Correlations between fitness and heterozygosity at allozyme and microsatellite loci in the Atlantic salmon, Salmo salar L

The relationship between heterozygosity at genetic markers (six allozyme and eight microsatellite loci), and fluctuating asymmetry (FA), length and weight was investigated in two samples of Atlantic salmon (Salmo salar L.) with different timings of first active feeding (early (EA) and late (LA) salmon). This trait had previously been related to fitness. EA fish show smaller values of FA, are longer, heavier and are more heterozygous at allozyme loci than are conspecific LA fish. Also within both samples, heterozygosity at allozyme loci was inversely related to FA and was positively related to weight and length. However, no significant differences in microsatellite diversity (heterozygosity and mean d2 measurements) were observed between samples (EA vs LA). Furthermore, no association was observed between the variability at microsatellite loci and FA, weight or length within each sample. These results suggest that allozyme loci, in themselves, influence fitness components, rather than associations arising from associative overdominance.     

The influence of copper exposure on predator-prey interactions in aquatic insect communities

SUMMARY. 1. Vulnerability of two species of net-spinning caddisflies (Chimarra sp. and Hydropsyche morosa) to predation by the stonefly, Paragnetina media , was significantly greater in experimental streams dosed with copper (target concentration=6 μg 1^-1) than in control streams.
2. Results of stomach analyses showed that Hydropsychidae was the major component of stonefly diets in experimental streams and that the number of Hydropsychidae per stonefly gut was significantly greater in dosed streams than controls.
3. Since these results could not be predicted using single species bioassays, we suggest that such simple tests be supplemented with more environmentally realistic procedures that account for species interactions.     

Effects of Landscape Composition on Winter Survival of Northern Bobwhites

Abstract: In a manipulative experiment, we tested effects of select elements of landscape structure and composition on winter survival of northern bobwhites (Colinus virginianus) at Ames Plantation, Tennessee, USA. We hypothesized that abundance of closed canopy forested habitats (52% of the landscape) on Ames diminished usable space for bobwhite and provided usable space for a suite of important predators, thereby contributing to low winter survival. To test this hypothesis we divided a 2,217-ha portion of the property into 4 approximately equal areas. We altered landscape structure and composition by converting approximately 33% of the timber to early successional herbaceous plant communities on 2 treatment sites, which reduced percentage of landscape and edge density of closed canopy forest and increased percentage of landscape in early successional herbaceous communities, and left 2 control sites in their former composition. During one pretreatment year (1998–1999) and 3 posttreatment years (1999–2000, 2000–2001, 2001–2002), we estimated winter (15 Oct-10 Apr) survival on treatment and control sites from a radiomarked sample of 920 bobwhites. We used Cox Proportional Hazard models to test for effects of treatment (forest conversion) and covariates describing landscape structure and composition (% closed canopy forest, % early successional herbaceous, wooded edge density) on winter survival at multiple spatial scales. Winter survival on the treatment sites pooled across the 4 winter seasons was 41% compared to 32% for control sites. Additionally, for each 1 m/ha increase in closed canopy woods edge density within winter covey ranges, risk of mortality increased 0.3%. Our results suggest composition at the landscape scale and landscape structure at the local scale influence winter survival of bobwhite. Management strategies that alter composition and structure and increase usable space may be effective in mitigating winter mortality thereby altering population trajectories. Typical bobwhite management plans focus on improving quality of herbaceous vegetation structure within existing herbaceous patches, however, population processes may work at larger spatial scales influencing design and implementation of conservation programs.     

Phylogeography of the marine macroalga Sargassum hemiphyllum (Phaeophyceae,Heterokontophyta) in northwestern Pacific

Sargassum hemiphyllum is commonly found in Japan and Korea, with a variety, var. chinense, that is found distributed in the southern Chinese coast. We previously reported distinct genetic differentiation between the two taxa based on the PCR‐RFLP data of plastid RubiscoL‐S spacer. The present study aims at elucidating the phylogeographic pattern of S. hemiphyllum based on more markers in the nuclear and extranuclear genomes, with a view to reveal the occurrence of hybridization. The two allopatrically distributed taxa were found to be genetically distinct in nuclear ITS2, plastidial Rubisco (Rbc) and mitochondrial TrnW_I (Trn) spacers. Their divergence was postulated to be attributable to the vicariant event which resulted from the isolation of the Sea of Japan during the late Miocene (6.58–11.25 Mya). Divergence within both S. hemiphyllum and the chinense variety was observed based on Trn spacer, while the divergence in S. hemiphyllum was further confirmed in Rbc spacer. This divergence appears to correspond to the separation of the Japanese populations between the Sea of Japan and the Pacific that occurred around 0.92–2.88 Mya (the early Pleistocene). The presence of an ITS2 clone resembling var. chinense sequences in a Japanese population of S. hemiphyllum (JpNS) raises the possibility of the introgression of var. chinense individuals into S. hemiphyllum population. Compared to that between S. hemiphyllum and the chinense variety, hybridization among the Japanese and Korean populations of S. hemiphyllum is highly probable as all these individuals share a pool of nuclear ITS2 sequences, possibly attributable to incomplete concerted evolution of ITS2.     

Determining the optimum temperature and salinity for larval culture,and describing a culture protocol for the conservation aquaculture for European smelt Osmerus eperlanus (L.)

Populations of anadromous European smelt Osmerus eperlanus (L.) are declining across its geographical range in northern Europe, but no practical culture techniques exist to develop stock enhancement programmes for this species. In this study, a culture protocol is described to rear fish from fertilised eggs to mature adults in 2 years involving the use of ‘green water’, live feed and artificial diets. The sequence of embryonic development for eggs incubated at 10°C/0 ppt was described and photographed. To determine the optimum conditions for larval culture, fertilised eggs were reared at a range of salinities (0–20 ppt) and temperatures (5–18°C) until first feeding. Best hatching success (ca. 97%), size at hatch (ca. 0.8 mm) and survival to first feeding (ca. 96%) of larvae were achieved under combined conditions of low salinity (0–0 ppt) and temperature (5–10°C). No larvae survived a salinity of 20 ppt. The time taken from fertilisation to hatch (FtH) and hatching duration (HD) were temperature-dependent ranging from 42 days FtH and 10 days HD at 5ºC, to 10 days FtH and 2 days HD at 18°C irrespective of salinity. The results indicate that conservation programmes could utilise existing salmonid hatchery facilities (i.e. freshwater, ≤10°C water temperature) for stock enhancement. Since on-growing of smelt involves the logistical and technical problems of live feed production, it is recommended that smelt enhancement programme utilise freshwater hatchery facilities to rear fish until hatching, and then stock out onto known spawning grounds in rivers allowing hatched larvae to drift into estuaries to complete the larval and juvenile phases. This approach would minimise the time spent in the hatchery post-hatching, eliminate the need for live food production, prevent the development of predator-naïve fish, and hence would mimic the natural life cycle of the species as closely as possible.     

Thermostable continuous coupled assay for measuring glucose using glucokinase and glucose-6-phosphate dehydrogenase from the marine hyperthermophile Thermotoga maritima

A novel, thermostable adaptation of the coupled-enzyme assay for monitoring glucose concentrations was developed for an optimal temperature of 85 degrees C. This is the first report of a thermostable glucostat from a marine hyperthermophile. The continuous assay, using glucokinase (Glk) and glucose-6-phosphate dehydrogenase (Gpd) from Thermotoga maritima, demonstrated robust activity over a range of temperatures (75-90 degrees C) and pH values (6.8- 8.5). Purified glucokinase had a monomeric molecular mass of 33.8kDa while that of glucose-6-phosphate dehydrogenase (D-glucose 6-phosphate:NADP oxidoreductase) was 57.5kDa. The high-temperature assay provided a method for directly assaying the activity of another hyperthermophilic enzyme, 1,4-beta-D-glucan glucohydrolase (GghA) from Thermotoga neapolitana. To provide a benchmark for protein-engineering experiments involving GghA, a three-enzyme continuous assay (performed at 85 degrees C), linking wild-type GghA, Glk, and Gpd, measured glucose produced from GghA's hydrolysis of cellobiose, one of GghA's secondary substrates. The assay established the kinetic behavior of wild-type GghA toward cellobiose and was used to screen for changes in the catalytic efficiency of variant GghA(s) induced by random mutagenesis. The assay's development will allow high-throughput screening of other thermostable glucose-producing enzymes, including those applicable to commercial biomass conversion.     

DISSIMILARITIES IN COGNITION OF FLAVOUR TERMS RELATED TO VARIOUS SENSORY LABORATORIES IN A MULTIVARIATE STUDY

A study of dissimilarities in cognitive perception of 20 common flavor terms was carried out by the Sensory Group of Norway. An average cognitive pattern of the flavor terms was revealed from multidimensional scaling (MDS) and cluster analysis (CLU). In general, small but interesting deviations between different sensory laboratories working with various food products were found by a multivariate pattern recognition technique based on principal component analysis (PCA). Suggestions for finding general reference standards for flavor terms are discussed.