Cladistic analyses of behavioural variation in wild Pan troglodytes: exploring the chimpanzee culture hypothesis

Long-term field studies have revealed considerable behavioural differences among groups of wild Pan troglodytes. Here, we report three sets of cladistic analyses that were designed to shed light on issues relating to this interpopulation variation that are of particular relevance to palaeoanthropology.In the first set of analyses, we focused on the proximate cause of the variation. Some researchers have argued that it is cultural, while others have suggested that it is the result of genetic differences. Because the eastern and western subspecies of P. troglodytes are well differentiated genetically while groups within the subspecies are not, we reasoned that if the genetic hypothesis is correct, the phylogenetic signal should be stronger when data from the eastern and western subspecies are analysed together compared to when data from only the eastern subspecies are analysed. Using randomisation procedures, we found that the phylogenetic signal was substantially stronger with in a single subspecies rather than with two. The results of the first sets of analyses, therefore, were inconsistent with the predictions of the genetic hypothesis.The other two sets of analyses built on the results of the first and assumed that the intergroup behavioural variation is cultural in nature. Recent work has shown that, contrary to what anthropologists and archaeologists have long believed, vertical intergroup transmission is often more important than horizontal intergroup transmission in human cultural evolution. In the second set of analyses, we sought to determine how important vertical transmission has been in the evolution of chimpanzee cultural diversity. The first analysis we carried out indicated that the intergroup similarities and differences in behaviour are consistent with the divergence of the western and eastern subspecies, which is what would be expected if vertical intergroup transmission has been the dominant process. In the second analysis, we found that the chimpanzee cultural data are not only comparable to a series of modern human cultural data sets in terms of how tree-like they are, but are also comparable to a series of genetic, anatomical, and behavioural data sets that can be assumed to have been produced by a branching process. Again, this is what would be expected if vertical inter-group transmission has been the dominant process in chimpanzee cultural evolution.Human culture has long been considered to be adaptive, but recent studies have suggested that this needs to be demonstrated rather than assumed. With this in mind, in the third set of analyses we investigated whether chimpanzee culture is adaptive. We found the hypothesis that chimpanzee culture is adaptive was supported by an analysis of data from the Eastern African subspecies, but not by an analysis of data from the eastern and western subspecies.The results of our analyses have implications for the number of subspecies in Pan troglodytes, the relationship between hominin taxa and Palaeolithic industries, and the evolution of hominin cognition and behaviour.     

Living archaeology: artefacts of specific nest site fidelity in wild chimpanzees

Savanna chimpanzees are known to re-use areas of the landscape for sleep, and patterns of chimpanzee sleeping site re-use are proposed as a referential model for early hominin archaeological site formation. We recorded the prevalence of deformed but healed branches and remnants of dead branches found around fresh nests at the savanna site of Issa in Ugalla, Tanzania. These old nest scars were found in 79% of 112 beds. We also randomly selected potential nesting locations for a subset of 32 beds within the same trees, and found nest scars in only 19% of these “control” locations. We then monitored 275 nests for up to 19 months for decay, regeneration of new branches, and re-use. Of these 275 nest locations, 24% were re-used within the first nine months of monitoring, and most re-use occurred when the nest had already decayed and was not easily visible from the ground. After 18 months, the proportion of specific nest positions re-used increased to 48%. This fidelity is likely a result of the creation of ideally-shaped support structures and supple new growth for mattress material with successive use of nest locations. We propose that specific nest site re-use may not be a direct product of environmental determination, but a result of “niche construction” through formation of good building sites within trees. Environmental modification through construction behaviour may have influenced both chimpanzee and early hominin ranging, and thus leaves behind recognisable patterns of artefact deposition across the landscape.     

Efficient production of germline transgenic chickens using lentiviral vectors

An effective method for genetic modification of chickens has yet to be developed. An efficient technology, enabling production of transgenic birds at high frequency and with reliable expression of transgenes, will have many applications, both in basic research and in biotechnology. We investigated the efficiency with which lentiviral vectors could transduce the chicken germ line and examined the expression of introduced reporter transgenes. Ten founder cockerels transmitted the vector to between 4% and 45% of their offspring and stable transmission to the G2 generation was demonstrated. Analysis of expression of reporter gene constructs in several transgenic lines showed a conserved expression profile between individuals that was maintained after transmission through the germ line. These data demonstrate that lentiviral vectors can be used to generate transgenic lines with an efficiency in the order of 100-fold higher than any previously published method, with no detectable silencing of transgene expression between generations.     

Evidence for control of nitrogen metabolism by a START-dependent mechanism in<Emphasis Type="Italic"> Saccharomyces cerevisiae</Emphasis>

It is generally thought that cell growth and metabolism regulate cell division and not vice versa. Here, we examined Saccharomyces cerevisiae cells growing under conditions of continuous culture in a chemostat. We found that loss of G1 cyclins, or inactivation of the cyclin-dependent kinase Cdc28p, reduced the activity of glutamate synthase (Glt1p), a key enzyme in nitrogen assimilation. We also present evidence indicating that the G1 cyclin-dependent control of Glt1p may involve Jem1p, a DnaJ-type chaperone. Our results suggest that completion of START may be linked to nitrogen metabolism.Communicated by C. P. Hollenberg     

Limiting the metabolic burden of recombinant protein expression during selection yields pools with higher expression levels

In order to avoid the metabolic burden of protein expression during cell growth, and to avoid potential toxicity of recombinant proteins, microbial expression systems typically utilize regulated expression vectors. In contrast, constitutive expression vectors have usually been utilized for isolation of protein expressing mammalian cell lines. In mammalian systems, inducible expression vectors are typically utilized for only those proteins that are toxic when overexpressed. We developed a tetracycline regulated expression system in CHO cells, and show that cell pools selected in the uninduced state recover faster than those selected in the induced state even though the proteins showed no apparent toxicity or expression instability. Furthermore, cell pools selected in the uninduced state had higher expression levels when protein expression was turned on only in production cultures compared to pools that were selected and maintained in the induced state through production. We show a titer improvement of greater than twofold for an Fc-fusion protein and greater than 50% improvement for a recombinant antibody. The improvement is primarily due to an increase in specific productivity. Recombinant protein mRNA levels correlate strongly with protein expression levels and are highest in those cultures selected in the uninduced state and only induced during production. These data are consistent with a model where CHO cell lines with constitutive expression select for subclones with lower expression levels.     

Plant Species with Potential as Food,Nesting Material,or Tools at a Chimpanzee Refuge Site in Caddo Parish,Louisiana

Surplus chimpanzees live in research laboratories where they will likely remain for the rest of their lives. An alternative to laboratory housing is an outdoor enclosure in a warm climate. Before construction, researchers should conduct a vegetation survey because chimpanzees use vegetation daily. Chimp Haven, Inc. is developing a chimpanzee sanctuary in Caddo Parish, Louisiana, and we conducted a vegetation survey at the site to 1) characterize the abundance and structure of vegetation; 2) identify plants with utility as food, nesting material, or tools; 3) determine the abundance and distribution of useful vegetation; and 4) identify any possibly hazardous vegetation. We established 48 plots, quantified the woody vegetation, and identified potentially useful and hazardous plant species from the published literature. Vegetation at the site was secondary growth from logging of loblolly pine (Pinus taeda), the most abundant tree. Other abundant trees included oak (Quercus spp.), elm (Ulmus spp.), sweetgum (Liquidambar styraciflua), and maple (Acer spp.). Small plants (1–9.9 m tall) constituted 95% of all vegetation. Forty-one of 64 plant species have edible vegetative parts, while 35 species have edible reproductive parts. We identified 55 potential nesting trees by size (dbh ≥ 25 cm) and 4 species used as tools by captive great apes. Useful vegetation was concentrated in areas with topographic relief or in a floodplain, while flat areas with fields had less. We recommend that the floodplain be cropped for fruit and browse and enclosures encompass areas with relief and fields, creating a diverse habitat.