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111.
112.
Kumiko Kondo Yu Takeyama Ei-ichiro Sunamura Yuka Madoka Yuki Fukaya Atsuko Isu Toru Hisabori 《BBA》2018,1859(5):319-325
F1 is a soluble part of FoF1-ATP synthase and performs a catalytic process of ATP hydrolysis and synthesis. The γ subunit, which is the rotary shaft of F1 motor, is composed of N-terminal and C-terminal helices domains, and a protruding Rossman-fold domain located between the two major helices parts. The N-terminal and C-terminal helices domains of γ assemble into an antiparallel coiled-coil structure, and are almost embedded into the stator ring composed of α3β3 hexamer of the F1 molecule. Cyanobacterial and chloroplast γ subunits harbor an inserted sequence of 30 or 39 amino acids length within the Rossman-fold domain in comparison with bacterial or mitochondrial γ. To understand the structure–function relationship of the γ subunit, we prepared a mutant F1-ATP synthase of a thermophilic cyanobacterium, Thermosynechococcus elongatus BP-1, in which the γ subunit is split into N-terminal α-helix along with the inserted sequence and the remaining C-terminal part. The obtained mutant showed higher ATP-hydrolysis activities than those containing the wild-type γ. Contrary to our expectation, the complexes containing the split γ subunits were mostly devoid of the C-terminal helix. We further investigated the effect of post-assembly cleavage of the γ subunit. We demonstrate that insertion of the nick between two helices of the γ subunit imparts resistance to ADP inhibition, and the C-terminal α-helix is dispensable for ATP-hydrolysis activity and plays a crucial role in the assembly of F1-ATP synthase. 相似文献
113.
Daisuke Matsuda Madoka Kawamura Yohei Kobashi Fumiyasu Shiozawa Youichirou Suga Keiko Fusegi Shinichi Nishimoto Kayo Kimura Masako Miyoshi Noriko Takayama Hiroyuki Kakinuma Norikazu Ohtake 《Bioorganic & medicinal chemistry》2018,26(8):1832-1847
The design and synthesis of a novel class of 7-azaspiro[3.5]nonane GPR119 agonists are described. In this series, optimization of the right piperidine N-capping group (R2) and the left aryl group (R3) led to the identification of compound 54g as a potent GPR119 agonist. Compound 54g showed a desirable PK profile in Sprague-Dawley (SD) rats and a favorable glucose lowering effect in diabetic rats. 相似文献
114.
A 570-kb DNA Sequence of the Escherichia coli K-12 Genome Corresponding to the 28.0-40.1 min Region on the Linkage Map 总被引:1,自引:0,他引:1
Aiba Hiroji; Baba Tomoya; Hayashi Kouji; Inada Toshifumi; Isono Katumi; Itoh Takeshi; Kasai Hiroaki; Kashimoto Kaoru; Kimura Shigenobu; Kitakawa Madoka; Kitagawa Masanari; Makino Kozo; Miki Takeyoshi; Mizobuchi Kiyoshi; Mori Hirotada; Mori Tomoko; Motomura Kouji; Nakade Shinsuke; Nakamura Yoshikazu; Nashimoto Hiroko; Nishio Yoshitaka; Oshima Taku; Saito Noriko; Sampei Gen-ichi; Seki Yasushi; Sivasundaram Suharnan; Tagami Hideaki; Takeda Jun-ichi; Takemoto Keiko; Takeuchi Yasushi; Wada Chieko; Yamamoto Yoshihiro; Horiuchi Takashi 《DNA research》1996,3(6):363-377
The 569,750 base pair sequence corresponding to the 28.040.1min region on the genetic map of Escherichia coli K-12 (W3110)was determined. This region includes the replication terminusregion and contained at least 549 potential open reading frames.Among them, 160 (29%) were previously reported, 174 (32%) werehomologous to other known genes, 102 (18%) were identical orsimilar to hypothetical genes registered in databases, and theremaining 113 (21%) did not show a significant similarity toany other gene. Of interest was the finding of a large numberof genes and gene clusters in andnear the replication terminationregion which had been thought to be genetically silent. Thoseincludeda cluster of genes for fatty acid ß-oxidation,the third copy of the pot (spermidine/putrescine transport system)gene cluster, the second dpp (dipeptide transport system) operon,the second dsm (anaerobic dimethyl sulfoxide reductase) operon,a cluster of fim (fimbrial) genes anda DNA helicase-like genewith a high molecular weight. In addition, we found the dnaC-and dnaT-like genes in the cryptic prophage, Rac, anda numberof genes originated probably from plasmids. 相似文献
115.
Carboxyl terminal region of the MukB protein in Escherichia coli is essential for DNA binding activity 总被引:1,自引:0,他引:1
Abu Z.M. Saleh Kunitoshi Yamanaka Hironori Niki Teru Ogura Mitsuyoshi Yamazoe Sola Hiraga 《FEMS microbiology letters》1996,143(2-3):211-216
Abstract The purified MukB protein of Escherichia coli has DNA binding activity and nucleotide binding activity. We have isolated a mutation, mukB1013 , causing a substitution of valine at position 1379 to leucine. This mutant MukB protein was defective for DNA binding, while the ATP binding activity remained unaffected. A truncated MukB protein that is short of 109 amino acids from the C-terminus failed to bind DNA. 相似文献
116.
Toshiya Imajo Hiroyuki Kawachi Haruyuki Atomi Shin-ichi Sanuki Setsuko Yamamoto Mitsuyoshi Ueda A. Tanaka 《Archives of microbiology》1997,168(5):389-395
Although peroxisomal localization of NADP-linked isocitrate dehydrogenase (Idp) was first demonstrated in Candida tropicalis, the mitochondrial isozyme has not been found in this yeast. Here we report that the presence of mitochondrial Idp in the
yeast was demonstrated by screening for its gene with a DNA probe containing conserved sequences of Idps from various organisms.
The nucleotide sequence of the gene (CtIDP1) revealed a 1,290-bp open reading frame corresponding to a 430-amino-acid protein with a high similarity to previously reported
Idps. Overexpression of CtIDP1 in Saccharomyces cerevisiae gave a high intracellular Idp activity, and the purified recombinant Idp was shown to be a homodimer with a subunit molecular
mass of approximately 44 kDa, different from that of peroxisomal Idp (45 kDa) previously purified from C. tropicalis. Western blot analysis of the subcellular fractions from acetate-grown C. tropicalis with polyclonal antibodies raised against the recombinant CtIdp1 showed that the CtIdp1 in C. tropicalis was localized in mitochondria but not in peroxisomes. Similar levels of CtIDP1 mRNA and its protein product were detected in cells grown on glucose, acetate, and n-alkane, although a slight decrease was observed in n-alkane-grown cells. From these results, CtIdp1 was demonstrated to be mitochondrial Idp. The properties of mitochondrial
Idp and peroxisomal Idp isozymes were proven to be similar, but they were immunochemically distinct, suggesting the presence
of another gene responsible for peroxisomal Idp in C. tropicalis.
Received: 11 March 1997 / Accepted: 24 June 1997 相似文献
117.
118.
119.
Hepatitis C virus NS5A protein interacts with lysine methyltransferase SET and MYND domain‐containing 3 and induces activator protein 1 activation 下载免费PDF全文
Ming Chen Xiang Gan Ken‐ichi Yoshino Madoka Kitakawa Ikuo Shoji Lin Deng Hak Hotta 《Microbiology and immunology》2016,60(6):407-417
Hepatitis C virus (HCV) non‐structural protein 5A (NS5A) is a multifunctional protein that is involved in the HCV life cycle and pathogenesis. In this study, a host protein(s) interacting with NS5A by tandem affinity purification were searched for with the aim of elucidating the role of NS5A. An NS5A‐interacting protein, SET and MYND domain‐containing 3 (SMYD3), a lysine methyltransferase reportedly involved in the development of cancer, was identified. The interaction between NS5A and SMYD3 was confirmed in ectopically expressing, HCV RNA replicon‐harboring and HCV‐infected cells. The other HCV proteins did not bind to SMYD3. SMYD3 bound to NS5A of HCV genotypes 1b and 2a. Deletion mutational analysis revealed that domains II and III of NS5A (amino acids [aa] 250 to 447) and the MYND and N‐SET domains of SMYD3 (aa 1 to 87) are involved in the full extent of NS5A‐SMYD3 interaction. NS5A co‐localized with SMYD3 exclusively in the cytoplasm, thereby inhibiting nuclear localization of SMYD3. Moreover, NS5A formed a complex with SMYD3 and heat shock protein 90 (HSP90), which is a positive regulator of SMYD3. The intensity of binding between SMYD3 and HSP90 was enhanced by NS5A. Luciferase reporter assay demonstrated that NS5A significantly induces activator protein 1 (AP‐1) activity, this being potentiated by co‐expression of SMYD3 with NS5A. Taken together, the present results suggest that NS5A interacts with SMYD3 and induces AP‐1 activation, possibly by facilitating binding between HSP90 and SMYD3. This may be a novel mechanism of AP‐1 activation in HCV‐infected cells. 相似文献
120.
Nuclear extrusion precedes discharge of genomic DNA fibers during tunicamycin‐induced neutrophil extracellular trap‐osis (NETosis)‐like cell death in cultured human leukemia cells 下载免费PDF全文