Phytoplankton response to changed nutrient level in Lake Peipsi (Estonia) in 1992–2001

To clarify the sediment yield processes following a disturbance by a forest fire in a mountainous catchment, and considering the hydrological and geomorphological processes in the headwater, we measured bedload sediment yield at rainfall events in disturbed and secondary forest catchments in the western part of Japan. The three catchments were under different hydrogeological conditions. The IK, TB and TY catchments were disturbed by forest fires in 2000, 1994, and 1978, respectively. In the IK catchment, although runoff response to rainfall was fastest with high peak flows, the catchment also had the highest base flow. Moreover, the annual sediment yield there was about ten times as high as in the other two catchments, and it was found that there was a steep linear curve in the relationship between precipitation and bedload sediment yield. This is thought to be caused by overland flow generation following water repellency on the slopes, and by the accumulated sediment that forms the thick soil layer on the valley bottom. On the other hand, in the TB catchment runoff experienced high peak flows at rainfall events and low base flows, and there was a gradual linear curve in the precipitation–sediment yield relationship. This might be the result of there being a thin soil layer on the hillslope and on the valley bottom because of successive erosion after the fire. In the TY catchment, runoff had a low peak flow at rainfall events and a high base flow; and the bedload sediment yield increased exponentially with increasing precipitation. Therefore, sediment yield in the TB catchment was more than that in the TY during storm events with precipitation of less than 100 mm, whereas it was the opposite during heavier rainfalls. It indicates that there is a thick soil layer on the slope and a thin soil layer on the valley bottom in the TY catchment following the recovering of vegetation, and that the sediment yield process predominates only during big rainfall events, only then does subsurface flow generate.     

Identification of the origin of an Atlantic salmon (Salmo salar L.) population in a recently recolonized river in the Baltic Sea

The founder event in a recently recolonized salmon population in the Baltic Sea (Gulf of Finland) was investigated. To identify the origin of the founders, four wild populations and two hatchery stocks were analysed using six microsatellite loci. The results of assignment tests and factorial correspondence analysis suggest that the initial recolonizers of the river Selja originated from the geographically nearest (7 km) wild population (river Kunda) but as the result of stocking activities, interbreeding between recolonizers and hatchery individuals has occurred in subsequent years. Although the hatchery releases are outnumbering the wild salmon recruitment in the Baltic Sea at present, our results suggest that the native populations may still have an important role in colonization processes of the former salmon rivers.     

Design, synthesis and properties of novel powerful antioxidants, glutathione analogues

Glutathione (GSH) is the major low-molecular weight antioxidant in mammalian cells. Thus, its analogues carrying similar and/or additional positive properties might have clinical perspectives. Here, we report the design and synthesis of a library of tetrapeptidic GSH analogues called UPF peptides. Compared to cellular GSH our designed peptidic analogues showed remarkably higher hydroxyl radical scavenging ability (EC(50) of GSH: 1,231.0 +/- 311.8 microM; EC(50) of UPF peptides: from 0.03 to 35 microM) and improved antiradical efficiency towards a stable alpha,alpha-diphenyl-beta-picrylhydrazyl (DPPH) radical. The best of UPF peptides was 370-fold effective hydroxyl radical scavengers than melatonin (EC(50): 11.4 +/- 1.0 microM). We also found that UPF peptides do not influence the viability and membrane integrity of K562 human erythroleukemia cells even at 200 microM concentration. Dimerization of GSH and UPF peptides was compared in water and in 0.9% saline solutions. The results, together with an earlier finding that UPF1 showed protective effects in global cerebral ischemia model in rats, suggest that UPF peptides might serve both as potent antioxidants as well as leads for design of powerful non-peptidic antioxidants that correct oxidative stress-driven events.     

Impacts of climate warming on the long-term dynamics of key fish species in 24 European lakes

Fish play a key role in the trophic dynamics of lakes. With climate warming, complex changes in fish assemblage structure may be expected owing to direct effects of temperature and indirect effects operating through eutrophication, water level changes, stratification and salinisation. We reviewed published and new long-term (10–100 years) fish data series from 24 European lakes (area: 0.04–5,648 km²; mean depth: 1–177 m; a north–south gradient from Sweden to Spain). Along with an annual temperature increase of about 0.15–0.3°C per decade profound changes have occurred in either fish assemblage composition, body size and/or age structure during recent decades and a shift towards higher dominance of eurythermal species. These shifts have occurred despite a reduction in nutrient loading in many of the lakes that should have benefited the larger-sized individuals and the fish species typically inhabiting cold-water, low-nutrient lakes. The cold-stenothermic Arctic charr has been particularly affected and its abundance has decreased in the majority of the lakes where its presence was recorded. The harvest of cool-stenothermal brown trout has decreased substantially in two southern lakes. Vendace, whitefish and smelt show a different response depending on lake depth and latitude. Perch has apparently been stimulated in the north, with stronger year classes in warm years, but its abundance has declined in the southern Lake Maggiore, Italy. Where introduced, roach seems to take advantage of the higher temperature after years of low population densities. Eurythermal species such as common bream, pike–perch and/or shad are apparently on the increase in several of the lakes. The response of fish to the warming has been surprisingly strong and fast in recent decades, making them ideal sentinels for detecting and documenting climate-induced modifications of freshwater ecosystems.     

Intestinal Lactobacillus sp. is associated with some cellular and metabolic characteristics of blood in elderly people

The higher counts or particular groups (Firmicutes/Bacteroidetes) of intestinal microbiota are related to host metabolic reactions, supporting a balance of human ecosystem. We further explored whether intestinal lactobacilli were associated with some principal cellular and metabolic markers of blood in 38 healthy >65-year-old persons. The questionnaire, routine clinical and laboratory data of blood indices as much as the oxidized low-density lipoprotein (ox-LDL) and baseline diene conjugates in low-density lipoprotein (BDC-LDL) of blood sera were explored. The PCR-based intestinal Lactobacillus sp. composition and counts of cultivable lactobacilli (LAB) were tested. The facultative heterofermentative lactobacilli (Lactobacillus casei and Lactobacillus paracasei) were the most frequent (89 and 97%, respectively) species found, while Lactobacillus acidophilus, Lactobacillus plantarum and Lactobacillus reuteri were present in almost half of the elderly persons. The number of species simultaneously colonizing the individuals ranged from 1 to 7 (median 4). In elderly consuming probiotics the LAB counts were significantly higher than in these not consuming (median 7.8, range 4.2–10.8 vs. median 6.3, range 3.3–9.7 log cfu/g; p = 0.005), adjusted (OR = 1.71, CI95 1.04–2.82; p = 0.035) for age and body mass index (BMI). The colonization by L. acidophilus was negatively related (r = ?0.367, p = 0.0275) to L. reuteri, staying significant after adjusting for age, sex and BMI (OR = 0.16, CI95 0.04–0.73; p = 0.018). However, the blood glucose concentration showed a tendency for a negative correlation for colonization with Lactobacillus fermentum (r = ?0.309, p = 0.062) adjusted for BMI (Adj. R² = 0.181; p = 0.013) but not for age and sex. The higher white blood cells (WBC) count was positively related (r = 0.434, p = 0.007) to presence of Lactobacillus reuteri adjusted for age, sex and BMI (Adj. R² = 0.193, p = 0.027). The lower values of ox-LDL were predicted by higher counts of cultivable lactobacilli adjusted by sex, age and BMI (r = ?0.389, p = 0.016; Adj. R² = 0.184 p = 0.029). In conclusion, the pilot study of elderly persons shows that the intestinal lactobacilli are tightly associated with WBC count, blood glucose and content of ox-LDL which all serve as risk markers in pathogenesis of inflammation, metabolic syndrome and cardiovascular disease (CVD).     

Changes in the water level of Lake Peipsi and their reflection in a sediment core

A comprehensive study (chronological, lithological and geochemical) of an 8.5 m postglacial sediment sequence from Lake Peipsi was conducted to elucidate the effects of lake-level changes on the sedimentary environment and biogeochemical dynamics in a large lake. Four lithological units were distinguished in the sediment sequence studied: clayey silt, slightly laminated greyish carbonaceous gyttja, brownish-grey gyttja and dark gyttja. These units indicate that large shifts in sedimentation processes occurred in the past. The sediment data show that fluctuations in water depth had a profound impact on the lake environment, recorded as changes in the lithological composition, phosphorus content of sediments and composition of diatom assemblages. The corresponding changes are best reflected in sediments accumulated during phases of regression when the lake area was also smaller. As the water depth and area of the lake increased, wave-induced erosion and resedimentation smoothed or even disturbed the initial information. The increase of phosphorus content in the unconsolidated, high-porosity surface sediments (0.5 m) is most probably connected with active diffusion and matter exchange between the water-sediment pools.     

Diet patterns and ontogenetic diet shift of pikeperch, <Emphasis Type="Italic">Sander lucioperca</Emphasis> (L.) fry in lakes Peipsi and Võrtsjärv (Estonia)

Pikeperch is a major predator in the pelagic zone of eutrophic waters, such as the large north-temperate lowland lakes Võrtsjärv (Estonia) and Peipsi (Estonia/Russia). The size and structure of the pikeperch population is strongly influenced by their success at the juvenile stage. Therefore, we investigated the diet and prey selection of pikeperch fry caught in the ice-free period in lakes Peipsi and Võrtsjärv in 2007 and 2008. We analysed the stomach contents of 635 pikeperch from Lake Peipsi and 202 pikeperch from Lake Võrtsjärv, and compared our findings with similar data from the 1950s (Erm, About Biological and Morphological Differences of Pikeperch. Hydrobiological Researches II (in Estonian), 1961). Analysing 4–20 cm long fry, we studied differences in prey size, seasonal diet patterns and the ontogenetic diet shift. In both lakes, 0+ pikeperch feed mostly on large predatory zooplankters. However, in Lake Peipsi the stomach content weight and the average number of food items in stomach were higher, and the food spectrum was wider than in Lake Võrtsjärv. There was also a difference in the type of food that dominated fry’s stomach content (calculated by weight) in the two lakes. In Lake Peipsi, chironomids larvae, as well as zooplankters Daphnia galeata and Bythotrephes longimanus dominated, while in Lake Võrtsjärv zooplankters Mesocyclops leuckarti and Leptodora kindti. Seasonal analysis showed that cladocerans dominated in pikeperch fry stomach content in summer and at the beginning of September, but copepods were dominant in autumn and spring. In contrast to the studies carried out from 1952 to 1958 (Erm, About Biological and Morphological Differences of Pikeperch. Hydrobiological Researches II (in Estonian), 1961), the shift from planktivory to piscivory at the end of the first growing season was hardly ever observed during our investigation. We believe this is due to the lack of suitable prey fish as there was a collapse of the smelt, Osmerus eperlanus (L.), population in both lakes. The transition of pikeperch from planktivory to piscivory was delayed till the next summer.     

Engagement of the ATR-Dependent DNA Damage Response at the Human Papillomavirus 18 Replication Centers during the Initial Amplification

We have previously demonstrated that the human papillomavirus (HPV) genome replicates effectively in U2OS cells after transfection using electroporation. The transient extrachromosomal replication, stable maintenance, and late amplification of the viral genome could be studied for high- and low-risk mucosal and cutaneous papillomaviruses. Recent findings indicate that the cellular DNA damage response (DDR) is activated during the HPV life cycle and that the viral replication protein E1 might play a role in this process. We used a U2OS cell-based system to study E1-dependent DDR activation and the involvement of these pathways in viral transient replication. We demonstrated that the E1 protein could cause double-strand DNA breaks in the host genome by directly interacting with DNA. This activity leads to the induction of an ATM-dependent signaling cascade and cell cycle arrest in the S and G₂ phases. However, the transient replication of HPV genomes in U2OS cells induces the ATR-dependent pathway, as shown by the accumulation of γH2AX, ATR-interacting protein (ATRIP), and topoisomerase IIβ-binding protein 1 (TopBP1) in viral replication centers. Viral oncogenes do not play a role in this activation, which is induced only through DNA replication or by replication proteins E1 and E2. The ATR pathway in viral replication centers is likely activated through DNA replication stress and might play an important role in engaging cellular DNA repair/recombination machinery for effective replication of the viral genome upon active amplification.     

Evaluation of afforestation development and natural colonization on a reclaimed mine site

Post‐mining restoration sites often develop novel ecosystems as soil conditions are completely new and ecosystem assemblage can be spontaneous even on afforested sites. This study presents results from long‐term monitoring and evaluation of an afforested oil‐shale quarry in Estonia. The study is based on chronosequence data of soil and vegetation and comparisons are made to similar forest site‐types used in forest management in Estonia. After site reclamation, soil development lowered pH and increased N, K, and organic C content in soil to levels similar to the common Hepatica forest site‐type but P, total C, and pH were more similar to the Calamagrostis forest site‐type. Vegetation of the restoration area differed from that on common forest sites; forest stand development was similar to the Hepatica forest‐type. A variety of species were present that are representive of dry and wet sites, as well as infertile and fertile sites. It appears that novel ecosystems may be developing on post‐mining reclaimed land in Northeast Estonia and may require adaptations to typical forest management regimes that have been based on site‐types. Monitoring and evaluation gives an opportunity to plan further management activities on these areas.