闽江河口湿地不同植被带土壤全硅的含量及分布特征

硅是湿地系统元素循环所关注的重要内容之一,土壤全硅的分布特征与湿地土壤-植物系统活跃程度密切相关。于2016年1—12月,以闽江河口鳝鱼滩湿地为研究对象,通过野外原位采样及室内实验分析,对短叶茳芏、短叶茳芏与互花米草交错带、互花米草3种植物类型湿地的土壤全硅含量和储量的变化特征进行观测。结果表明:短叶茳芏、短叶茳芏与互花米草交错带、互花米草湿地土壤全硅的年平均含量依次为197.67、201.21、210.33 mg/g,表现为由陆向海方向逐渐增加的趋势;季节上均呈现秋冬高于春夏的趋势;土壤全硅含量和储量均表现为上部土层(0—30cm)高于下部土层(30—60cm)。经统计分析发现,湿地土壤全硅含量与有机质显著负相关(P<0.05),与含水率和pH有极显著正相关关系(P<0.01)。除短叶茳芏湿地外,其余2种湿地土壤全硅含量与有效硅含量显著负相关(P<0.05)。研究闽江河口湿地不同植被带土壤全硅含量和储量及其分布特征,旨在揭示湿地土壤全硅水平在不同类型湿地植被生长影响下的变化过程,为本研究区的硅素研究补充关键数据。     

幽门螺杆菌感染与胃癌相关基因的筛选及预后分析

目的 通过分析幽门螺杆菌感染胃黏膜组织和胃癌细胞系后的差异基因变化,并在癌症基因组图谱(The Cancer Genome Atlas,TCGA)数据库和肿瘤基因芯片(Oncomine)数据库进行验证,探究幽门螺杆菌导致胃癌发生、发展的分子机制。 方法 分析基因表达汇编(Gene Expression Omnibus,GEO)数据库幽门螺杆菌感染相关芯片集GSE5081与GSE70394,绘制维恩图查找幽门螺杆菌感染后共同上调的差异基因。对共同上调的差异基因进行功能富集分析。通过TCGA和Oncomine数据库验证差异基因在胃癌中的表达。利用Kaplan Meier Plotter数据库和GEPIA数据库分析差异基因表达高低与胃癌患者预后是否存在相关性。 结果 通过差异基因筛选和维恩分析,两个芯片集共有21个共同上调差异基因。GO分析发现共同上调差异基因主要富集在对细菌来源分子的反应、趋化因子CXCR受体结合、中性粒细胞趋化作用等相关的基因功能上;KEGG通路主要富集在癌症通路、TNF信号通路、趋化因子信号通路等。STRING以及PPI数据库分析发现21个基因中PRDM1、IL10、NRP1、BIRC3、GNG13、CXCL1、CXCL2、CXCL3、CXCL8基因存在有网络关系,属于关键枢纽基因。通过TCGA和Oncomine数据库筛选及验证,发现在胃癌组织中NRP1、CXCL1、CXCL8 基因明显上调,结果差异有统计学意义(TCGA数据库中,三者P值均小于0.05,Oncomine数据库中,NRP1:t=4.607,P结论 不同的数据库均显示NRP1、CXCL1、CXCL8三个基因与幽门螺杆菌感染相关,同时在胃癌中高表达,并且NRP1的高表达与胃癌的不良预后相关,这些结果为进一步探究幽门螺杆菌导致胃癌发生、发展的分子机制提供了重要基础。     

壶腹周围憩室对胆总管结石患者结石成分及胆道菌群的影响

探究壶腹周围憩室(periampullary diverticulum, PAD)对胆总管结石成分及胆道菌群的影响。

收集我院行内镜下取石治疗患者44例, 其中14例伴有PAD、30例无PAD, 使用红外光谱法和分光光度法分析结石样本中胆固醇、胆红素含量。从入组患者中分别筛选8例伴有PAD的患者为PAD组, 8例无PAD的为对照组, 收集患者胆汁样本, 提取样本中菌群DNA进行扩增并构建细菌基因文库, 经Illumina MiSeq平台高通量测序后进行生物信息学分析。最后对差异菌群与胆红素、胆固醇进行相关性分析。

2组患者对比年龄、胆管直径、结石直径和总胆红素(TBIL)等资料差异均无统计学意义(均P > 0.05)。2组患者结石中胆固醇和胆红素含量[(39.77±13.00)%vs(61.80±26.00)%, Z=-2.973, P=0.003;(27.03±13.00)%vs(12.27±16.00)%, Z=-2.999, P=0.003)差异存在统计学意义。PAD组与对照组Alpha多样性差异无统计学意义(P > 0.05), 而在物种群落组成上存在差异。卟啉单胞菌属、嗜胆菌属等10种菌属在PAD组中的丰度高于对照组, 真杆菌属、乳杆菌属较对照组降低, 差异均有统计学意义(均P < 0.05)。相较于对照组, PAD组牛磺酸和次牛磺酸的代谢、钙信号通路等5条通路差异存在统计学意义(均P < 0.05)。嗜胆菌属和卟啉单胞菌属与胆红素具有相关性(R²=0.701 3, P < 0.000 1;R²=0.286 8, P=0.032 5)。

伴有PAD的患者结石含有更高的胆红素成分。PAD的存在改变胆道菌群多样性、构成及丰度, 并可能通过菌群变化影响结石成分。

     

Neurotoxic,cytotoxic, apoptotic and antiproliferative effects of some marine algae extracts on the NA2B cell line

Oxidative stress contributes to cancer pathologies and to apoptosis. Marine algae exhibit cytotoxic, antiproliferative and apoptotic effects; their metabolites have been used to treat many types of cancer. We investigated in culture extracts of Petalonia fascia, Jania longifurca and Halimeda tuna to determine their effects on mouse neuroblastoma cell line, NA2B. NA2B cells were treated with algae extracts, and the survival and proliferation of NA2B cells were assessed using the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay. The effects of algae extracts on oxidative stress in NA2B cells also were investigated using nitric oxide synthase (NOS) immunocytochemistry and apoptosis was assessed using terminal deoxynucleotidyl transferase dUTP nick end labeling. We observed significant neurite inhibition with moderate damage by the neurotoxicity-screening test (NST) at IC₅₀ dilutions of the extracts. MTT demonstrated that J. longifurca extracts were more toxic than P. fascia and H. tuna extracts. We found an increase of endothelial and inducible NOS immunostaining for oxidative stress and TUNEL analysis revealed increased apoptosis after application of extract. Our findings suggest that the algae we tested may have potential use for treatment of cancer.     

Molecular evolution of cytochrome c oxidase: rate variation among subunit VIa isoforms

Cytochrome c oxidase (COX) consists of 13 subunits, 3 encoded in the mitochondrial genome and 10 in the nucleus. Little is known of the role of the nuclear-encoded subunits, some of which exhibit tissue-specific isoforms. Subunit VIa is unique in having tissue-specific isoforms in all mammalian species examined. We examined relative evolutionary rates for the COX6A heart (H) and liver (L) isoform genes along the length of the molecule, specifically in relation to the tissue-specific function(s) of the two isoforms. Nonsynonymous (amino acid replacement) substitutions in the COX6AH gene occurred more frequently than in the ubiquitously expressed COX6AL gene. Maximum-parsimony analysis and sequence divergences from reconstructed ancestral sequences revealed that after the ancestral COX6A gene duplicated to yield the genes for the H and L isoforms, the sequences encoding the mitochondrial matrix region of the COX VIa protein experienced an elevated rate of nonsynonymous substitutions relative to synonymous substitutions. This is expected for relaxed selective constraints after gene duplication followed by purifying selection to preserve the replacements with tissue-specific functions.      

京族药用红树林民族植物学知识及现状

京族是我国唯一的海洋民族,在长期与红树林为伴的生存环境中,积累了丰富的利用红树林植物的民族植物学知识。然而,这些知识至今仍不为外界所知。为掌握京族药用红树林民族植物学知识和现状,该研究采用民族植物学和植物分类学方法,调查京族药用红树林知识中的红树林植物种类,记录其具体药用用途,并分析其生存现状及其中包含的可持续利用红树林植物资源经验。结果表明:共记录到京族药用红树林植物15种隶属于10科,具体药用用途共49种。其中,20种已有报道,29种未见报道;通过京族对红树林药用知识认知程度和依赖程度的调查还表明,京族历史上依赖本民族草医的情形已经基本消失,对红树林医药的依赖性和需求性也在消失。最后,剖析了京族在药用红树林植物选择与采集中的可持续利用经验。该研究结果不仅补充和拓宽了红树林民间药物的利用知识,而且为红树植物资源的管理与可持续利用提供了新视角。     

高丹草杂种和亲本叶片基因差异表达研究

以4份高粱不育系和5种类型苏丹草为亲本,按照NCⅡ设计配制成20个杂交组合,分析各组合及亲本的表型值和中亲及超亲优势并筛选出8个优势强的组合为试材,利用cDNA-AFLP技术,分析杂种与亲本苗期叶片基因差异表达类型与主要产量性状的杂种表现及杂种优势的关系。研究表明:(1)12对引物共扩增出315条TDFs,杂种与亲本间基因表达类型有:单亲表达一致一型(P1F1型)和二型(P2F1型)、杂种特异表达类型(F1型)、单亲表达沉默一型(P1型)和二型(P2型)、双亲共沉默类型(P1P2型)和杂种亲本表达一致型(P1F1P2型)7种。(2)在差异展示类型与产量构成因素的相关分析中,有效分蘖数与P1F1型(0.726**)呈极显著正相关,单株鲜重与P1P2型(0.659*)、叶长与P2型(0.647*)呈显著正相关,成株期叶片数与F1型(-0.81**)呈极显著负相关。在与中亲优势相关分析中发现,单株鲜重与P1(0.695*)、P2(0.637*)呈显著正相关,单株鲜重与P1F1P2型(0.743**)呈极显著正相关,叶宽与P1P2型(-0.619*)呈显著负相关。在与超亲优势进行相关分析后发现,穗长与P2F1型(0.732**)呈极显著正相关,叶宽与P2F1型(-0.731**)以及P1P2型(-0.731**)呈极显著负相关。(3)差异展示类型P1F1、P2F1、P1和P2是显性效应类型,共占总检测的91.4%。差异展示类型F1和P1P2表现超显性,共占总检测的4.8%,说明各个性状的杂种表现主要受到的是(超)显性效应影响。(4)对8个与高丹草杂种优势相关的TDFs进行回收及BLAST分析均得到同源核苷酸,并且找到7个同源蛋白,这些蛋白质在控制植物生长发育方面具有重要作用。(5)将克隆测序获得差异片段的核苷酸序列,采用半定量RT-PCR进行了验证。本研究为进一步揭示高丹草杂种优势的分子机制和提高高丹草强优势组合的筛选效率以及种质资源的创建提供依据。     

Synthesis of N3-fumaramoyl-L-2,3-diaminopropanoic acid analogues, the irreversible inhibitors of glucosamine synthetase

Several analogues of N3-fumaramoyl-L-2,3-diaminopropanoic acid were synthesized and evaluated for inhibition of glucosamine-6-phosphate synthetase activity. The syntheses were accomplished by acylation reaction of N2-tert.-butoxycarbonyl-L-2,3-diaminopropanoic acid (Boc-A2pr) or N2-tert.-butoxycarbonyl-L-2,4-diaminobutanoic acid (Boc-A2-bu) with the N-succinimidoyl esters of several derivatives of alpha, beta-unsaturated acids 2a-d followed by deprotection of the Boc groups. The obtained compounds were tested for inhibition of glucosamine synthetase isolated from Salmonella typhimurium and Saccharomyces cerevisiae. The results indicated that among the synthesized compounds, N3-4-methoxyfumaroyl-L-2,3-diaminopropanoic acid (FMDP) was the most powerful inhibitor of glucosamine synthetase.     

Thorns as induced defenses: experimental evidence

Summary We report evidence from controlled experiments that long straight thorns deter herbivory by browsers. Cut branches of three woody species that had their thorns removed suffered significantly greater herbivory by a tethered goat than did paired intact branches. Branches on living Acacia seyal plants that had their thorns removed suffered significantly greater herbivory by a wild population of free-ranging giraffes than did intact branches on the same plants. These differences in herbivory resulted in long term losses of branch length in clipped as opposed to control branches. In addition, branches within reach of giraffes produced longer thorns and a greater density of thorns than did higher branches. These results imply that increased thorn length is an induced defense.No significance should be attached to order of authorship