A new facultatively nitrite oxidizing bacterium,Nitrobacter vulgaris sp. nov.

A total of 17 facultatively lithoautotrophic strains of Nitrobacter were investigated. They all were found to be related on the species level by DNA hybridizations. The G+C content of DNA ranged between 58.9 and 59.9 mol %. The isolates originated from divers environments. The cells were 0.5–0.8×1.2–2.0 m in size and motile by one polar to subpolar flagellum. Cell-division normally occurred by budding. Polar caps of intracytoplasmic membranes as well as carboxysomes were present. The cells tended to excrete extracellular polymers forming aggregates or biofilms. Heterotrophic growth was slower than mixotrophic but often faster than litoautotrophic growth. In the presence of nitrite and organic substances the organisms often showed diphasic growth. First nitrite and then the organic material was oxidized. In the absence of oxygen growth was possible by dissimilatory nitrate reduction. Nitrite, nitric and nitrous oxide as well as ammonia were formed. Depending on growth conditions the generation times varied from 12 to 140 h. The new Nitrobacter spec. may be one of the most abundant nitrite-oxidizing bacteria in soils, fresh waters and natural as well as artificial stones. For this organism the name Nitrobacter vulgaris is proposed.The type strain is filed with the culture collection of the Institut für Allgemeine Botanik, Universität Hamburg, FRG.     

Regulation of human T cell leukemia virus expression

Retroviruses of the type C morphology have been implicated in a wide variety of diseases in animals and humans. The human T cell leukemia viruses types I (HTLV-I) and II (HTLV-II), the prototypic human-type C retroviruses, have been identified as the causative agents of some forms of human leukemia and neurological disorders. The genetic structure and regulation of the HTLVs are more complex than their avian and murine leukemia virus counterparts. In addition to the gag, pol, and env genes that encode the characteristic virion proteins of all replication competent retroviruses, the genomes of HTLV encode the non-structural proteins, Tax and Rex, which are required for regulating viral gene expression. To understand what appears to be a complex mechanism of disease induction by HTLV, elucidating the regulation and function of the viral gene products and the interaction of these products with each other, as well as with cellular factors, will be critical. This review focuses primarily on regulation of HTLV gene expression in the infected human T lymphocyte, but also discusses analogous gene regulation by the human immunodeficiency virus (HIV). It concentrates specifically on the role these gene products play in virus replication and, ultimately, pathogenesis.     

Internal seiches in Lake Constance: influence on plankton abundance at a fixed sampling site

During thermal stratification, pronounced internal seiches occurin Lake Constance with periods of 4–6 days The amplitudesreach 12 m at the sampling site in berlinger See (northwesternpart of Lake Constance). Seiches change the thickness of thewarm and generally biologically rich epilimnion and, thus, alsothe areal abundance of planktonic organisms at a fixed samplingsite. The potential impact of seiche-dnven changes of epilimneticthickness on observed plankton abundance was calculated usingcontinuously recorded temperature profiles and weekly verticalprofiles of plankton biomass. Observed plankton biomass wasrecalculated by taking into account the effect of changing layerthickness in order to give a more realistic picture of biomasschanges caused by waxing and waning of populations Our calculationsimply that changes of strata thickness do not mask the generalseasonal trend in population dynamics (e g. spring bloom andclear water phase), estimates of average yearly standing stockare not significantly affected if sampling is done at leastweekly. However, changes of strata thickness can alter arealplankton abundance at the sampling site by a factor of 2 within2 days During pronounced seiches, areal abundance of phytoplankton,which generally exhibit a stronger vertical gradient than-mostother plankton, may be changed by a factor of 3–4 withinhours Hence, at our sampling site, the impact of changes instrata thickness cannot be ignored for detailed analysis ofpopulation dynamics of autotrophs involving comparisons betweensingle observations     

Stimulation of insulin release from pancreatic islets by quinones

Coenzyme Q (CoQ₀) and other quinones were shown to be potent insulin secretagogues in the isolated pancreatic islet. The order of potency was CoQ₀benzoquinonehydroquinonemenadione. CoQ₆ and CoQ₁₀ (ubiquinone), duroquinone and durohydroquinone did not stimulate insulin release. CoQ₀'s insulinotropism was enhanced in calcium-free medium and CoQ₀ appeared to stimulate only the second phase of insulin release. CoQ₀ inhibited inositol mono-, bis- and trisphosphate formation. Inhibitors of mitochondrial respiration (rotenone, antimycin A, FCCP and cyanide) and the calcium channel blocker verapamil, did not inhibit CoQ₀-induced insulin release. Dicumarol, an inhibitor of quinone reductase, did not inhibit CoQ₀-induced insulin release, but it did inhibit glucose-induced insulin release suggesting that the enzyme and quinones play a role in glucose-induced insulin release. Quinones may stimulate insulin release by mimicking physiologically-occuring quinones, such as CoQ₁₀, by acting on the plasma membrane or in the cytosol. Exogenous quinones may bypass the quinone reductase reaction, as well as many reactions important for exocytosis.     

The Isolation and Evaluation of Two Naturally Occurring Mild Strains of Vanilla Necrosis Potyvirus for Control by Cross-Protection

In an attempt to find mild virus strains that would cross-protect sgainst vanilla necrosis potyvirus (VNPV), Vanilla fragrans plants in Tonga were surveyed for the presence of mild or symptomless potyvirus infections. Potyviruses were detected by indirect ELISA using a commercially available portyvirus group monoclonal anibody. From 28 plants with mild or symptomless infections two portyvirus isolates, designated V1 and V3, included systemic infections in Nicotiana benthamiana following mechanical inoculation. V1, which causes a mild mottle in N. benthamiana, is serologically related to VNPV, while V3 which causes mild vein banding is serologically unrelated to VNPV. Prior inoculation with V1 protected N. benthamiana against the severe mosaic symptoms of VNPV when challenge inoculated after 14 and 21 days, but not after 7 days. When V3 was used as the protecting strain, cross-protection was observed in some, but not all plants, when chalenged with VNPV after 14 and 21 days.     

Whole-embryo culture of Drosophila : development of embryonic tissues in vitro

Summary We have devised techniques to culture whole, dissected embryos of Drosophila melanogaster. We examine multiple aspects of the morphological and physiological development of the epidermis, musculature, nervous system, and internal organs in this cultured preparation, and show that in vitro development closely parallels normal embryogenesis. These techniques permit a wide range of experimental manipulations during embryogenesis and allow us to extend observations through late embryonic stages, after cuticle deposition. Applications of this technique are presented.     

Packaging and unpackaging the sea urchin sperm genome.

Two species of histones in sea urchin sperm (Sp H1 and Sp H2B) are chimeric molecules whose highly basic amino-terminal domains are dephosphorylated at the last stage of sperm cell differentiation, and rephosphorylated immediately following fertilization. The phosphorylated regions consist largely of repeating tetrapeptides with two basic residues flanking Ser-Pro residues ('SPKK' motifs) and are predicted to have beta-turn secondary structures. Alteration of the charge and structure of the SPKK sites may play a role in the unusually dense DNA packaging of the mature sperm chromatin. The motif resembles the target site of cell-cycle-associated cdc2 kinases and is found in several other proteins whose nucleic acid affinities may be altered during the cell cycle.