Emergent macrophytes act selectively on ammonia-oxidizing bacteria and archaea

Ammonia-oxidizing bacteria (AOB) and archaea (AOA) were quantified in the sediments and roots of dominant macrophytes in eight neutral to alkaline coastal wetlands. The AOA dominated in most samples, but the bacterial-to-archaeal amoA gene ratios increased with increasing ammonium levels and pH in the sediments. For all plant species, the ratios increased on the root surface relative to the adjacent bulk sediment. This suggests that root surfaces in these environments provide conditions favoring enrichment of AOB.     

Six Serum miRNAs Fail to Validate as Myotonic Dystrophy Type 1 Biomarkers

Myotonic dystrophy type 1 (DM1) is an autosomal dominant genetic disease caused by expansion of a CTG microsatellite in the 3’ untranslated region of the DMPK gene. Despite characteristic muscular, cardiac, and neuropsychological symptoms, CTG trinucleotide repeats are unstable both in the somatic and germinal lines, making the age of onset, clinical presentation, and disease severity very variable. A molecular biomarker to stratify patients and to follow disease progression is, thus, an unmet medical need. Looking for a novel biomarker, and given that specific miRNAs have been found to be misregulated in DM1 heart and muscle tissues, we profiled the expression of 175 known serum miRNAs in DM1 samples. The differences detected between patients and controls were less than 2.6 fold for all of them and a selection of six candidate miRNAs, miR-103, miR-107, miR-21, miR-29a, miR-30c, and miR-652 all failed to show consistent differences in serum expression in subsequent validation experiments.     

Secretory trichomes,a substitutive floral nectar source in Lundia A. DC. (Bignoniaceae), a genus lacking a functional disc

This is the first report of corolla-borne secretory trichomes that substitute in role for a non-functional disc in a species of the neotropical genus Lundia A. DC. (Bignoniaceae). The floral biology and flowering phenology of Lundia cordata were investigated at two remnants of tropical rainforest in northeastern Brazil. This species is a typically omithophilous liana, with reddish, tubular, scentless flowers. The flowers are resupinate, protandrous and last for 2 d. There is a vestigial non-functional perigynous disc and nectar is secreted by glandular trichomes distributed along the internal surface of the corolla. The nectar is stored at the base of the corolla tube, thus showing secondary nectar presentation. The nectariferous trichomes are multi-cellular, uniseriate, with a basal foot cell rooting in the epidermis, one neck cell, and a glandular head with 13 cells on average. Three species of hummingbirds (Amazilia fimbriata, Eupetomena macroura and Phaethornis pretrei) serve as pollinators. Phaethornis ruber, Xylocopa bees, wasps and diurnal moths are considered nectar thieves.     

Functional gap junctions facilitate melanoma antigen transfer and cross-presentation between human dendritic cells

Previously, we found that human dendritic cells (hDCs) pulsed with a melanoma cell lysate (MCL) and stimulated with TNF-alpha (MCL/TNF) acquire a mature phenotype in vitro and are able to trigger tumor-specific immune responses when they are used in melanoma immunotherapy in patients. In this study, we describe that MCL/TNF induces gap junction (GJ)-mediated intercellular communications and promotes melanoma Ag transfer between ex vivo produced hDCs from melanoma patients. hDCs also exhibit increased expression of the GJ-related protein connexin 43, which contributes to GJ plaque formation after MCL/TNF stimulation. The addition of GJ inhibitors suppresses intercellular tumor Ag transfer between hDCs, thus reducing melanoma-specific T cell activation. In summary, we demonstrate that MCL/TNF-stimulated hDCs can establish functional GJ channels that participate in melanoma Ag transfer, facilitating Ag cross-presentation and an effective dendritic cell-mediated melanoma-specific T cell response. These results suggest that GJs formed between hDCs used in cancer vaccination protocols could be essentials for the establishment of a more efficient antitumor response.     

Phenology of woody species in tropical coastal vegetation, northeastern Brazil

The study was carried out in the Private Nature Reservation Nossa Senhora do Outeiro de Maracaípe, located along the southern coast of Pernambuco state, in the Nossa Senhora do Ó District (08°31′48″S and 35°01′05″W), Ipojuca municipality, northeastern Brazil. The reserve has 76.20 ha of tropical coastal vegetation (Restinga forest). The aims were to determine the existence of seasonal phenological pattern of woody species as a function of rainfall. During the study period, the rainfall was 26.8 mm in the driest month (November 2003) and 538.9 in the wettest (June 2004). Observations on flowering, fruiting, leaf fall, and leaf flushing were recorded monthly, during 16 months (April 2003 to July 2004). All species with a ground level perimeter >10 cm and represented by at least three individuals, were selected and tagged. A total of 51 species represented by 156 individuals were recorded. Leaf flushing and leaf fall did not have seasonal variation and the species continued to gain and loose leaves during the dry (August to February) and rainy (March to July) seasons. Flowering, when evaluated by the Fournier's percentage, varied between 1.9% and 20.2%, with maximum intensity in December 2003 (16.4%) and January 2004 (20.2%). Likewise, fruiting varied between 3.8% and 21.4% with the highest percentages in February (17.2%) and March (21.4%) 2004. The analysis comparing reproductive phenological patterns with monthly rainfall did not show a significant correlation, which may suggest investigations concerning other factors, including biotic ones, as pollination and/or dispersal modes, which can be influencing reproductive events of plants in the studied Restinga forest.     

Biosafety and risk assessment framework for selectable marker genes in transgenic crop plants: a case of the science not supporting the politics

Selectable marker gene systems are vital for the development of transgenic crops. Since the creation of the first transgenic plants in the early 1980s and their subsequent commercialization worldwide over almost an entire decade, antibiotic and herbicide resistance selectable marker gene systems have been an integral feature of plant genetic modification. Without them, creating transgenic crops is not feasible on purely economic and practical terms. These systems allow the relatively straightforward identification and selection of plants that have stably incorporated not only the marker genes but also genes of interest, for example herbicide tolerance and pest resistance. Bacterial antibiotic resistance genes are also crucial in molecular biology manipulations in the laboratory. An unprecedented debate has accompanied the development and commercialization of transgenic crops. Divergent policies and their implementation in the European Union on one hand and the rest of the world on the other (industrialized and developing countries alike), have resulted in disputes with serious consequences on agricultural policy, world trade and food security. A lot of research effort has been directed towards the development of marker-free transformation or systems to remove selectable markers. Such research has been in a large part motivated by perceived problems with antibiotic resistance selectable markers; however, it is not justified from a safety point of view. The aim of this review is to discuss in some detail the currently available scientific evidence that overwhelmingly argues for the safety of these marker gene systems. Our conclusion, supported by numerous studies, most of which are commissioned by some of the very parties that have taken a position against the use of antibiotic selectable marker gene systems, is that there is no scientific basis to argue against the use and presence of selectable marker genes as a class in transgenic plants.     

Divergent effects of leaf-cutting ant herbivory and soil engineering on the reproductive success of plants in a Caatinga dry forest

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