Integrated analysis reveals FOXA1 and Ku70/Ku80 as targets of ivermectin in prostate cancer

Ivermectin is a widely used antiparasitic drug and shows promising anticancer activity in various cancer types. Although multiple signaling pathways modulated by ivermectin have been identified in tumor cells, few studies have focused on the exact target of ivermectin. Herein, we report the pharmacological effects and targets of ivermectin in prostate cancer. Ivermectin caused G0/G1 cell cycle arrest, induced cell apoptosis and DNA damage, and decreased androgen receptor (AR) signaling in prostate cancer cells. Further in vivo analysis showed ivermectin could suppress 22RV1 xenograft progression. Using integrated omics profiling, including RNA-seq and thermal proteome profiling, the forkhead box protein A1 (FOXA1) and non-homologous end joining (NHEJ) repair executer Ku70/Ku80 were strongly suggested as direct targets of ivermectin in prostate cancer. The interaction of ivermectin and FOXA1 reduced the chromatin accessibility of AR signaling and the G0/G1 cell cycle regulator E2F1, leading to cell proliferation inhibition. The interaction of ivermectin and Ku70/Ku80 impaired the NHEJ repair ability. Cooperating with the downregulation of homologous recombination repair ability after AR signaling inhibition, ivermectin increased intracellular DNA double-strand breaks and finally triggered cell death. Our findings demonstrate the anticancer effect of ivermectin in prostate cancer, indicating that its use may be a new therapeutic approach for prostate cancer.Subject terms: Target identification, Endocrine cancer     

象山港网箱养殖区沉积物的古菌空间分布

对象山港网箱养殖区及其周边沉积物中古菌群落的空间分布进行研究,应用基于16S rRNA基因的T-RFLP(末端限制性片段多态性分析)技术分析象山港网箱养殖区及其周边不同深度沉积物中古菌的群落结构和多样性,并构建克隆文库进行系统发育学分析。测定沉积物各项理化因子,通过PCA和RDA分析了古菌群落分布及其与环境因子之间的关系。结果表明,泉古菌是港口沉积物中的优势古菌群,占古菌群落的50%以上。网箱养殖区沉积物的古菌群落结构较非养殖区简单,多样性降低。非养殖区古菌群落随深度呈现有规律的变化。营养盐类和pH是造成养殖区域古菌群落结构区别于非养殖区域的主要环境因素。     

Quantitative Proteomic Analysis Reveals Important Roles of the Acetylation of ER-Resident Molecular Chaperones for Conidiation in Fusarium oxysporum

Fusarium oxysporum is one of the most abundant and diverse fungal species found in soils and includes nonpathogenic, endophytic, and pathogenic strains affecting a broad range of plant and animal hosts. Conidiation is the major mode of reproduction in many filamentous fungi, but the regulation of this process is largely unknown. Lysine acetylation (Kac) is an evolutionarily conserved and widespread posttranslational modification implicated in regulation of multiple metabolic processes. A total of 62 upregulated and 49 downregulated Kac proteins were identified in sporulating mycelia versus nonsporulating mycelia of F. oxysporum. Diverse cellular proteins, including glycolytic enzymes, ribosomal proteins, and endoplasmic reticulum–resident molecular chaperones, were differentially acetylated in the sporulation process. Altered Kac levels of three endoplasmic reticulum–resident molecular chaperones, PDI^K70, HSP70^K604, and HSP40^K32 were identified that with important roles in F. oxysporum conidiation. Specifically, K70 acetylation (K70ac) was found to be crucial for maintaining stability and activity of protein disulphide isomerase and the K604ac of HSP70 and K32ac of HSP40 suppressed the detoxification ability of these heat shock proteins, resulting in higher levels of protein aggregation. During conidial formation, an increased level of PDI^K70ac and decreased levels of HSP70^K604ac and HSP40^K32ac contributed to the proper processing of unfolded proteins and eliminated protein aggregation, which is beneficial for dramatic cell biological remodeling during conidiation in F. oxysporum.     

Cytoplasmic domain and enzymatic activity of ACE2 are not required for PI4KB dependent endocytosis entry of SARS-CoV-2 into host cells

The recent COVID-19 pandemic poses a global health emergency. Cellular entry of the causative agent SARS-CoV-2 is mediated by its spike protein interacting with cellular receptor-human angiotensin converting enzyme 2 (ACE2). Here, by using lentivirus based pseudotypes bearing spike protein, we demonstrated that entry of SARS-CoV-2 into host cells was dependent on clathrin-mediated endocytosis, and phosphoinositides played essential roles during this process. In addition, we showed that the intracellular domain and the catalytic activity of ACE2 were not required for efficient virus entry. Finally, we showed that the current predominant Delta variant, although with high infectivity and high syncytium formation, also entered cells through clathrin-mediated endocytosis. These results provide new insights into SARS-CoV-2 cellular entry and present proof of principle that targeting viral entry could be an effective way to treat different variant infections.     

浙北地区常见绿化树种光合固碳特征

高固碳能力的树种选择是营造优质碳汇林,发展碳汇林业的重要基础工作.以浙北地区常见的30种造林绿化树种为研究材料,利用LI-6400便携式光合测定仪,测定树木光合日变化及不同光强梯度下光合作用的光响应特性,并根据实验观测值进行计算,对30个树种的日净固碳量和光合生理拟合参数进行Ward法聚类分析和因子分析.结果表明:香樟的固碳量最大((11.374±1.020) g·m-2·d-1),其次为碧桃、垂柳、石栎、无患子,固碳量最小的为红叶李((2.178±0.605) g·m-2·d-1),香樟和红叶李的日净固碳量有极显著差异(P＜0.01);树木的生理特性指标分析进一步反映了树种在浙北地区生长适应性及固碳能力大小,同时,根据树木的生理特性指标进行因子分析和聚类分析的结果,香樟、碧桃在浙北地区生长适应性较好,其次为无患子、垂柳、女贞等;根据树种固碳量及生理指标综合测定分析,建议在浙北地区造林绿化中可以优先选用香樟、碧桃、垂柳、无患子、石栎、女贞这些树种.     

2-苯乙醇对酿酒酵母生理生化特性影响

【目的】研究在不同浓度2-苯乙醇作用下,酵母生理生化特性的变化规律,为优化2-苯乙醇生物合成过程提供重要依据。【方法】透射电镜观察细胞形态;流式细胞术检测细胞膜渗透性、胞内ROS浓度、线粒体膜电位;实时荧光定量PCR检测关键酶基因表达。【结果】随着2-苯乙醇浓度增加(从0到4.0 g/L),酵母细胞分解代谢能力、细胞膜渗透性及aro10基因表达量逐渐降低;线粒体膜电位逐渐增加;胞内ROS浓度先增加后减少。当2-苯乙醇浓度从2.4 g/L增加到3.0 g/L,酵母的分解代谢能力、细胞膜渗透性、aro10基因表达水平等生理生化特性都发生较为显著的变化。【结论】产物原位转移过程中水相2-苯乙醇浓度可考虑控制在2.4 3.0 g/L。     

红松阔叶混交林林隙光量子通量密度、气温和空气相对湿度的时空分布格局

以小兴安岭原始红松阔叶混交林林隙为研究对象,通过对林隙内光量子通量密度(PPFD)、气温和空气相对湿度进行连续观测,比较其间的时空分布格局.结果表明：晴天和阴天阔叶红松林林隙的PPFD日最大值均出现在11:00—13:00,晴天林隙内各个时段最大值出现位置不同,日最大值出现在林隙北侧林冠边缘处;而阴天各个时段最大值均处于林隙的中心.林隙内月平均PPFD 为6月最高、9月最低,极差7月最大.林隙内晴天气温的峰值出现在9:00—15:00,而阴天气温峰值在15：00—19：00,均位于林隙中心南8 m.5:00—9:00林隙各点阴天的气温都高于晴天,9:00—19:00则相反.月平均气温为6月最高、9月最低.晴天和阴天空气相对湿度的峰值均出现在5:00—9:00,日最大值在林隙西侧林冠边缘处,且阴天的相对湿度始终大于晴天.月平均相对湿度为7月最高、6月最低.晴天PPFD的异质性大于阴天,而气温和相对湿度的异质性则不明显.生长季内不同月份PPFD、气温和空气相对湿度的最大值所处位置不同.PPFD和气温的月均值在林隙中心及附近变化梯度较大,而相对湿度的月均值则在林隙边缘变化梯度较大.     

Elevated CpG island methylation of GCK gene predicts the risk of type 2 diabetes in Chinese males

Background

The GCK gene encodes hexokinase 4, which catalyzes the first step in most glucose metabolism pathways. The purpose of our study is to assess the contribution of GCK methylation to type 2 diabetes (T2D).

Methods and results

GCK methylation was evaluated in 48 T2D cases and 48 age- and gender-matched controls using the bisulphite pyrosequencing technology. Among the four CpG sites in the methylation assay, CpG4 and the other three CpGs (CpG1-3) were not in high correlation (r < 0.5). Significantly elevated methylation levels of GCK CpG4 methylation were observed in T2D patients than in the healthy controls (P = 0.004). A breakdown analysis by gender indicated that the association between CpG4 methylation and T2D was specific to males (P = 0.002). It is intriguing that another significant male-specific association was also found between GCK CpG4 methylation and total cholesterol (TC) concentration (r = 0.304, P = 0.036).

Conclusion

Our results showed that elevated GCK CpG4 methylation might suggest a risk of T2D in Chinese males. Gender disparity in GCK CpG4 methylation might provide a clue to elaborate the pathogenesis of T2D.     

陕西食源性沙门氏菌耐药及相关基因

【目的】研究食源性沙门氏菌对常用抗生素的药敏性及相关耐药基因,更好的了解耐药性的产生和传播途径,确保食品安全。【方法】使用the Clinical and Laboratory Standards Institute推荐的琼脂稀释法测定沙门氏菌的药敏性,PCR和基因序列测定方法确定耐药沙门氏菌中整合子及其携带的耐药基因、与头孢菌素抗性相关的基因、沙门氏菌基因岛及与氟喹诺酮类抗生素耐药相关的基因突变。【结果】359株沙门氏菌中,67%的菌株对磺胺甲恶唑产生抗性,对甲氧苄啶/磺胺甲恶唑、四环素、卡那霉素、萘啶酮酸、氨苄西林、阿莫西林/克拉维酸、链霉素、氯霉素和庆大霉素、环丙沙星、头孢曲松、头孢西丁和头孢哌酮的耐药率分别为58%、56%、37%、35%、33%、32%、29%、26%、21%、16%、9%和8%。284株耐药菌中,79%的菌株可抗至少1种抗生素,25.9%可抗10种以上抗生素,2.5%可抗14种抗生素。耐药的Ⅰ类整合子以1.4kb最为常见,携带的耐药基因有aadA1、aadA2、aadA5、tetR、blaPSE-1、blaDHA-1、blaVEB-1、dhfrⅠ、dhfrⅤ、dhfrⅦ和dhfr17等。62株耐头孢曲松和/或头孢哌酮的沙门氏菌中,blaTEM和blaCMY-2基因的检出率分别为51.6%和56.5%。13.6%的沙门氏菌中检出了沙门氏菌基因岛。35株耐氟喹诺酮类抗生素的沙门氏菌的gyrA、parC和parE基因中共检出68个点突变,gyrA基因中常见突变为Ser83Phe、Ser83Tyr、Asp87Gly和Asp87Asn,parC基因中为Ser80Arg。parE基因中检出了Lys441Ile、Lys428Gln、Asp494Asn、Lys428Gln和Gly442Ser突变,这些点突变均为首次在食源性沙门氏菌中检出。【结论】陕西食源性沙门氏菌耐药状况严重,整合子、沙门氏菌基因岛和β-内酰胺酶编码基因的存在及解旋酶和拓扑异构酶基因突变是导致沙门氏菌耐药的重要机制。