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81.
Sean D. Mason Mike J. McLaughlin Caroline Johnston Ann McNeill 《Plant and Soil》2013,373(1-2):711-722
Background and aims
Recent research has demonstrated the high accuracy of a new method for assessment of plant available P in soil called diffusive gradients in thin-films (DGT). The process of P released by additions of bicarbonate to soil samples simulating common soil P tests is yet to be assessed by the new method (DGT). The aim of this study was to identify the pools of soil P extracted by soil test methods (DGT, Colwell and resin) by comparing, in 32P–labelled soils, the specific activity (SA) of phosphorus extracted by common soil test extracts with the SA of wheat plants grown in a range of agricultural soils from southern Australia.Methods
Wheat (cv. Frame) was grown for 4 weeks in 14 soils that were labelled uniformly with carrier-free 32P. The specific activity (SA) of P (MBq 32P kg 31P?1) in each soil test extract was compared to the SA of P in the wheat plants.Results
The SA of P in plants were similar to P extracted by the Colwell extractant in only 4 of the 14 soils; while SA in plants and extractants corresponded in 10 of the soils for the resin method and in 12 of the soils for the DGT method. Phosphorus in the Colwell and resin extract solutions had significantly lower SAs compared to P in the plants for 10 and 4 of the soils, respectively, indicating greater extraction of non-labile P sources (unlabelled 31P). Phosphorus in the DGT extractant had significantly lower SA than the plants for 1 soil and in 1 soil the SA was higher. Overall, across all soils, 25 % of P extracted by the Colwell method was non labile compared to 9 % and 2 % for the resin and DGT methods, respectively.Conclusion
The new DGT method for extraction of soil P has the potential to accurately predict occurrences of P deficiency because it generally extracts the same pool of labile soil P accessed by wheat plants, while methods using bicarbonate solution (e.g. Colwell, Olsen) or water (resin) at wide soil:solution ratios are more likely to measure more non-labile forms of P in soil. 相似文献82.
Shannon McNulty Mike Flint Stuart T. Nichol Christina F. Spiropoulou 《Journal of virology》2013,87(2):912-922
Hantavirus pulmonary syndrome (HPS) is a severe respiratory disease characterized by pulmonary edema, with fatality rates of 35 to 45%. Disease occurs following infection with pathogenic New World hantaviruses, such as Andes virus (ANDV), which targets lung microvascular endothelial cells. During replication, the virus scavenges 5′-m7G caps from cellular mRNA to ensure efficient translation of viral proteins by the host cell cap-dependent translation machinery. In cells, the mammalian target of rapamycin (mTOR) regulates the activity of host cap-dependent translation by integrating amino acid, energy, and oxygen availability signals. Since there is no approved pharmacological treatment for HPS, we investigated whether inhibitors of the mTOR pathway could reduce hantavirus infection. Here, we demonstrate that treatment with the FDA-approved rapamycin analogue temsirolimus (CCI-779) blocks ANDV protein expression and virion release but not entry into primary human microvascular endothelial cells. This effect was specific to viral proteins, as temsirolimus treatment did not block host protein synthesis. We confirmed that temsirolimus targeted host mTOR complex 1 (mTORC1) and not a viral protein, as knockdown of mTORC1 and mTORC1 activators but not mTOR complex 2 components reduced ANDV replication. Additionally, primary fibroblasts from a patient with tuberous sclerosis exhibited increased mTORC1 activity and increased ANDV protein expression, which were blocked following temsirolimus treatment. Finally, we show that ANDV glycoprotein Gn colocalized with mTOR and lysosomes in infected cells. Together, these data demonstrate that mTORC1 signaling regulates ANDV replication and suggest that the hantavirus Gn protein may modulate mTOR and lysosomal signaling during infection, thus bypassing the cellular regulation of translation. 相似文献
83.
Vertebrate populations are influenced by environmental processes that operate at a range of spatial and temporal scales. Wildfire is a disturbance that can affect vertebrate populations across large spatial scales, although vertebrate responses are frequently influenced by processes operating at smaller spatial scales such as topography, interspecific interactions and regional history. Here, we investigate the effects of a broad-scale wildfire on lizard assemblages in a desert region. We predicted that a rainfall gradient within the region affected by the wildfire would influence lizard responses to the fire by encouraging post-fire succession to proceed more rapidly in high-rainfall areas, and would be enabled in turn by more rapid vegetation recovery. To test our prediction, we censused lizards, measured rainfall, undertook vegetation surveys and sampled invertebrate abundance across burnt and unburnt habitat ecotones within three regional areas situated along a gradient of long-term annual rainfall. Lizard diversity was not affected by fire or region and lizard abundance was influenced only by region. Lizard assemblage composition was also only influenced by region, but this did not relate to differences in rainfall or habitat as we had predicted. Regional differences in lizard assemblages related instead to food availability. The observed differences also likely reflected regional differences in the strength of biotic interactions with predators and changes in land use. Our study shows that assemblage responses to a disturbance were not uniform within a large desert region and instead were influenced by other environmental processes operating simultaneously at multiple temporal and spatial scales. 相似文献
84.
Joyce Sayegh Jian Cao Mike Ran Zou Alfonso Morales Lauren P. Blair Michael Norcia Denton Hoyer Alan J. Tackett Jane S. Merkel Qin Yan 《The Journal of biological chemistry》2013,288(13):9408-9417
JARID1B (also known as KDM5B or PLU1) is a member of the JARID1 family of histone lysine demethylases responsible for the demethylation of trimethylated lysine 27 in histone H3 (H3K4me3), a mark for actively transcribed genes. JARID1B is overexpressed in several cancers, including breast cancer, prostate cancer, and lung cancer. In addition, JARID1B is required for mammary tumor formation in syngeneic or xenograft mouse models. JARID1B-expressing melanoma cells are associated with increased self-renewal character. Therefore, JARID1B represents an attractive target for cancer therapy. Here we characterized JARID1B using a homogeneous luminescence-based demethylase assay. We then conducted a high throughput screen of over 15,000 small molecules to identify inhibitors of JARID1B. From this screen, we identified several known JmjC histone demethylase inhibitors, including 2,4-pyridinedicarboxylic acid and catechols. More importantly, we identified several novel inhibitors, including 2-4(4-methylphenyl)-1,2-benzisothiazol-3(2H)-one (PBIT), which inhibits JARID1B with an IC50 of about 3 μm
in vitro. Consistent with this, PBIT treatment inhibited removal of H3K4me3 by JARID1B in cells. Furthermore, this compound inhibited proliferation of cells expressing higher levels of JARID1B. These results suggest that this novel small molecule inhibitor is a lead compound that can be further optimized for cancer therapy. 相似文献
85.
Capsule King Penguins recognize their mates by voice, but Guillemots do not need acoustic cues even though their calls show individual variation. Aims To determine whether the structure of Guillemot calls could allow individual recognition, as with King Penguin, and whether acoustic cues are used to locate mates among a dense mass of conspecifics at a colony. Methods Observations were made on breeding Guillemots and King Penguins. Calls made by birds returning to their mates were recorded, the signals digitized and the calls analysed. Calls were later played back to the mates of the birds concerned and the effects noted on both them and their neighbours. Results Both Guillemots and King Penguins emitted calls on return to the breeding site which contained individual signatures and were therefore potentially usable for mate recognition. In King Penguins, auditory recognition was essential for finding a mate, whereas in Guillemots most of the arriving birds located their mate in a dense crowd of conspecifics without the help of acoustic signals. Guillemots could differentiate neighbours from strangers without auditory cues. Conclusion Calls are essential for the successful identification of mates by King Penguins but not by Guillemots. 相似文献
86.
Eng Kuan Moo Matthias Amrein Marcelo Epstein Mike Duvall Noor Azuan Abu Osman Belinda Pingguan-Murphy Walter Herzog 《Biophysical journal》2013
Impact loading of articular cartilage causes extensive chondrocyte death. Cell membranes have a limited elastic range of 3–4% strain but are protected from direct stretch during physiological loading by their membrane reservoir, an intricate pattern of membrane folds. Using a finite-element model, we suggested previously that access to the membrane reservoir is strain-rate-dependent and that during impact loading, the accessible membrane reservoir is drastically decreased, so that strains applied to chondrocytes are directly transferred to cell membranes, which fail when strains exceed 3–4%. However, experimental support for this proposal is lacking. The purpose of this study was to measure the accessible membrane reservoir size for different membrane strain rates using membrane tethering techniques with atomic force microscopy. We conducted atomic force spectroscopy on isolated chondrocytes (n = 87). A micron-sized cantilever was used to extract membrane tethers from cell surfaces at constant pulling rates. Membrane tethers could be identified as force plateaus in the resulting force-displacement curves. Six pulling rates were tested (1, 5, 10, 20, 40, and 80 μm/s). The size of the membrane reservoir, represented by the membrane tether surface areas, decreased exponentially with increasing pulling rates. The current results support our theoretical findings that chondrocytes exposed to impact loading die because of membrane ruptures caused by high tensile membrane strain rates. 相似文献
87.
Ashley Slocum Mike Burnham Paul Genest Adith Venkiteshwaran Dayue Chen Joseph Hughes 《Biotechnology and bioengineering》2013,110(1):229-239
Virus‐removal filtration technology is commonly used in the manufacturing process for biologics to remove potential viral contaminants. Virus‐removal filters designed for retaining parvovirus, one of the smallest mammalian viruses, are considered an industry standard as they can effectively remove broad ranges of viruses. It has long been observed that the performance of virus filters can be influenced by virus preparations used in the laboratory scale studies (PDA, 2010 ). However, it remains unclear exactly what quality attributes of virus preparations are critical or indicative of virus filter performance as measured by effectiveness of virus removal and filter capacity consistency. In an attempt to better understand the relationship between virus preparation and virus filter performance, we have systematically prepared and analyzed different grades of parvovirus with different purity levels and compared their performance profiles on Viresolve® Pro parvovirus filters using four different molecules. Virus preparations used in the studies were characterized using various methods to measure DNA and protein content as well as the hydrodynamic diameter of virus particles. Our results indicate that the performance of Viresolve® Pro filters can be significantly impacted depending on the purity of the virus preparations used in the spike and recovery studies. More importantly, we have demonstrated that the purity of virus preparations is directly correlated to the measurable biochemical and biophysical properties of the virus preparations such as DNA and protein content and monodispersal status, thus making it possible to significantly improve the consistency and predictability of the virus filter performance during process step validations. Biotechnol. Bioeng. 2013; 110: 229–239. © 2012 Wiley Periodicals, Inc. 相似文献
88.
Benjamin D. Stevens John Litchfield Jeffrey A. Pfefferkorn Karen Atkinson Christian Perreault Paul Amor Kevin Bahnck Martin A. Berliner Jessica Calloway Anthony Carlo David R. Derksen Kevin J. Filipski Mike Gumkowski Charanjeet Jassal Margit MacDougall Brendan Murphy Paul Nkansah John Pettersen Yan Zhang 《Bioorganic & medicinal chemistry letters》2013,23(24):6588-6592
Glucokinase (hexokinase IV) continues to be a compelling target for the treatment of type 2 diabetes given the wealth of supporting human genetics data and numerous reports of robust clinical glucose lowering in patients treated with small molecule allosteric activators. Recent work has demonstrated the ability of hepatoselective activators to deliver glucose lowering efficacy with minimal risk of hypoglycemia. While orally administered agents require a considerable degree of passive permeability to promote suitable exposures, there is no such restriction on intravenously delivered drugs. Therefore, minimization of membrane diffusion in the context of an intravenously agent should ensure optimal hepatic targeting and therapeutic index. This work details the identification a hepatoselective GKA exhibiting the aforementioned properties. 相似文献
89.
Matthew R. Evans Mike Bithell Stephen J. Cornell Sasha R. X. Dall Sandra Díaz Stephen Emmott Bruno Ernande Volker Grimm David J. Hodgson Simon L. Lewis Georgina M. Mace Michael Morecroft Aristides Moustakas Eugene Murphy Tim Newbold K. J. Norris Owen Petchey Matthew Smith Justin M. J. Travis Tim G. Benton 《Proceedings. Biological sciences / The Royal Society》2013,280(1771)
Human societies, and their well-being, depend to a significant extent on the state of the ecosystems that surround them. These ecosystems are changing rapidly usually in response to anthropogenic changes in the environment. To determine the likely impact of environmental change on ecosystems and the best ways to manage them, it would be desirable to be able to predict their future states. We present a proposal to develop the paradigm of predictive systems ecology, explicitly to understand and predict the properties and behaviour of ecological systems. We discuss the necessary and desirable features of predictive systems ecology models. There are places where predictive systems ecology is already being practised and we summarize a range of terrestrial and marine examples. Significant challenges remain but we suggest that ecology would benefit both as a scientific discipline and increase its impact in society if it were to embrace the need to become more predictive. 相似文献
90.
Calliandra B. Harris Winyoo Chowanadisai Darya O. Mishchuk Mike A. Satre Carolyn M. Slupsky Robert B. Rucker 《The Journal of nutritional biochemistry》2013,24(12):2076-2084
Pyrroloquinoline quinone (PQQ) influences energy-related metabolism and neurologic functions in animals. The mechanism of action involves interactions with cell signaling pathways and mitochondrial function. However, little is known about the response to PQQ in humans. Using a crossover study design, 10 subjects (5 females, 5 males) ingested PQQ added to a fruit-flavored drink in two separate studies. In study 1, PQQ was given in a single dose (0.2 mg PQQ/kg). Multiple measurements of plasma and urine PQQ levels and changes in antioxidant potential [based on total peroxyl radical-trapping potential and thiobarbituric acid reactive product (TBAR) assays] were made throughout the period of 48 h. In study 2, PQQ was administered as a daily dose (0.3 mg PQQ/kg). After 76 h, measurements included indices of inflammation [plasma C-reactive protein, interleukin (IL)-6 levels], standard clinical indices (e.g., cholesterol, glucose, high-density lipoprotein, low-density lipoprotein, triglycerides, etc.) and 1H-nuclear magnetic resonance estimates of urinary metabolites related in part to oxidative metabolism. The standard clinical indices were normal and not altered by PQQ supplementation. However, dietary PQQ exposure (Study 1) resulted in apparent changes in antioxidant potential based on malonaldehyde-related TBAR assessments. In Study 2, PQQ supplementation resulted in significant decreases in the levels of plasma C-reactive protein, IL-6 and urinary methylated amines such as trimethylamine N-oxide, and changes in urinary metabolites consistent with enhanced mitochondria-related functions. The data are among the first to link systemic effects of PQQ in animals to corresponding effects in humans. 相似文献