Biocontrol of strawberry fruit infected by Botrytis cinerea: Effects on the microbial communities on fruit assessed by next‐generation sequencing

Fruit grey mould, caused by the fungus Botrytis cinerea, is known to be a harmful disease of strawberry at postharvest stage. However, effects of an application of biological control agents (BCAs) on strawberry fruit in terms of shift in the microbial community are still unknown. The present research aimed to investigate the effects of an application of BCAs on postharvest microbial populations present on strawberry fruits. Strawberry plants were sprayed with three kinds of BCA, RhizoVital 42 fl. (Bacillus amyloliquefaciens FZB42), Trianum‐P (Trichoderma harzianum T22) and Naturalis (Beauveria bassiana ATCC 74040), targeting Botrytis cinerea fungus. Control plots were composed of water and fungicide treatments. Microbial communities (bacteria and fungi) were analysed via next‐generation sequencing on an Illumina MiSeq. Analysis of 16S RNA and ITS rRNA sequences indicated that the BCAs application modified both bacterial and fungal community compositions and diversity. An application of two BCAs together had more effects on microbial community composition than a single application. These results suggest that BCAs can modify bacterial and fungal community composition and diversity on strawberry fruits, which may consequently improve the efficiency and establishment of these products on control of postharvest diseases of fruits, such as grey mould.     

Decrease in glutathione (GSH) content in bovine sperm after cryopreservation: comparison between two extenders

Growing evidence suggests that among the causes which deteriorate qualitative and functional characteristics of semen after freezing and thawing, there are those linked to oxidative stress and decrease detoxification of antioxidants present in the cells and seminal plasma. Overall, cryopreservation reduces the spermatozoal GSH content. In the present study we assessed the motility, capacitation status, ability to undergo acrosome reaction and levels of GSH in bovine spermatozoa after freezing and thawing, and compared the effects of the egg yolk tris-citrate and a commercial extenders (Bioxcell). Six semen samples were collected from each of five bulls and frozen and thawed in the two extenders. The level of total GSH of bovine spermatozoa detected in the raw semen ranged from 246.5 to 776.2 pmoles/mg of protein. The Bioxcell extender was superior in preserving GSH content (647.2+/-300.1 versus 223.6+/-154.0 pmoles/mL; P<0.05), motility levels (44.3+/-4.8 versus 41.8+/-4.0%; P<0.05), non-capacitated state (68.3+/-13.6 versus 61.3+/-17%; P<0.05) and a lower proportion of acrosome reacted spermatozoa post thaw (3.8+/-2.1 versus 6.3+/-3.1%; P<0.001) compared to egg yolk tris-citrate extender. These findings could be partially ascribed to the high GSH level contained in the commercial extender which seem able to alleviate oxidative damages to spermatozoa surviving freezing thawing procedures. Further researches are required in order to validate in vivo these results.     

The extent of linkage disequilibrium in a large cattle population of western Africa and its consequences for association studies

Several previous studies concluded that linkage disequilibrium (LD) in livestock populations from developed countries originated from the impact of strong selection. Here, we assessed the extent of LD in a cattle population from western Africa that was bred in an extensive farming system. The analyses were performed on 363 individuals in a Bos indicus x Bos taurus population using 42 microsatellite markers on BTA04, BTA07 and BTA13. A high level of expected heterozygosity (0.71), a high mean number of alleles per locus (9.7) and a mild shift in Hardy-Weinberg equilibrium were found. Linkage disequilibrium extended over shorter distances than what has been observed in cattle from developed countries. Effective population size was assessed using two methods; both methods produced large values: 1388 when considering heterozygosity (assuming a mutation rate of 10(-3)) and 2344 when considering LD on whole linkage groups (assuming a constant population size over generations). However, analysing the decay of LD as a function of marker spacing indicated a decreasing trend in effective population size over generations. This decrease could be explained by increasing selective pressure and/or by an admixture process. Finally, LD extended over small distances, which suggested that whole-genome scans will require a large number of markers. However, association studies using such populations will be effective.     

Les fistules péniennes après circoncision: A propos de 20 observations

Complications of traditional circumcision are very common. Their treatment is uneasy. We have performed a retrospective study including 20 cases of urethral fistula. Mean age was 4 years (ranged 2–12 years). They were referred to us in a mean time of 2 years. The main clinical outcome was penopreputial urethral fistula. 14 patients underwent uretrorraphy with end to end suture while 6 had a one-stage penile cutaneous stand flap. The results were good in 11 cases. 5 patients had recurrence of the fistula and 4 were suffering from dysuria. Need for more attention during homeostasis and preputial dissection owing to the difficulties of surgical treatment of such lesions.     

IkappaB kinase beta promotes cell survival by antagonizing p53 functions through DeltaNp73alpha phosphorylation and stabilization

ΔNp73α, a dominant-negative inhibitor of p53 and p73, exhibits antiapoptotic and transforming activity in in vitro models and is often found to be upregulated in human cancers. The mechanisms involved in the regulation of ΔNp73α protein levels in normal and cancer cells are poorly characterized. Here, we show that that IκB kinase beta (IKKβ) increases ΔNp73α protein stability independently of its ability to activate NF-κB. IKKβ associates with and phosphorylates ΔNp73α at serine 422 (S422), leading to its accumulation in the nucleus, where it binds and represses several p53-regulated genes. S422A mutation in ΔNp73α abolished IKKβ-mediated stabilization and inhibition of p53-regulated gene expression. Inhibition of IKKβ activity by chemical inhibitors, overexpression of dominant-negative mutants, or gene silencing by siRNA also resulted in ΔNp73α destabilization, which under these conditions was rapidly translocated into the cytoplasm and degraded by a calpain-mediated mechanism. We also present evidence for the IKKβ and ΔNp73α cross talk in cancer-derived cell lines and primary cancers. Our data unveil a new mechanism involved in the regulation of the p73 and p53 network.     

Use of a Cholera Rapid Diagnostic Test during a Mass Vaccination Campaign in Response to an Epidemic in Guinea, 2012

Background

During the 2012 cholera outbreak in the Republic of Guinea, the Ministry of Health, supported by Médecins Sans Frontières - Operational Center Geneva, used the oral cholera vaccine Shanchol as a part of the emergency response. The rapid diagnostic test (RDT) Crystal VC, widely used during outbreaks, detects lipopolysaccharide antigens of Vibrio cholerae O1 and O139, both included in Shanchol. In the context of reactive use of a whole-cell cholera vaccine in a region where cholera cases have been reported, it is essential to know what proportion of vaccinated individuals would be reactive to the RDT and for how long after vaccination.

Methodology/Principal Findings

A total of 108 vaccinated individuals, selected systematically among all persons older than one year, were included at vaccination sites and 106 were included in the analysis. Stools samples of this cohort of vaccinated participants were collected and tested with the RDT every day until the test was negative for two consecutive visits or for a maximum of 7 days. A total of 94.3% of cholera vaccine recipients had a positive test after vaccination; all except one of these positive results were reactive only with the O139 antigen. The mean time to become negative in those with an initial positive result after vaccination was 3.8 days, standard deviation 1.1 days.

Conclusions/Significance

The RDT Crystal VC becomes positive in persons recently vaccinated against cholera, although almost exclusively to the O139 antigen. This reactivity largely disappeared within five days after vaccination. These results suggest that the test can be used normally as soon as 24 hours after vaccination in a context of O1 epidemics, which represent the vast majority of cases, and after a period of five days in areas where V. cholerae O139 is present. The reason why only O139 test line became positive remains to be investigated.     

Pollen from archaeological layers and cultural landscape reconstruction: Case studies from the Bradano valley (Basilicata,southern Italy)

Abstract

The article aims at presenting some aspects of environmental reconstruction through pollen analysis from archaeological contexts. The anthropogenic pollen transport into archaeological sites is regarded as an interesting tool to improve knowledge on flora and vegetation in the area of influence of sites. The zoophilous plants can be found more easily than in the regional airborne pollen rain where anemophilous pollen is generally overrepresented. Moreover, pollen from archaeological contexts is mainly a result of the cultural landscape shaped by human activities. Two case studies from the Bradano Valley (Basilicata, southern Italy), rich in archaeological sites dating altogether from the Middle Bronze Age to the Medieval age, are reported. Difesa San Biagio and its surroundings is one of the biggest settlements of the area, settled in early times by Enotrians. Altojanni is an extended area mainly frequented in Hellenistic, Roman late Imperial and Medieval times. A very open landscape, and clear signs of plant exploitation and cultivation, breeding and settlements were present in the two sites. Though samples are disturbed and preservation problems are sometimes observed, the main characters of pollen spectra are recurrent. High percentages of Poaceae and Cichorioideae, together with coprophilous fungal spores, strongly suggest a long tradition of pastoral activities. These case study examples suggest that human activities would have produced a fairly xeric environment.     

Seasonal decline of the tomato leafminer,Tuta absoluta,in the shifting landscape of a vegetable‐growing area

Insect pest populations exhibit seasonal dynamics in response to changes in resource availability or other environmental factors such as climatic conditions, natural enemies, and intra‐ or interspecific competition. Understanding such dynamics is critical for developing effective integrated pest management strategies. The objective of the present study was to identify factors driving the seasonal decline of the tomato leafminer, Tuta absoluta (Meyrick) (Lepidoptera: Gelechiidae), in the shifting landscape of a vegetable‐growing area in Senegal. A set of 42 tomato fields was monitored for the number of T. absoluta adults caught in pheromone traps and for the incidence of larvae, during 5 months from June to November 2016 in the Niayes area (Senegal). The surface of solanaceous host crops, climatic conditions, and abundance of natural enemies were also monitored. A drastic decline in T. absoluta abundance was observed during the rainy season. The decrease in resource availability, especially tomato crops, in the surrounding landscape of monitored fields was the main factor affecting the population dynamics during the rainy season. However, alternative host crops such as eggplant and Ethiopian eggplant, can provide ‘reservoirs’ for residual populations of the pest. For applied purpose, it would be interesting to focus the management efforts on residual populations during the rainy season, to make more difficult the reconstitution of populations during the dry season.