Lost in translation – a history of systematic confusion and comments on the type species of Squalodon and Patriocetus (Cetacea,Odontoceti)

Abstract: The two odontocete taxa Squalodon grateloupii and Patriocetus ehrlichii, both the type species of their respective genera, have been at the centre of a great deal of taxonomic confusion. Originally regarded to be conspecific, these two taxa have been the subject of a bewildering taxonomic debate lasting for more than a century, which recently led to the suggestion to abandon these widely used names and replace S. grateloupii with the similar, yet independently and later proposed name S. gratelupi as the type species of Squalodon. Here, we attempt to summarise the events leading to the current confused situation in the hope of resolving this issue once and for all and argue that the name Squalodon grateloupii, as originally proposed, should be reinstated.     

Phosphorus status determines biomass response to elevated CO2 in a legume : C4 grass community

Thirty-six mesocosms, each containing a two-species community of Trifolium repens (C₃ legume) and Stenotaphrum secundatum (C₄ grass), were grown in sand with three nutrient regimes, zero N low P, zero N high P and supplied N high P, under ambient (aCO₂) and twice ambient CO₂ (eCO₂) for 15 months in two greenhouses. Aboveground annual production in the P limited mesocosms did not respond to eCO₂ and was reduced by 50% relative to mesocosms with an adequate P supply, where dry-matter production was increased by 12–24% under eCO₂. The stimulation of production by eCO₂ occurred throughout the year despite a clear seasonality in growth. There was no effect of eCO₂ on leaf area index (LAI), which was larger under high P than low P. Live root mass at the end of the experiment was higher under eCO₂ in all nutrient treatments, but the response of total belowground C (root+soil) to eCO₂ depended on P treatment. Under limiting P, belowground C was not significantly changed by eCO₂ (2–2.3 t belowground C ha⁻¹). Under high P supply, both root and soil C pools increased under eCO₂. Under aCO₂, low P supply increased belowground C by 0.7–1 t C ha⁻¹ above that added by the high P treatment. P is commonly limiting in Australian ecosystems and the majority of ecosystem N input is provided by biological N fixation. Consequently, the response of legumes to eCO₂ is of particular importance. These results demonstrate that at low P availability, there is likely to be only a limited response of biomass production by T. repens to eCO₂, which in turn may constrain any ecosystem response.     

Effects of cultured astroglia on the survival of neonatal rat retinal ganglion cells in vitro

Retinal ganglion cells (RGC), as identified by retrograde horseradish peroxidase (HRP) labeling technique, were cultured in a minimal medium; only 20% of them survived after 16 hr in vitro. However, superior colliculus-conditioned medium was capable of supporting 100% of RGC over this assay time; enhanced neurite expression also was evident. It was decided to investigate whether glial cells within the superior colliculus may provide a soluble factor capable of supporting RGC. Glial-conditioned medium prepared over monolayers of either predominantly flat astrocytes (relatively immature) or predominantly process-bearing (mature) astrocytes failed to maintain RGC. The possibility that astrocytes may provide support for RGC via membrane contact was then investigated. Dissociated retinae were grown on monolayers consisting primarily of either flat or process-bearing astrocytes. Cultures rich in flat astrocytes maintained over 70% of RGC originally present, and many of them exhibited extensive neurite outgrowth and elongation. Process-bearing astrocytes were unable to support RGC survival. Immature astroglial cells may therefore support RGC via glial-neuronal interaction.     

Dorsal and ventral rentinoic territories defined by retinoic acid synthesis, break-down and nuclear receptor expression.

Determination of the dorso-ventral dimension of the vertebrate retina is known to involve retinoic acid (RA), in that high RA activates expression of a ventral retinaldehyde dehydrogenase and low RA of a dorsal dehydrogenase. Here we show that in the early eye vesicle of the mouse embryo, expression of the dorsal dehydrogenase is preceded by, and transiently overlaps with, the RA-degrading oxidase creating a trough between very high ventral and moderately high dorsal RA levels. Most of the RA receptors are expressed uniformly throughout the retina except for the RA-sensitive RARbeta, which is down-regulated in the CYP26 stripe. The orphan receptor COUP-TFII, which modulates RA responses, colocalizes with the dorsal dehydrogenase. The organization of the embryonic vertebrate retina into dorsal ventral territories divided by a horizontal boundary has parallels to the division of the Drosophila eye disc into dorsal, equatorial and ventral zones, indicating that the similarities in eye morphogenesis extend beyond single molecules to topographical patterns.     

Release method evaluation for swift fox reintroduction at Bad River Ranches in South Dakota

Reintroductions have increasingly become effective at restoring populations of imperiled native wildlife. How animals are reintroduced into unfamiliar environments may have pronounced impacts on behavior, survival, and reproduction. We evaluated the influence of four release methods on survival rates of translocated swift foxes at Bad River Ranches (BRR) in western South Dakota: (1) hard‐release, (2) short‐soft‐release, (3) long‐soft‐release, and (4) captive born. A total of 179 foxes captured in Wyoming during 2002–2007 and in Colorado during 2006–2007 were released into BRR and the surrounding area. In addition, 43 pups born to foxes in the long‐soft‐release category were also released. All release methods incorporated a 14‐ to 21‐day quarantine period. Hard‐release foxes were released directly from a transport kennel, whereas short‐soft‐release foxes were released from soft‐release pens by opening the door and allowing the foxes to leave voluntarily. Long‐soft‐release foxes were held for more than 250 days on‐site in soft‐release pens through the winter and released in the following year in early summer. During 2002–2007, survival of reintroduced foxes differed significantly (p < 0.05) by age (adult vs. juvenile), release year, and release method. The short‐soft‐release method had the highest 60‐day post‐release survival probability compared with the other release methods. We did not detect any differences in mortality hazards between wild‐born and short‐soft‐release foxes. Reintroduction programs based on short‐soft‐releases are useful for restoring or augmenting populations to advance the conservation of the swift fox.     

Mitochondrial mislocalization and altered assembly of a cluster of Barth syndrome mutant tafazzins

None of the 28 identified point mutations in tafazzin (Taz1p), which is the mutant gene product associated with Barth syndrome (BTHS), has a biochemical explanation. In this study, endogenous Taz1p was localized to mitochondria in association with both the inner and outer mitochondrial membranes facing the intermembrane space (IMS). Unexpectedly, Taz1p does not contain transmembrane (TM) segments. Instead, Taz1p membrane association involves a segment that integrates into, but not through, the membrane bilayer. Residues 215-232, which were predicted to be a TM domain, were identified as the interfacial membrane anchor by modeling four distinct BTHS mutations that occur at conserved residues within this segment. Each Taz1p mutant exhibits altered membrane association and is nonfunctional. However, the basis for Taz1p dysfunction falls into the following two categories: (1) mistargeting to the mitochondrial matrix or (2) correct localization associated with aberrant complex assembly. Thus, BTHS can be caused by mutations that alter Taz1p sorting and assembly within the mitochondrion, indicating that the lipid target of Taz1p is resident to IMS-facing leaflets.     

Vesicle trafficking maintains nuclear shape in Saccharomyces cerevisiae during membrane proliferation

The parameters that control nuclear size and shape are poorly understood. In yeast, unregulated membrane proliferation, caused by deletion of the phospholipid biosynthesis inhibitor SPO7, leads to a single nuclear envelope "flare" that protrudes into the cytoplasm. This flare is always associated with the asymmetrically localized nucleolus, which suggests that the site of membrane expansion is spatially confined by an unknown mechanism. Here we show that in spo7Δ cells, mutations in vesicle-trafficking genes lead to multiple flares around the entire nucleus. These mutations also alter the distribution of small nucleolar RNA-associated nucleolar proteins independently of their effect on nuclear shape. Both single- and multi-flared nuclei have increased nuclear envelope surface area, yet they maintain the same nuclear/cell volume ratio as wild-type cells. These data suggest that, upon membrane expansion, the spatial confinement of the single nuclear flare is dependent on vesicle trafficking. Moreover, flares may facilitate maintenance of a constant nuclear/cell volume ratio in the face of altered membrane proliferation.     

Golgin-160 promotes cell surface expression of the beta-1 adrenergic receptor

Golgin-160 is a ubiquitously expressed peripheral Golgi membrane protein that is important for transduction of certain pro-apoptotic signals at the Golgi complex. However, the role of golgin-160 in normal Golgi structure and function is unknown. Here, we show that depletion of golgin-160 using RNA interference (RNAi) does not affect Golgi morphology or constitutive membrane traffic in HeLa cells. However, depletion of golgin-160 leads to significantly decreased cell surface levels of exogenously expressed beta1-adrenergic receptor (beta1AR), which can be rescued by expression of RNAi-resistant forms of golgin-160. Furthermore, overexpression of golgin-160 leads to higher surface levels of beta1AR. Golgin-160 is localized mostly in the cis and medial regions of the Golgi stack by immunoelectron microscopy, suggesting that it does not directly promote incorporation of beta1AR into transport vesicles at the trans Golgi network. Golgin-160 interacts with beta1AR in vitro, and we mapped the interaction to a region between residues 140 and 257 in the head of golgin-160 and the third intracellular loop of beta1AR. Our results support the idea that golgin-160 may promote efficient surface delivery of a subset of cargo molecules.