MicroRNAs and their role in viral infection

Recently, a class of about 22 nucleotides (nt) small RNA has been discovered in many eukaryotes, termed microRNAs (miRNAs), which have a variety of functions. Many recent findings have demonstrated that viruses can also encode their own miRNAs. Meanwhile, other findings reveal a relationship between host miRNA and viral infection. These findings suggest a tight relationship between host and viral infection via miRNA pathway. This article introduces the miRNAs encoded by viruses and reviews the advances of the interaction of the mammalian host miRNAs and viral infection.     

Phagocytosis of apoptotic cells is regulated by a UNC-73/TRIO-MIG-2/RhoG signaling module and armadillo repeats of CED-12/ELMO

BACKGROUND: Phagocytosis of cells undergoing apoptosis is essential during development, cellular turnover, and wound healing. Failure to promptly clear apoptotic cells has been linked to autoimmune disorders. C. elegans CED-12 and mammalian ELMO are evolutionarily conserved scaffolding proteins that play a critical role in engulfment from worm to human. ELMO functions together with Dock180 (a guanine nucleotide exchange factor for Rac) to mediate Rac-dependent cytoskeletal reorganization during engulfment and cell migration. However, the components upstream of ELMO and Dock180 during engulfment remain elusive. RESULTS: Here, we define a conserved signaling module involving the small GTPase RhoG and its exchange factor TRIO, which functions upstream of ELMO/Dock180/Rac during engulfment. Complementary studies in C. elegans show that MIG-2 (which we identify as the homolog of mammalian RhoG) and UNC-73 (the TRIO homolog) also regulate corpse clearance in vivo, upstream of CED-12. At the molecular level, we identify a novel set of evolutionarily conserved Armadillo (ARM) repeats within CED-12/ELMO that mediate an interaction with activated MIG-2/RhoG; this, in turn, promotes Dock180-mediated Rac activation and cytoskeletal reorganization. CONCLUSIONS: The combination of in vitro and in vivo studies presented here identify two evolutionarily conserved players in engulfment, TRIO/UNC73 and RhoG/MIG-2, and the TRIO --> RhoG signaling module is linked by ELMO/CED-12 to Dock180-dependent Rac activation during engulfment. This work also identifies ARM repeats within CED-12/ELMO and their role in linking RhoG and Rac, two GTPases that function in tandem during engulfment.     

沈阳城市绿地系统的景观生态评价

运用景观生态学原理和方法,选取多样性指数、均匀度指数、破碎度指数、分离度指数、分维度指数、连通性指数等8个景观格局指数对沈阳市城市绿地系统的景观格局进行分析。结果表明:沈阳城市绿地景观总体表现为绿地率较低,绿地斑块分布不均衡,景观结构不合理,破碎度较高,分维数较低,景观类型较齐全,均匀度较低,景观分离度较小。针对存在的问题,提出了沈阳城市绿地景观生态规划建议。     

Biodegradation of Swainsonine by Acinetobacter calcoaceticus strain YLZZ-1 and its isolation and identification

Eight swainsonine (SW)-degrading bacteria were isolated from the soil where locoweed was buried for 6 months and one of the strains (YLZZ-1) was selected for further study. Based on morphology, physiologic tests, 16S rRNA gene sequence, and phylogenetic characteristics, the strain showed the greatest similarity to members of the order Acinetobacters and within the order to members of the Acinetobacter calcoaceticus group. The ability of the strain for degrading SW, as sole carbon source, was investigated under different culture conditions. The preferential temperature and initial pH for the strain were 25–35°C and 6–9, respectively. The optimal temperature for the strain was 30°C and the optimal pH was 7.0. There was a positive correlation between degradation rate and inoculation amount. The concentration of SW affected the degradation ability. When the concentration of SW was lower than 100 mg/l, SW decreased immediately after incubation, and when the concentration of SW was 200 mg/l, there was an inhibiting effect for bacteria growth and SW degradation. The strain could degrade SW completely within 14 h when the concentration of SW was 50 mg/l. These results highlight the potential of this bacterium to be used in detoxifying of SW in livestock consuming locoweed.     

标记滞留细胞技术结合干细胞标记物检测小鼠子宫内膜干细胞

目的通过标记滞留细胞技术检测昆明小鼠子宫内膜干细胞的存在及其分布情况;观察P63和Musashi-1在不同周龄小鼠子宫内膜的表达以及两者与标记滞留细胞的关系,探讨P63和Musashi-1作为子宫内膜干细胞特异性标记物的可能性。方法出生3天雌性昆明小鼠皮下注射BrdU,分别在1w、2w、3w、4w、6w、8w和10w处死小鼠取其子宫。采用免疫组化法分别检测BrdU、P63和Musashi-1在各周龄小鼠子宫内膜的表达情况。结果标记后1w的小鼠,子宫内膜绝大部分的上皮和基质细胞都被BrdU标记。随着小鼠周龄的增加,子宫内膜BrdU阳性细胞百分率逐渐降低。至第8w时,仅在基质中有极少量的BrdU阳性细胞,主要位于基质与肌层交界处。早期小鼠子宫内膜组织中P63和Musashi-1阳性细胞数量较多,随着子宫内膜的逐渐发育成熟,P63和Musashi-1的表达逐渐减少,其表达规律及分布与标记滞留细胞基本一致。结论 (1)小鼠子宫内膜标记滞留细胞主要位于基质内膜与肌层交界处,这些细胞的分布与推测的子宫内膜干细胞的分布部位相符。(2)P63和Musashi-1是较特异的干细胞标记物。     

Phylum-Level Archaeal Distributions in the Sediments of Chinese Lakes With a Large Range of Salinity

Uncovering microbial diversity and their influencing factors is a primary goal for microbial ecology. In comparison with studies on bacterial diversity, limited is known about archaeal diversity and its response to influencing factors in lakes. Here, we investigated the archaeal community compositions (ACCs) and their correlation with spatial/environmental factors in the sediments from 38 Chinese lakes with a large range of salinity (0.2–363.1 g/l) and pairwise geographic distance (3–3656 km). Illumina-Miseq sequencing was employed to characterize the ACCs in the lakes samples. The results showed that Euryarchaeota, Bathyarchaeota, Thaumarchaeota, and Woesearchaeota were the dominant archaeal phyla in the studied samples, and they each can occur in the samples with a wide range of salinity (0.2–363.1 g/l) although their abundance was relatively low (<1%) in certain samples. The Thaumarchaeota and Woesearchaeota phyla dominated (up to 90% of total sequences) some lake sediments. Mantel test indicated that compositions of total archaeal community and the Euryarchaeota and Woesearchaeota populations were significantly (p < 0.05) correlated with geographic distance in the studied lake sediments. Salinity was the most important environmental factor influencing the compositions of the total archaeal community and the Euryarchaeota population, while it did not show significant influence on the distribution of the Woesearchaeota and Thaumarchaeota populations. Taken together, this survey expands our current knowledge on the ecology of lacustrine archaea and give clues for studying the archael role in biogeochemical cycles in lakes.     

The Molecular Mechanisms of Protective Role of Se on the G<Subscript>2</Subscript>/M Phase Arrest of Jejunum Caused by AFB<Subscript>1</Subscript>

Aflatoxin B₁ (AFB₁) is the most toxic among the mycotoxins and causes detrimental health effects on human and animals. Selenium (Se) plays an important role in chemopreventive, antioxidant, anticarcinogen, and detoxification and involved in cell cycle regulation. The aim of this study was to explore the molecular mechanisms of selenium involved in inhibition of G₂/M cell cycle arrest of broiler’s jejunum. A total of 240 one-day-old healthy Cobb broilers were randomly divided into four groups and fed with basal diet (control group), 0.6 mg/kg AFB₁ (AFB₁ group), 0.4 mg/kg Se (+Se group), and 0.6 mg/kg AFB₁ + 0.4 mg/kg Se (AFB₁ + Se group) for 21 days, respectively. The histological observation and morphological analysis revealed that 0.4 mg/kg Se prevented the AFB₁-associated lesions of jejunum including the shedding of the apical region of villi, the decreased villus height, and villus height/crypt ratio. The cell cycle analysis by flow cytometry showed that 0.4 mg/kg Se ameliorated the AFB₁-induced G₂/M phase arrest in jejunal cells. Moreover, the expressions of ATM, Chk2, p53, Mdm2, p21, PCNA, Cdc25, cyclin B, and Cdc2 analyzed by immunohistochemistry and qRT-PCR demonstrated that 0.4 mg/kg Se restored these parameters to be close to those in the control group. In conclusion, Se promoted cell cycle recovery from the AFB₁-induced G₂/M phase arrest by the molecular regulation of ATM pathway in the jejunum of broilers. The outcomes from the present study may lead to a better understanding of the nature of selenium’s essentiality and its protective roles against AFB₁.     

杜鹃花属植物扦插繁殖研究进展

我国有着丰富的杜鹃花资源,但有关其繁殖应用的研究还具有一定的局限。种子育苗耗时长,组培育苗成本和技术要求高,都不适于杜鹃花属植物的大面积生产。扦插繁殖快,还可保持母本的优良性状。从插条的选择,准备,插条的生根激素处理,扦插基质的选择,外界环境条件对扦插成活率的影响及扦插后的养护管理等六个方面对杜鹃的扦插繁殖技术的研究进行综述,以期推进杜鹃花属植物,尤其是中国野生杜鹃的引种驯化和大面积的推广应用。