and the undulating membrane primordium, and recruit basal bodies from ectopic locations for the development of these ciliature. This illustrates flexibility in the initiation site of ciliary primordia, and opportunism in utilizing building blocks. Such morphogenetic versatility of hypotrichs provides the basis for the operation of a global control of pattern formation, which governs cortical reorganization in dividers, and additionally, in the absence of the prerequisites for binary fission, alternative modes of cortical development such as physiological reorganization or regeneration. These considerations suggest that the three processes are homologous and that physiological reorganization and regeneration have evolved from binary fission. In physiological reorganization and regeneration, the micro- and macronuclei reorganize to resemble that in binary fission; these nuclear events are considered evolutionary relics of the nuclear development of binary fission. Tetrahymena also exhibits such morphogenetic flexibility; stomatogenesis is under global control, so that asexual cells can replace its oral apparatus without undergoing binary fission. Paramecium , on the other hand, adopts a more rigid strategy in relying heavily on pre-existing structures for morphogenetic cues; this could have imposed constraints in the exploration of alternative modes of asexual development. 相似文献
66.
Mitochondrial DNA sequence variation in the spruce budworm species complex (Choristoneura: Lepidoptera) 总被引:5,自引:0,他引:5
A combination of polymerase-chain-reaction amplification and automated DNA
sequencing was used to survey variation in a species complex of pest
insects, the spruce budworms (Choristoneura fumiferana species group), and
an outgroup species, C. rosaceana. We sequenced an mtDNA region of 1,573 bp
that extends from the middle of cytochrome oxidase subunit I (COI) through
tRNA leucine (UUR) to the end of cytochrome oxidase subunit II. In
addition, we examined levels of intraspecific variation within a 470-bp
region of the COI gene. Choristoneura fumiferana clearly represented the
oldest lineage within its species group, with 2.7%-2.9% sequence divergence
from the other species. In contrast, the four remaining species (C. pinus,
C. biennis, C. occidentalis, and C. orae) had closely related or identical
mtDNA, with < 1% divergence among most of their haplotypes. Despite its
older lineage and widespread geographic distribution, C. fumiferana showed
significantly lower intraspecific genetic diversity than did C.
occidentalis. Choristoneura orae shared haplotypes with C. occidentalis and
C. biennis, and species-level separation of these three species was not
supported. Two divergent, uncommon haplotypes were also found in C.
occidentalis and C. biennis. The divergent haplotype in C. biennis had an
unusually high number of inferred amino acid replacements, suggesting
selective differences between mitochondrial DNA haplotypes.
Transition:transversion ratios in Choristoneura paralleled those found in
Drosophila; transition:transversion ratios were highest in closely related
sequences but decreased with increasing sequence divergence. Nucleotide
composition showed an A+T bias that was near the high end of the range
known for insects. This work illustrates the potential utility of direct
DNA sequencing in assessing population structures, species limits, and
phylogenetic relationships among organisms that have not previously been
subjected to DNA analysis.
相似文献
67.
Secretion of a human collagen alpha1(I) chain fragment was achieved in Hansenula polymorpha using the native alpha1(I) procollagen secretory signal sequence. The N-terminal propeptide in the fragment was cleaved off during secretion, yielding the N-terminus of mature alpha1(I) collagen. In Pichia pastoris transformants, the expression of the fragment could be detected on RNA-level, but the product could not be determined extracellularly. After fusion of the fragment with a myc-HIS6 epitope, the intact product was found intracellularly. The difference in the extracellular level of the protein between the two expression hosts is most likely caused by difference in secretion efficiency. 相似文献
68.
Conditional and unconditional QTL mapping of drought-tolerance-related traits of wheat seedling using two related RIL populations 总被引:1,自引:0,他引:1
HONG ZHANG FA CUI LIN WANG JUN LI ANMING DING CHUNHUA ZHAO YINGUANG BAO QIUPING YANG HONGGANG WANG 《Journal of genetics》2013,92(2):213-231
For discovering the quantitative trait loci (QTLs) contributing to early seedling growth and drought tolerance during germination, conditional and unconditional analyses of 12 traits of wheat seedlings: coleoptile length, seedling height, longest root length, root number, seedling fresh weight, stem and leaves fresh weight, root fresh weight, seedling dry weight, stem and leaves dry weight, root dry weight, root to shoot fresh weight ratio, root-to-shoot dry weight ratio, were conducted under two water conditions using two F8:9 recombinant inbred line (RIL) populations. The results of unconditional analysis are as follows: 88 QTLs accounting for 3.33–77.01% of the phenotypic variations were detected on chromosomes 1A, 1B, 1D, 2A, 2B, 2D, 3A, 3B, 4A, 4B, 4D, 5A, 5B, 5D, 6A, 6B, 6D, 7A, 7B and 7D. Among these QTLs, 19 were main-effect QTLs with a contribution rate greater than 10%. The results of the conditional QTL analysis of 12 traits under osmotic stress on normal water conditions were as follows: altogether 22 QTLs concerned with drought tolerance were detected on chromosomes 1B, 2A, 2B, 3B, 4A, 5D, 6A, 6D, 7B, and 7D. Of these QTLs, six were main-effect QTLs. These 22 QTLs were all special loci directly concerned with drought tolerance and most of them could not be detected by unconditional analysis. The finding of these QTLs has an important significance for fine-mapping technique, map-based cloning, and molecular marker-assisted selection of early seedling traits, such as growth and drought tolerance. 相似文献
69.
Talita?FA?Ribas Luis?RR?Rodrigues Cleusa?Y?Nagamachi Anderson?JB?Gomes Thayse?CM?Benathar Patricia?CM?O’Brien Fengtang?Yang Malcolm?A?Ferguson-Smith Julio?C?PieczarkaEmail author 《BMC genetics》2013,14(1):119
Background
The genus Micronycteris is a diverse group of phyllostomid bats currently comprising 11 species, with diploid number (2n) ranging from 26 to 40 chromosomes. The karyotypic relationships within Micronycteris and between Micronycteris and other phyllostomids remain poorly understood. The karyotype of Micronycteris hirsuta is of particular interest: three different diploid numbers were reported for this species in South and Central Americas with 2n?=?26, 28 and 30 chromosomes. Although current evidence suggests some geographic differentiation among populations of M. hirsuta based on chromosomal, morphological, and nuclear and mitochondrial DNA markers, the recognition of new species or subspecies has been avoided due to the need for additional data, mainly chromosomal data.Results
We describe two new cytotypes for Micronycteris hirsuta (MHI) (2n?=?26 and 25, NF?=?32), whose differences in diploid number are interpreted as the products of Robertsonian rearrangements. C-banding revealed a small amount of constitutive heterochromatin at the centromere and the NOR was located in the interstitial portion of the short arm of a second pair, confirmed by FISH. Telomeric probes hybridized to the centromeric regions and weakly to telomeric regions of most chromosomes. The G-banding analysis and chromosome painting with whole chromosome probes from Carollia brevicauda (CBR) and Phyllostomus hastatus (PHA) enabled the establishment of genome-wide homologies between MHI, CBR and PHA.Conclusions
The karyotypes of Brazilian specimens of Micronycteris hirsuta described here are new to Micronycteris and reinforce that M. hirsuta does not represent a monotypic taxon. Our results corroborate the hypothesis of karyotypic megaevolution within Micronycteris, and strong evidence for this is that the entire chromosome complement of M. hirsuta was shown to be derivative with respect to species compared in this study.70.
Wuelton M Monteiro Fernando FA Val André M Siqueira Gabriel P Franca Vanderson S Sampaio Gisely C Melo Anne CG Almeida Marcelo AM Brito Henry M Peixoto Douglas Fuller Quique Bassat Gustavo AS Romero Oliveira Maria Regina F Lacerda Marcus Vinícius G 《Memórias do Instituto Oswaldo Cruz》2014,109(5):553-568