Antimicrobial activity of synthetic bactenecin

Bactenecin is an antimicrobial peptide isolated from bovine neutrophils. Bactenecin was synthesized by solid-phase peptide synthesis and renatured to a fully disulfide bonded form. The peptide inhibits the growth of Escherichia coli and Staphylococcus aureus at the same concentration reported for the peptide purified from bovine neutrophils. Bactenecin inhibits the growth of other medically important bacteria and yeast, and it kills the fungus Trichophyton rubrum. Acetylation and amidation of the amino- and carboxy-termini of bactenecin do not change its potency, while replacement of its two cysteine residues with serine decreases the potency.     

Chicken GnRH II occurs together with mammalian GnRH in a South American species of marsupial (Monodelphis domestica)

Two molecular forms of gonadotropin-releasing hormone (GnRH) were demonstrated in hypothalamic extracts of M. domestica using high performance liquid chromatography and radioimmunoassay with specific GnRH antisera. One form eluted in the same position as synthetic mammalian GnRH and was quantified equally by two mammalian GnRH antisera, while the second form coeluted with synthetic chicken GnRH II and was quantified equally with two chicken GnRH II antisera. The finding of chicken GnRH II in a South American species of marsupial, which has previously been reported in some Australian species of marsupial and in species of Aves, Reptilia, Amphibia, Osteichthyes and Chondrichthyes, supports our hypothesis that this widespread structural variant may represent an early evolved and conserved form of GnRH.     

No enhanced recognition memory,but better source memory for faces of cheaters

Previous studies sought to test for the existence of a “cheater-detection module” by testing for enhanced memory for the faces of cheaters, but past results have been inconclusive. Here, we present four experiments showing that old–new discrimination was not affected by whether a face was associated with a history of cheating, trustworthy or irrelevant behavior. In contrast, source memory for faces associated with a history of cheating (i.e., memory for the cheating context in which the face was encountered) was consistently better than source memory for other types of faces. This pattern held under a variety of conditions, including different types of judgments participants made about the stimulus persons (attractiveness in Experiment 1; likeability in Experiments 2–4), different retention intervals (a few minutes in Experiments 1, 2 and 4; 1 week in Experiment 3), whether the behaviors were exceptional or ordinary (Experiments 1–3) and whether the social status of the characters was low or high (Experiment 4). Given no differences in old–new discrimination, enhanced source memory for faces of cheaters may be useful for avoiding cheaters in future interactions.     

Picoplankton culture assessment using single strand conformation polymorphism and partial 18S sequencing

Environmental water samples were taken throughout 2001 fromfractioned water samples at the Helgoland time series site.The less than 3-µm fraction was inoculated into variousmedia. Serial dilutions from these inoculations produced a largenumber of rough cultures from which several hundred well-growingpicoplankton cultures were started. We established a combinationof crude DNA extraction, single strand conformation polymorphism(SSCP) fingerprinting and subsequent sequence analysis to screenthese large numbers of cultures, assess their purity/clonalityand determine their identity. Picoplankton species (i.e., cellssmaller than 3 µm) are difficult to distinguish becauseof their small size and the lack of morphological characters.Therefore, molecular techniques provide the most reliable methodto achieve their identification. Cultures were enriched forphotoautotroph cells, i.e., no carbon source was added, andcultures were grown in the light. From these cultures, crudeDNA was extracted, which was used for partial 18S polymerasechain reaction (PCR). On average, 50% of the cultures produceda PCR product. SSCP analysis of PCR products revealed the clonalityof a given culture. If clonal, then there was only a singleSSCP band; if not clonal, then there were multiple SSCP bands.Single SSCP bands were subsequently sequenced, and sequenceswere used to identify the culture. For this study, 300 cultureswere screened resulting in the identification of 63 potentiallyclonal cultures. These methods proved to be relatively easyto apply to assess the clonality and purity of the cultures.     

Infectious salmon anaemia virus (ISAV) isolated from the ISA disease outbreaks in Chile diverged from ISAV isolates from Norway around 1996 and was disseminated around 2005, based on surface glycoprotein gene sequences

Background

All viruses in the family Bunyaviridae possess a tripartite genome, consisting of a small, a medium, and a large RNA segment. Bunyaviruses therefore possess considerable evolutionary potential, attributable to both intramolecular changes and to genome segment reassortment. Hantaviruses (family Bunyaviridae, genus Hantavirus) are known to cause human hemorrhagic fever with renal syndrome or hantavirus pulmonary syndrome. The primary reservoir host of Sin Nombre virus is the deer mouse (Peromyscus maniculatus), which is widely distributed in North America. We investigated the prevalence of intramolecular changes and of genomic reassortment among Sin Nombre viruses detected in deer mice in three western states.

Methods

Portions of the Sin Nombre virus small (S) and medium (M) RNA segments were amplified by RT-PCR from kidney, lung, liver and spleen of seropositive peromyscine rodents, principally deer mice, collected in Colorado, New Mexico and Montana from 1995 to 2007. Both a 142 nucleotide (nt) amplicon of the M segment, encoding a portion of the G2 transmembrane glycoprotein, and a 751 nt amplicon of the S segment, encoding part of the nucleocapsid protein, were cloned and sequenced from 19 deer mice and from one brush mouse (P. boylii), S RNA but not M RNA from one deer mouse, and M RNA but not S RNA from another deer mouse.

Results

Two of 20 viruses were found to be reassortants. Within virus sequences from different rodents, the average rate of synonymous substitutions among all pair-wise comparisons (π_s) was 0.378 in the M segment and 0.312 in the S segment sequences. The replacement substitution rate (π_a) was 7.0 × 10^-4 in the M segment and 17.3 × 10^-4 in the S segment sequences. The low π_a relative to π_s suggests strong purifying selection and this was confirmed by a Fu and Li analysis. The absolute rate of molecular evolution of the M segment was 6.76 × 10^-3 substitutions/site/year. The absolute age of the M segment tree was estimated to be 37 years. In the S segment the rate of molecular evolution was 1.93 × 10^-3 substitutions/site/year and the absolute age of the tree was 106 years. Assuming that mice were infected with a single Sin Nombre virus genotype, phylogenetic analyses revealed that 10% (2/20) of viruses were reassortants, similar to the 14% (6/43) found in a previous report.

Conclusion

Age estimates from both segments suggest that Sin Nombre virus has evolved within the past 37–106 years. The rates of evolutionary changes reported here suggest that Sin Nombre virus M and S segment reassortment occurs frequently in nature.     

Key transitions in morphological development improve age estimates in white sturgeon Acipenser transmontanus

We reared white sturgeon Acipenser transmontanus under laboratory conditions and found that a random-forest model containing scute counts and total length predicted age significantly better than total length alone. Scute counts are rapid, inexpensive and non-lethal meristics to gather in the field. This technique could improve age estimates of imperilled sturgeon populations.