Neotyphodium lolii, a Fungal Leaf Endophyte, Reduces Fertility ofLolium perenneExposed to Elevated UV-B Radiation

Plants ofLolium perenne, grown with and without the balansoidfungal leaf endophyteNeotyphodium lolii, were exposed to threeultraviolet radiation treatments at an outdoor facility in theUK for 172 d. Plants were exposed to either (a) a 30% elevationabove the ambient erythemally-weighted level of UV-B (280–315nm) radiation under banks of cellulose diacetate filtered fluorescentlamps that also produce UV-A (315–400 nm) radiation (UV-B+A);(b) elevated UV-A radiation alone under banks of polyester filteredlamps; or (c) ambient levels of solar radiation under banksof unenergized lamps. The fertility of plants grown withN. loliiwassignificantly reduced by the elevated UV-B+A exposure. After172 d, these plants produced 70% fewer spikes, 75% fewer seeds,71% lower total weight of seed and 78% fewer seeds per g d.wt of plant tissue than plants colonized byN. loliiwhich wereexposed to ambient radiation. There was no discernible effectof elevated UV-B+A exposure on the fertility of endophyte-freeplants. Plants irradiated with UV-B+A developed 14% thickerleaves than those exposed to ambient radiation. Those whichwere irradiated with elevated UV-A alone produced seeds thatwere 20% heavier than plants exposed to ambient levels of radiation.Plants grown withN. loliihad 7% thicker leaves, 4% thicker stembases and 7% fewer tillers than those grown without it. Thefresh mass of tillers of plants grown withN. loliiwas 11% greaterthan those of endophyte-free plants, owing to their higher moisturecontents. These results suggest that the fertility ofL. perennecolonizedbyN. loliiin the natural environment could be deleteriouslyaffected by elevated fluxes of UV-B radiation associated withstratospheric ozone depletion and that this may affect the populationdynamics of the species.Copyright 1998 Annals of Botany Company Fungal leaf endophyte,Neotyphodium lolii, perennial ryegrass (Lolium perenne), stratospheric ozone depletion, UV-B radiation.     

Gene doctoring: a method for recombineering in laboratory and pathogenic Escherichia coli strains

Background  

Homologous recombination mediated by the λ-Red genes is a common method for making chromosomal modifications in Escherichia coli. Several protocols have been developed that differ in the mechanisms by which DNA, carrying regions homologous to the chromosome, are delivered into the cell. A common technique is to electroporate linear DNA fragments into cells. Alternatively, DNA fragments are generated in vivo by digestion of a donor plasmid with a nuclease that does not cleave the host genome. In both cases the λ-Red gene products recombine homologous regions carried on the linear DNA fragments with the chromosome. We have successfully used both techniques to generate chromosomal mutations in E. coli K-12 strains. However, we have had limited success with these λ-Red based recombination techniques in pathogenic E. coli strains, which has led us to develop an enhanced protocol for recombineering in such strains.     

Immobilization of Burkholderia cepacia in polyurethane-based foams: embedding efficiency and effect on bacterial activity

Immobilization of the trichloroethylene-degrading bacterium Burkholderia cepacia was evaluated using hydrophilic polyurethane foam. The influence of several foam formulation parameters upon cell retention was examined. Surfactant type was a major determinant of retention; a lecithin-based compound retained more cells than pluronic- or silicone-based surfactants. Excessive amounts of surfactant led to increased washout of bacteria. Increasing the biomass concentration in the foam from 4.8 to 10.5% dry weight per wet weight of foam resulted in fewer cells being washed out. Embedding at reduced temperature did not significantly affect retention, while the use of a silane binding agent gave inconsistent results. The optimal formulation retained all but 0.2% of total embedded cells during passage of 2 L of water through columns containing 2 g of foam. All foam formulations tested reduced the culturability of embedded cells by several orders of magnitude, but O₂ consumption and CO₂ evolution rates of embedded cells were never less than 50% of those of free cells. Nutrient amendments stimulated an increase in cell volume and ribosomal activity in immobilized cells as indicated by hybridization studies using fluorescently labeled ribosomal probes. These results indicate that, although immobilized cells were mostly nonculturable, they were metabolically active and thus could be used for biodegradation of toxic compounds. Received 23 December 1996/ Accepted in revised form 13 March 1997     

Restriction-map variation associated with the G6PD polymorphism in natural populations of Drosophila melanogaster

Restriction-map variation was studied in 126 copies of the G6pd region in X chromosome lines of Drosophila melanogaster from North America, Europe, and Africa. Special attention was focused on the distribution of variation relative to the geographically variable polymorphism for two electrophoretic variants. Nucleotide heterozygosity as determined by eight six-cutter restriction enzymes for the 13-kb region is estimated, on the basis of the worldwide sample, to be 0.065%, which is the lowest value reported for any comparable region in the D. melanogaster genome. Significant linkage disequilibrium between electrophoretic alleles and restriction-site variation is observed for several sites. In contrast to published studies of other genetic regions, there are large insertions that reach significant frequencies and are found across considerable geographic distances. There is a clustering of this variation inside the first large intervening sequence of the G6PD gene.      

Molecular evolution of the MAGUK family in metazoan genomes

Background  

Development, differentiation and physiology of metazoans all depend on cell to cell communication and subsequent intracellular signal transduction. Often, these processes are orchestrated via sites of specialized cell-cell contact and involve receptors, adhesion molecules and scaffolding proteins. Several of these scaffolding proteins important for synaptic and cellular junctions belong to the large family of membrane-associated guanylate kinases (MAGUK). In order to elucidate the origin and the evolutionary history of the MAGUKs we investigated full-length cDNA, EST and genomic sequences of species in major phyla.