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J?rn Bennewitz Juha Kantanen Ilma Tapio Meng Hua Li Ernst Kalm Johanna Vilkki Innokentyi Ammosov Zoya Ivanova Tatyana Kiselyova Ruslan Popov Theo HE Meuwissen 《遗传、选种与进化》2006,38(2):201-220
Extinction of breeds threatens genetic diversity of livestock species. The need to conserve genetic diversity is widely accepted but involves in general two questions: (i) is the expected loss of diversity in a set of breeds within a defined future time horizon large enough to establish a conservation plan, and if so (ii) which breeds should be prioritised for such a conservation plan? The present study uses a marker assisted methodology to address these questions. The methodology combines core set diversity measures with a stochastic method for the estimation of expected future diversity and breed marginal diversities. The latter is defined as the change in the total diversity of all breeds caused by a one unit decrease in extinction probability of a particular breed. The stochastic method was validated by means of simulations. A large field data set consisting of 44 North Eurasian cattle breeds was analysed using simplified determined extinction probabilities. The results show that the expected loss of diversity in this set within the next 20 to 50 years is between 1 and 3% of the actual diversity, provided that the extinction probabilities which were used are approximately valid. If this loss is to be reduced, it is sufficient to include those three to five breeds with the highest marginal diversity in a conservation scheme. 相似文献
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BACKGROUND AND AIMS: Physiological and architectural plant models have originally been developed for different purposes and therefore have little in common, thus making combined applications difficult. There is, however, an increasing demand for crop models that simulate the genetic and resource-dependent variability of plant geometry and architecture, because man is increasingly able to transform plant production systems through combined genetic and environmental engineering. MODEL: GREENLAB is presented, a mathematical plant model that simulates interactions between plant structure and function. Dual-scale automaton is used to simulate plant organogenesis from germination to maturity on the basis of organogenetic growth cycles that have constant thermal time. Plant fresh biomass production is computed from transpiration, assuming transpiration efficiency to be constant and atmospheric demand to be the driving force, under non-limiting water supply. The fresh biomass is then distributed among expanding organs according to their relative demand. Demand for organ growth is estimated from allometric relationships (e.g. leaf surface to weight ratios) and kinetics of potential growth rate for each organ type. These are obtained through parameter optimization against empirical, morphological data sets by running the model in inverted mode. Potential growth rates are then used as estimates of relative sink strength in the model. These and other 'hidden' plant parameters are calibrated using the non-linear, least-square method. KEY RESULTS AND CONCLUSIONS: The model reproduced accurately the dynamics of plant growth, architecture and geometry of various annual and woody plants, enabling 3D visualization. It was also able to simulate the variability of leaf size on the plant and compensatory growth following pruning, as a result of internal competition for resources. The potential of the model's underlying concepts to predict the plant's phenotypic plasticity is discussed. 相似文献
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Epitope mapping of the major capsid protein of type 2 porcine circovirus (PCV2) by using chimeric PCV1 and PCV2 总被引:13,自引:0,他引:13 下载免费PDF全文
Lekcharoensuk P Morozov I Paul PS Thangthumniyom N Wajjawalku W Meng XJ 《Journal of virology》2004,78(15):8135-8145
Type 2 porcine circovirus (PCV2) is associated with postweaning multisystemic wasting syndrome in pigs, whereas the genetically related type 1 PCV (PCV1) is nonpathogenic. In this study, seven monoclonal antibodies (MAbs) against PCV2-ORF2 capsid protein were generated, biologically characterized, and subsequently used to map the antigenic sites of PCV2 capsid protein by using infectious PCV DNA clones containing PCV1/PCV2-ORF2 chimeras. The PCV1/PCV2-ORF2 chimeras were constructed by serial deletions of PCV2-ORF2 and replacement with the corresponding sequences of the PCV1-ORF2. The reactivities of chimeric PCV1/PCV2 clones in transfected PK-15 cells with the seven MAbs were detected by an immunofluorescence assay (IFA). The chimera (r140) with a deletion of 47 amino acids at the N terminus of PCV2-ORF2 reacted strongly to all seven MAbs. Expanding the deletion of PCV2-ORF2 from residues 47 to 57 (r175) abolished the recognition of MAb 3B7, 3C11, 4A10, 6H2, or 8F6 to the chimera. Further deletion of PCV2-ORF2 to 62 residues disrupted the binding of this chimera to all seven MAbs. IFA reactivities with all MAbs were absent when residues 165 to 233 at the C terminus of PCV2-ORF2 was replaced with that of PCV1-ORF2. Extending the sequence of PCV2-ORF2 from residues 165 (r464) to 185 (r526), 200 (r588), or 224 (r652) restored the ability of the three chimeras to react with MAbs 3C11, 6H2, 9H7, and 12G3 but not with 8F6, 3B7, or 4A10. When the four amino acids at the C terminus of r588 were replaced with that of PCV2-ORF2, the resulting chimera (r588F) reacted with all seven MAbs. The results from this study suggest that these seven MAbs recognized at least five different but overlapping conformational epitopes within residues 47 to 63 and 165 to 200 and the last four amino acids at the C terminus of the PCV2 capsid protein. 相似文献
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2006—2008年夏季(7—8月),对甘肃兴隆山自然保护区马麝(Moschus Sifanicus)的栖息地特征和夏季生境选择格局进行了研究。用Mann-Whitney U检验和χ2检验比较了马麝夏季利用生境样地(n=71)和对照性非利用样地(n=264)间的海拔等17个生态变量的差异,结果表明,兴隆山马麝夏季利用生境的郁闭度[(53.87±3.09)%]和乔木均高[(7.57±0.83)m]均显著大于非利用样地[郁闭度:(49.07±1.66)%,乔木均高:(6.33±0.32)m],喜食植物多度[(12.97±1.80)]株也显著大于非利用样地[(9.61±0.67)株]。此外,与非利用样地相比,兴隆山马麝夏季倾向于选择位于中坡位较陡(67.61%)、距离水源较近(<1000m,77.46%)、隐蔽度(88.73%)和避风性均较好(90%)及距人为干扰较远(>1000m,76.06%)的生境;主成分分析结果表明,前4个因子的累积贡献率达72.45%,由乔木胸径和乔木郁闭度变量组成的乔木因子是决定马麝夏季生境选择的首要因素,此外,海拔因子,由地表植被盖度和食物多度组成的食物因子,由灌木盖度、乔木密度和灌木... 相似文献
197.
Zheng-ke Zhan Kun-mei Ji Xiao-yu Liu Zhi-gang Liu Meng Li Jia-jie Chen Jia-na Li Shi Qiu 《Experimental & applied acarology》2010,52(1):63-71
Home dust mite derived materials are known to be a major source of problematic inhalant allergens. The aim of this study was
to determine the localization of the group 3 allergen, Der f 3, within Dermatophagoides farinae, in order to assess the relative importance of excreted materials and nonexcreted body components as allergen sources. Recombinant
Der f 3 (rDer f 3) was expressed in bacteria and purified as an immunogen for production of monoclonal antibodies (mAb) against
it. Dermatophagoides farinae mites and their faecal pellets were embedded in paraffin, and serial sections were immunoprobed with mAb clone 3D3 against
Der f 3. D. farinae midgut mucosa, gut contents and faecal pellets were strongly immunopositive for Der f 3. Der f 3 immunoreactive products
were not detected in any other internal organs of the mite. These results suggest that Der f 3 allergen may be synthesized
in and secreted from the digestive tract and excreted from the mite’s body in the faecal pellets. 相似文献
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Duan S. B. Wei S. S. Wang H. M. Ding S. H. Chen Y. Z. Tian J. J. Wang Y. J. Chen W. Chen J. Meng Q. L. 《Molecular Biology》2021,55(6):884-888
Molecular Biology - When expressing streptavidin recombinant polypeptide on magnetosomes (called bacterial magnetic nanoparticles, or BMPs), the presence of endogenous bacterial biotin might be... 相似文献