Molecular Characterization and Evolution of Self-Incompatibility Genes in Arabidopsis thaliana: The Case of the Sc Haplotype

The switch from an outcrossing mode of mating enforced by self-incompatibility to self-fertility in the Arabidopsis thaliana lineage was associated with mutations that inactivated one or both of the two genes that comprise the self-incompatibility (SI) specificity-determining S-locus haplotype, the S-locus receptor kinase (SRK) and the S-locus cysteine-rich (SCR) genes, as well as unlinked modifier loci required for SI. All analyzed A. thaliana S-locus haplotypes belong to the SA, SB, or SC haplotypic groups. Of these three, the SC haplotype is the least well characterized. Its SRKC gene can encode a complete open-reading frame, although no functional data are available, while its SCRC sequences have not been isolated. As a result, it is not known what mutations were associated with inactivation of this haplotype. Here, we report on our analysis of the Lz-0 accession and the characterization of its highly rearranged SC haplotype. We describe the isolation of its SCRC gene as well as the subsequent isolation of SCRC sequences from other SC-containing accessions and from the A. lyrata S36 haplotype, which is the functional equivalent of the A. thaliana SC haplotype. By performing transformation experiments using chimeric SRK and SCR genes constructed with SC- and S36-derived sequences, we show that the SRKC and SCRC genes of Lz-0 and at least a few other SC-containing accessions are nonfunctional, despite SCRC encoding a functional full-length protein. We identify the probable mutations that caused the inactivation of these genes and discuss our results in the context of mechanisms of S-locus inactivation in A. thaliana.     

Holarctic genetic structure and range dynamics in the woolly mammoth

Ancient DNA analyses have provided enhanced resolution of population histories in many Pleistocene taxa. However, most studies are spatially restricted, making inference of species-level biogeographic histories difficult. Here, we analyse mitochondrial DNA (mtDNA) variation in the woolly mammoth from across its Holarctic range to reconstruct its history over the last 200 thousand years (kyr). We identify a previously undocumented major mtDNA lineage in Europe, which was replaced by another major mtDNA lineage 32–34 kyr before present (BP). Coalescent simulations provide support for demographic expansions at approximately 121 kyr BP, suggesting that the previous interglacial was an important driver for demography and intraspecific genetic divergence. Furthermore, our results suggest an expansion into Eurasia from America around 66 kyr BP, coinciding with the first exposure of the Bering Land Bridge during the Late Pleistocene. Bayesian inference indicates Late Pleistocene demographic stability until 20–15 kyr BP, when a severe population size decline occurred.     

N1,N3-disubstituted uracils as nonnucleoside inhibitors of HIV-1 reverse transcriptase

A series of phenyloxyethyl and cinnamyl derivatives of substituted uracils were synthesized and found to exhibit potent activity against HIV-RT and HIV replication in cell culture. In general, the cinnamyl derivatives proved superior to the phenyloxyethyl derivatives, however 1-[2-(4-methylphenoxy)ethyl]-3-(3,5-dimethylbenzyl)uracil (19) exhibited the highest activity (EC₅₀ = 0.27 μM) thus confirming that the 3-benzyluracil fragment in the NNRTI structure can be regarded as a functional analogue of the benzophenone pharmacophore typically found in NNRTIs.     

Synthesis and antibacterial activity of novel phosphonium salts on the basis of pyridoxine

A series of 13 phosphonium salts on the basis of pyridoxine derivatives were synthesized and their antibacterial activity against clinically relevant strains was tested in vitro. All compounds were almost inactive against gram-negative bacteria and exhibited structure-dependent activity against gram-positive bacteria. A crucial role of ketal protection group in phosphonium salts for their antibacterial properties was demonstrated. Among synthesized compounds 5,6-bis[triphenylphosphonio(methyl)]-2,2,8-trimethyl-4H-[1,3]dioxino[4,5-c]pyridine dichloride (compound 20) was found to be the most effective towards Staphylococcus aureus and Staphylococcus epidermidis strains (MIC 5 μg/ml). The mechanism of antibacterial activity of this compound probably involves cell penetration and interaction with genomic and plasmid DNA.     

Synthesis and anti-HCMV activity of 1-[ω-(phenoxy)alkyl]uracil derivatives and analogues thereof

HCMV infection represents a life-threatening condition for immunocompromised patients and newborn infants and novel anti-HCMV agents are clearly needed. In this regard, a series of 1-[ω-(phenoxy)alkyl]uracil derivatives were synthesized and examined for antiviral properties. Compounds 17, 20, 24 and 28 were found to exhibit highly specific and promising inhibitory activity against HCMV replication in HEL cell cultures with EC₅₀ values within 5.5–12 μM range. Further studies should be undertaken to elucidate the mechanism of action of these compounds and the structure–activity relationship for the linker region.     

萨哈林岛舞蛛属一新种记述

记述了采自萨哈林岛1新种,Alopecosa mikhailovi sp.nov.,2♂♂,新种与solivaga种团近似.     

First data about cave spiders (Arachnida: Araneae) from Iran

This paper reports seven species found in Shirabad Cave located in the western part of Golestan Province and two species found nearby. Three families: Anyphaenidae, Segestriidae and Theridiosomatidae, and one species, Metellina merianae (Scopoli, 1763) are recorded from Iran for the first time. Two species are described as new: Tegenaria zamanii Marusik & Omelko, sp.n. (♀) and Segestria mirshamsii Marusik & Omelko, sp.n. (♀). Four species: Lepthyphantes iranicus Saaristo & Tanasevitch, 1996, Metellina merianae, Octonoba yesoensis (Saito, 1934) and Pholcus sp. are illustrated. Uloborus georgicus Mcheidze, 1997 from Eastern Georgia is synonymized with Octonoba yesoensis. The distribution of all species treated in the paper is briefly discussed, with emphasis on the easternmost records.

http://www.zoobank.org/urn:lsid:zoobank.org:pub:614A0FF0-40B0-4A7E-B2B8-C6B117A80AFE     

The ecology of the habitats, nesting, and migration of the eastern population of the siberian crane (Grus leucogeranus Pallas, 1773)

The structure of the distribution range and population of the Siberian crane in its regular breeding area in the northeastern Yakutian tundra are described, as well as the migration terms, intensity, routes, and stopover sites. The territorial pairs (71.7–97.1% of the summer population), which in 2006 were represented by the birds at ages of 8 to 21 years (mainly 20 years, accounting for 45.4%), constantly stayed on an area of 7.3–16.5 km² independently of their participation in breeding. The breeding success in this population varies from 4.3–8.7 to 65.0–83.3% and depends on the climatic conditions at the beginning of egg laying; these climatic conditions change rather unpredictably from year to year, as well as being seasonally unstable. This explains that fact that some generations in this population are particularly vulnerable to natural elimination factors because of their low numbers. Bird migration in Yakutia follows a narrow tunnel with the highest migratory intensity in the Middle Aldan Valley. In the fall, 30 to 50% of the entire population is visually recorded there.