Use of an IgG fragment prepared with particulate plasmin to study the C1 binding and activation.

Facb, fragment antigen and complement binding (this last property is shown when the fragment is involved in an immune complex); Fc, C-terminal half of the heavy-chain dimer; pFc′, major C-terminal fragment released from IgG by pepsin or plasmin digestion; DFP, diisopropylphosphofluoridate; ATEE, N-acetyl-L-tyrosine ethyl ester; BAEE, N-benzoyl-L-arginine ethyl ester; TAME, p-toluene sulfonyl-L-arginine methyl ester; SDS, sodium dodecyl sulfate; SBTI, soybean trypsin inhibitor.The nomenclature of the complement components (C1, C1q, C1r, C1s) follows the W.H.O. recommendations. Enzymatic activities are expressed in nanokatals (nkat.) as recommended in the Enzyme Nomenclature (1973).     

Attenuation by catecholamine antagonists of the hypothermia that follows cerebral infarction in gerbils.

The hypothermia that follows induction of cerebral infraction in gerbils can be attenuated by drugs which reduce the interactions between endogenous brain catecholamines and postsynaptic receptors. This observation is compatible with the hypothesis that stroke-induced hypothermia is mediated, in part, by the release of catecholamines from ischemic neurons.     

Structures of nonsense-mediated mRNA decay factors UPF3B and UPF3A in complex with UPF2 reveal molecular basis for competitive binding and for neurodevelopmental disorder-causing mutation

UPF3 is a key nonsense-mediated mRNA decay (NMD) factor required for mRNA surveillance and eukaryotic gene expression regulation. UPF3 exists as two paralogs (A and B) which are differentially expressed depending on cell type and developmental stage and believed to regulate NMD activity based on cellular requirements. UPF3B mutations cause intellectual disability. The underlying molecular mechanisms remain elusive, as many of the mutations lie in the poorly characterized middle-domain of UPF3B. Here, we show that UPF3A and UPF3B share structural and functional homology to paraspeckle proteins comprising an RNA-recognition motif-like domain (RRM-L), a NONA/paraspeckle-like domain (NOPS-L), and extended α-helical domain. These domains are essential for RNA/ribosome-binding, RNA-induced oligomerization and UPF2 interaction. Structures of UPF2′s third middle-domain of eukaryotic initiation factor 4G (MIF4GIII) in complex with either UPF3B or UPF3A reveal unexpectedly intimate binding interfaces. UPF3B’s disease-causing mutation Y160D in the NOPS-L domain displaces Y160 from a hydrophobic cleft in UPF2 reducing the binding affinity ∼40-fold compared to wildtype. UPF3A, which is upregulated in patients with the UPF3B-Y160D mutation, binds UPF2 with ∼10-fold higher affinity than UPF3B reliant mainly on NOPS-L residues. Our characterization of RNA- and UPF2-binding by UPF3′s middle-domain elucidates its essential role in NMD.     

Secondary production and richness of native and non-native macroinvertebrates are driven by human-altered shoreline morphology in a large river

Animals living in extreme environments with predictable seasonality may have important life history events correlated to favourable periods. These animals pass critical life stages in protected habitats, especially during early life, often receiving parental care. It is thus hypothesized that juveniles rely on protective microhabitats provided by their parents, becoming independent only during favourable seasons. Semi-terrestrial crayfish Parastacus pugnax inhabit burrows in highly seasonal and predictable environments, thus being well suited to test this hypothesis. Following marked burrows and individual crayfish we examined the life history patterns of P. pugnax in their natural environment to test the predictions that (i) burrowing activity is higher during the wet season, (ii) reproductive events occur during favourable seasons and (iii) juveniles only disperse after reaching larger sizes. There was little or no burrowing activity during the dry season, when soil was more compact, but burrows became wider and had more openings during the wet season. After hatching, juveniles cohabited with adults for at least 4 months during the dry season. During this period juveniles grew considerably, starting independent lives during the wet season. These results suggest that the prolonged parent-offspring cohabitation evolved in response to the predictable seasonal variations in the crayfish habitat.